RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 RARAP10276 462 aa11.72□□□□□ -0.53
HSPG2-202ENST00000374676 TCF4P15884 667 aa11.72□□□□□ -0.53
HSPG2-202ENST00000374676 CD72P21854 359 aa11.72□□□□□ -0.53
HSPG2-202ENST00000374676 GGCXP38435 758 aa11.72□□□□□ -0.53
HSPG2-202ENST00000374676 GRIA2P42262 883 aa11.72□□□□□ -0.53
HSPG2-202ENST00000374676 DGKGP49619 791 aa11.72□□□□□ -0.53
HSPG2-202ENST00000374676 CDH4P55283 916 aa11.72□□□□□ -0.53
HSPG2-202ENST00000374676 GRSF1Q12849 480 aaKnown RBP eCLIP11.72□□□□□ -0.53
HSPG2-202ENST00000374676 PON2Q15165 354 aa11.72□□□□□ -0.53
HSPG2-202ENST00000374676 IFI16Q16666 785 aaKnown RBP11.72□□□□□ -0.53
HSPG2-202ENST00000374676 DGKKQ5KSL6 1271 aa11.72□□□□□ -0.53
HSPG2-202ENST00000374676 FAM72AQ5TYM5 149 aa11.72□□□□□ -0.53
HSPG2-202ENST00000374676 LRRC38Q5VT99 294 aa11.72□□□□□ -0.53
HSPG2-202ENST00000374676 DAB2IPQ5VWQ8 1189 aa11.72□□□□□ -0.53
HSPG2-202ENST00000374676 GRAMD4Q6IC98 578 aa11.72□□□□□ -0.53
HSPG2-202ENST00000374676 FAM72DQ6L9T8 149 aa11.72□□□□□ -0.53
HSPG2-202ENST00000374676 C11orf63Q6NUN7 778 aa11.72□□□□□ -0.53
HSPG2-202ENST00000374676 NUDT18Q6ZVK8 323 aa11.72□□□□□ -0.53
HSPG2-202ENST00000374676 POLNQ7Z5Q5 900 aa11.72□□□□□ -0.53
HSPG2-202ENST00000374676 KIAA0907Q7Z7F0 614 aaPredicted RBP11.72□□□□□ -0.53
HSPG2-202ENST00000374676 FAM72BQ86X60 149 aa11.72□□□□□ -0.53
HSPG2-202ENST00000374676 CCDC117Q8IWD4 279 aaPredicted RBP11.72□□□□□ -0.53
HSPG2-202ENST00000374676 CFAP52Q8N1V2 620 aa11.72□□□□□ -0.53
HSPG2-202ENST00000374676 PYROXD2Q8N2H3 581 aa11.72□□□□□ -0.53
HSPG2-202ENST00000374676 SYNPOQ8N3V7 929 aa11.72□□□□□ -0.53
HSPG2-202ENST00000374676 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.72□□□□□ -0.53
HSPG2-202ENST00000374676 BHMTQ93088 406 aa11.72□□□□□ -0.53
HSPG2-202ENST00000374676 SNRNP25Q9BV90 132 aaKnown RBP11.72□□□□□ -0.53
HSPG2-202ENST00000374676 MAGEB5Q9BZ81 275 aa11.72□□□□□ -0.53
HSPG2-202ENST00000374676 KCNF1Q9H3M0 494 aa11.72□□□□□ -0.53
HSPG2-202ENST00000374676 FBRSL1Q9HCM7 1045 aaKnown RBP11.72□□□□□ -0.53
HSPG2-202ENST00000374676 ARHGEF4Q9NR80 690 aa11.72□□□□□ -0.53
HSPG2-202ENST00000374676 STIM2Q9P246 746 aa11.72□□□□□ -0.53
HSPG2-202ENST00000374676 CLEC4EQ9ULY5 219 aa11.72□□□□□ -0.53
HSPG2-202ENST00000374676 ALG6Q9Y672 507 aa11.72□□□□□ -0.53
HSPG2-202ENST00000374676 CACNA1IQ9P0X4 2223 aa11.71□□□□□ -0.53
HSPG2-202ENST00000374676 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.71□□□□□ -0.53
HSPG2-202ENST00000374676 FAM170BA6NMN3 283 aa11.71□□□□□ -0.53
HSPG2-202ENST00000374676 NCAM2O15394 837 aa11.71□□□□□ -0.53
HSPG2-202ENST00000374676 KRT86O43790 486 aa11.71□□□□□ -0.53
HSPG2-202ENST00000374676 GPR37L1O60883 481 aa11.71□□□□□ -0.53
HSPG2-202ENST00000374676 SRGAP2O75044 1071 aa11.71□□□□□ -0.53
HSPG2-202ENST00000374676 CNTN5O94779 1100 aa11.71□□□□□ -0.53
HSPG2-202ENST00000374676 LRIG2O94898 1065 aa11.71□□□□□ -0.53
HSPG2-202ENST00000374676 KAT7O95251 611 aa11.71□□□□□ -0.53
HSPG2-202ENST00000374676 APODP05090 189 aa11.71□□□□□ -0.53
HSPG2-202ENST00000374676 KRT7P08729 469 aa11.71□□□□□ -0.53
HSPG2-202ENST00000374676 CHRNB1P11230 501 aa11.71□□□□□ -0.53
HSPG2-202ENST00000374676 TARSP26639 723 aaKnown RBP11.71□□□□□ -0.53
HSPG2-202ENST00000374676 HOXC13P31276 330 aa11.71□□□□□ -0.53
HSPG2-202ENST00000374676 SSR1P43307 286 aaKnown RBP11.71□□□□□ -0.53
HSPG2-202ENST00000374676 TNFRSF4P43489 277 aa11.71□□□□□ -0.53
HSPG2-202ENST00000374676 HCAR3P49019 387 aa11.71□□□□□ -0.53
HSPG2-202ENST00000374676 CLCN5P51795 746 aa11.71□□□□□ -0.53
HSPG2-202ENST00000374676 OXCT1P55809 520 aa11.71□□□□□ -0.53
HSPG2-202ENST00000374676 TAS2R40P59535 323 aa11.71□□□□□ -0.53
HSPG2-202ENST00000374676 ZNF177Q13360 481 aaPredicted RBP11.71□□□□□ -0.53
HSPG2-202ENST00000374676 FZD5Q13467 585 aa11.71□□□□□ -0.53
HSPG2-202ENST00000374676 SLC12A1Q13621 1099 aa11.71□□□□□ -0.53
HSPG2-202ENST00000374676 CCINQ13939 588 aa11.71□□□□□ -0.53
HSPG2-202ENST00000374676 DPYSL2Q16555 572 aa11.71□□□□□ -0.53
HSPG2-202ENST00000374676 CA9Q16790 459 aa11.71□□□□□ -0.53
HSPG2-202ENST00000374676 FBXO43Q4G163 708 aa11.71□□□□□ -0.53
HSPG2-202ENST00000374676 NAIF1Q69YI7 327 aaPredicted RBP11.71□□□□□ -0.53
HSPG2-202ENST00000374676 TXNRD3NBQ6F5E7 133 aa11.71□□□□□ -0.53
HSPG2-202ENST00000374676 ASTLQ6HA08 431 aaPredicted RBP11.71□□□□□ -0.53
HSPG2-202ENST00000374676 FSTL4Q6MZW2 842 aa11.71□□□□□ -0.53
HSPG2-202ENST00000374676 CPNE8Q86YQ8 564 aa11.71□□□□□ -0.53
HSPG2-202ENST00000374676 MFN1Q8IWA4 741 aa11.71□□□□□ -0.53
HSPG2-202ENST00000374676 CCAR2Q8N163 923 aaKnown RBP11.71□□□□□ -0.53
HSPG2-202ENST00000374676 CARNMT1Q8N4J0 409 aa11.71□□□□□ -0.53
HSPG2-202ENST00000374676 CCDC26Q8TAB7 109 aa11.71□□□□□ -0.53
HSPG2-202ENST00000374676 FAM71BQ8TC56 605 aa11.71□□□□□ -0.53
HSPG2-202ENST00000374676 CLDN23Q96B33 292 aa11.71□□□□□ -0.53
HSPG2-202ENST00000374676 TBC1D31Q96DN5 1066 aa11.71□□□□□ -0.53
HSPG2-202ENST00000374676 LMLNQ96KR4 655 aa11.71□□□□□ -0.53
HSPG2-202ENST00000374676 ZNF830Q96NB3 372 aaPredicted RBP11.71□□□□□ -0.53
HSPG2-202ENST00000374676 KCTD15Q96SI1 283 aaPredicted RBP11.71□□□□□ -0.53
HSPG2-202ENST00000374676 EPAS1Q99814 870 aa11.71□□□□□ -0.53
HSPG2-202ENST00000374676 TSGA10Q9BZW7 698 aa11.71□□□□□ -0.53
HSPG2-202ENST00000374676 ZYG11BQ9C0D3 744 aa11.71□□□□□ -0.53
HSPG2-202ENST00000374676 MFSD1Q9H3U5 465 aa11.71□□□□□ -0.53
HSPG2-202ENST00000374676 DHX35Q9H5Z1 703 aaKnown RBP11.71□□□□□ -0.53
HSPG2-202ENST00000374676 GPATCH2LQ9NWQ4 482 aa11.71□□□□□ -0.53
HSPG2-202ENST00000374676 ZNF212Q9UDV6 495 aa11.71□□□□□ -0.53
HSPG2-202ENST00000374676 TBC1D30Q9Y2I9 924 aa11.71□□□□□ -0.53
HSPG2-202ENST00000374676 STARD13Q9Y3M8 1113 aa11.71□□□□□ -0.53
HSPG2-202ENST00000374676 A0A0U1RQJ8 604 aa11.7□□□□□ -0.54
HSPG2-202ENST00000374676 TBC1D3BA6NDS4 549 aa11.7□□□□□ -0.54
HSPG2-202ENST00000374676 TMEM110-MUSTN1A8MSY1 372 aa11.7□□□□□ -0.54
HSPG2-202ENST00000374676 WASH4PA8MWX3 477 aa11.7□□□□□ -0.54
HSPG2-202ENST00000374676 H0Y626 953 aa11.7□□□□□ -0.54
HSPG2-202ENST00000374676 STK25O00506 426 aa11.7□□□□□ -0.54
HSPG2-202ENST00000374676 TRIM24O15164 1050 aa11.7□□□□□ -0.54
HSPG2-202ENST00000374676 TIMM44O43615 452 aa11.7□□□□□ -0.54
HSPG2-202ENST00000374676 BUB1O43683 1085 aa11.7□□□□□ -0.54
HSPG2-202ENST00000374676 PDGFBP01127 241 aaPredicted RBP11.7□□□□□ -0.54
HSPG2-202ENST00000374676 RHOQP17081 205 aa11.7□□□□□ -0.54
HSPG2-202ENST00000374676 AOC1P19801 751 aa11.7□□□□□ -0.54
HSPG2-202ENST00000374676 COMTP21964 271 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms