RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 TTC39BQ5VTQ0 682 aaPredicted RBP8.44□□□□□ -1.06
UBR4-202ENST00000375224 OTUD1Q5VV17 481 aaPredicted RBP8.44□□□□□ -1.06
UBR4-202ENST00000375224 RFX8Q6ZV50 586 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 BEND5Q7L4P6 421 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 CAND1Q86VP6 1230 aaKnown RBP8.44□□□□□ -1.06
UBR4-202ENST00000375224 LRRC6Q86X45 466 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 C4orf33Q8N1A6 199 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 SMYD1Q8NB12 490 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 LRRC8CQ8TDW0 803 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 NDRG1Q92597 394 aaKnown RBP8.44□□□□□ -1.06
UBR4-202ENST00000375224 CFAP36Q96G28 342 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 PITPNM3Q9BZ71 974 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 MLXIPLQ9NP71 852 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 DMAP1Q9NPF5 467 aaPredicted RBP8.44□□□□□ -1.06
UBR4-202ENST00000375224 TUBA8Q9NY65 449 aaPredicted RBP8.44□□□□□ -1.06
UBR4-202ENST00000375224 FBXW11Q9UKB1 542 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 TMCO1Q9UM00 188 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 PHF24Q9UPV7 400 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 ZNF510Q9Y2H8 683 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 L3MBTL1Q9Y468 752 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 TIMM13Q9Y5L4 95 aaPredicted RBP8.44□□□□□ -1.06
UBR4-202ENST00000375224 TDRD15B5MCY1 1934 aaKnown RBP8.44□□□□□ -1.06
UBR4-202ENST00000375224 SYNJ2BP-COX16A0A087WUM0 186 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 TMEM88BA6NKF7 163 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 FOXO6A8MYZ6 492 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 NRP1O14786 923 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 INPPL1O15357 1258 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 MGRN1O60291 552 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 MAP3K6O95382 1288 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 OAS1P00973 400 aaKnown RBP8.44□□□□□ -1.06
UBR4-202ENST00000375224 TAC1P20366 129 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 CCND3P30281 292 aaPredicted RBP8.44□□□□□ -1.06
UBR4-202ENST00000375224 CYP2C18P33260 490 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 MAGEA3P43357 314 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 WDR4P57081 412 aaKnown RBP8.44□□□□□ -1.06
UBR4-202ENST00000375224 SP3Q02447 781 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 PRKD1Q15139 912 aaPredicted RBP8.44□□□□□ -1.06
UBR4-202ENST00000375224 SYPL2Q5VXT5 272 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 CYS1Q717R9 158 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 TRPM8Q7Z2W7 1104 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 IGDCC3Q8IVU1 814 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 PYROXD2Q8N2H3 581 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 C3orf58Q8NDZ4 430 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 MYLPFQ96A32 169 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 MTBPQ96DY7 904 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 EBNA1BP2Q99848 306 aaKnown RBP8.44□□□□□ -1.06
UBR4-202ENST00000375224 NAT9Q9BTE0 207 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 PIGVQ9NUD9 493 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 COX16Q9P0S2 106 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 KLHL14Q9P2G3 628 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.44□□□□□ -1.06
UBR4-202ENST00000375224 DPPA5A6NC42 116 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 YJEFN3A6XGL0 299 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 E7ENQ6 273 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 SUPT3HO75486 399 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 FAM155BO75949 473 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 METTL18O95568 372 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 EOMESO95936 686 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 POMCP01189 267 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 APOEP02649 317 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 USP17L7P0C7H9 530 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 MX2P20592 715 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 PRKCHP24723 683 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 SERPINB6P35237 376 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 RPA3P35244 121 aaPredicted RBP8.44□□□□□ -1.06
UBR4-202ENST00000375224 SERPINB9P50453 376 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 TPI1P60174 286 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 AP1B1Q10567 949 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 NOGQ13253 232 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 DPYSQ14117 519 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 PARP6Q2NL67 630 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 FAXCQ5TGI0 409 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 PM20D1Q6GTS8 502 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 C4orf50Q6ZRC1 276 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 ECHDC2Q86YB7 292 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 ZMIZ2Q8NF64 920 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 GSDMBQ8TAX9 411 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 SUSD3Q96L08 255 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 NR1H4Q96RI1 486 aaPredicted RBP8.44□□□□□ -1.06
UBR4-202ENST00000375224 OSBPL7Q9BZF2 842 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 DDIT4Q9NX09 232 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.44□□□□□ -1.06
UBR4-202ENST00000375224 STARD13Q9Y3M8 1113 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 TSC2P49815 1807 aa8.43□□□□□ -1.06
UBR4-202ENST00000375224 A0A1W2PPM1 405 aa8.43□□□□□ -1.06
UBR4-202ENST00000375224 A6NHS1 94 aa8.43□□□□□ -1.06
UBR4-202ENST00000375224 HHLA1C9JL84 531 aa8.43□□□□□ -1.06
UBR4-202ENST00000375224 MFSD11O43934 449 aa8.43□□□□□ -1.06
UBR4-202ENST00000375224 MGEA5O60502 916 aa8.43□□□□□ -1.06
UBR4-202ENST00000375224 SNRPAP09012 282 aaKnown RBP8.43□□□□□ -1.06
UBR4-202ENST00000375224 ABL2P42684 1182 aa8.43□□□□□ -1.06
UBR4-202ENST00000375224 AFF1P51825 1210 aaKnown RBP8.43□□□□□ -1.06
UBR4-202ENST00000375224 TRIM32Q13049 653 aa8.43□□□□□ -1.06
UBR4-202ENST00000375224 EFTUD2Q15029 972 aaKnown RBP eCLIP8.43□□□□□ -1.061e-10■■■■■ 27.9
UBR4-202ENST00000375224 RCN1Q15293 331 aa8.43□□□□□ -1.06
UBR4-202ENST00000375224 OVOS1Q6IE37 1185 aa8.43□□□□□ -1.06
UBR4-202ENST00000375224 HFE2Q6ZVN8 426 aa8.43□□□□□ -1.06
UBR4-202ENST00000375224 ZBTB8BQ8NAP8 495 aaPredicted RBP8.43□□□□□ -1.06
UBR4-202ENST00000375224 COLGALT1Q8NBJ5 622 aa8.43□□□□□ -1.06
UBR4-202ENST00000375224 CCNYQ8ND76 341 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms