RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 NCOR2Q9Y618 2525 aa18.08■□□□□ 0.49
PFDN6-201ENST00000374606 KRBA1A5PL33 1030 aa18.08■□□□□ 0.48
PFDN6-201ENST00000374606 C3orf70A6NLC5 250 aaPredicted RBP18.08■□□□□ 0.48
PFDN6-201ENST00000374606 CREB3O43889 395 aa18.08■□□□□ 0.48
PFDN6-201ENST00000374606 LATS1O95835 1130 aa18.08■□□□□ 0.48
PFDN6-201ENST00000374606 PTPN7P35236 360 aa18.08■□□□□ 0.48
PFDN6-201ENST00000374606 GGCXP38435 758 aa18.08■□□□□ 0.48
PFDN6-201ENST00000374606 PAFAH1B1P43034 410 aa18.08■□□□□ 0.48
PFDN6-201ENST00000374606 TPI1P60174 286 aa18.08■□□□□ 0.48
PFDN6-201ENST00000374606 CKAP4Q07065 602 aaKnown RBP18.08■□□□□ 0.48
PFDN6-201ENST00000374606 PUM1Q14671 1186 aaKnown RBP eCLIP18.08■□□□□ 0.481e-7■■■■□ 20.2
PFDN6-201ENST00000374606 WHAMMP3Q1A5X7 153 aa18.08■□□□□ 0.48
PFDN6-201ENST00000374606 ACBD5Q5T8D3 534 aaPredicted RBP18.08■□□□□ 0.48
PFDN6-201ENST00000374606 CHSY1Q86X52 802 aa18.08■□□□□ 0.48
PFDN6-201ENST00000374606 DENND1CQ8IV53 801 aa18.08■□□□□ 0.48
PFDN6-201ENST00000374606 RASGEF1CQ8N431 466 aa18.08■□□□□ 0.48
PFDN6-201ENST00000374606 TTC16Q8NEE8 873 aa18.08■□□□□ 0.48
PFDN6-201ENST00000374606 MS4A14Q96JA4 679 aa18.08■□□□□ 0.48
PFDN6-201ENST00000374606 NAP1L3Q99457 506 aaPredicted RBP18.08■□□□□ 0.48
PFDN6-201ENST00000374606 OSBPL8Q9BZF1 889 aa18.08■□□□□ 0.48
PFDN6-201ENST00000374606 SIK2Q9H0K1 926 aa18.08■□□□□ 0.48
PFDN6-201ENST00000374606 SMG9Q9H0W8 520 aaKnown RBP18.08■□□□□ 0.48
PFDN6-201ENST00000374606 RNF14Q9UBS8 474 aa18.08■□□□□ 0.48
PFDN6-201ENST00000374606 OR12D3Q9UGF7 316 aa18.08■□□□□ 0.48
PFDN6-201ENST00000374606 CA14Q9ULX7 337 aa18.08■□□□□ 0.48
PFDN6-201ENST00000374606 SNX10Q9Y5X0 201 aa18.08■□□□□ 0.48
PFDN6-201ENST00000374606 hCG_1818297A0A087WSY0 165 aa18.07■□□□□ 0.48
PFDN6-201ENST00000374606 ZNF487B1APH4 448 aa18.07■□□□□ 0.48
PFDN6-201ENST00000374606 LEFTY2O00292 366 aa18.07■□□□□ 0.48
PFDN6-201ENST00000374606 EEF2KO00418 725 aaKnown RBP18.07■□□□□ 0.48
PFDN6-201ENST00000374606 ACSL4O60488 711 aa18.07■□□□□ 0.48
PFDN6-201ENST00000374606 PRAMEF12O95522 483 aa18.07■□□□□ 0.48
PFDN6-201ENST00000374606 FGGP02679 453 aa18.07■□□□□ 0.48
PFDN6-201ENST00000374606 SRFP11831 508 aa18.07■□□□□ 0.48
PFDN6-201ENST00000374606 NRG1Q02297 640 aaPredicted RBP18.07■□□□□ 0.48
PFDN6-201ENST00000374606 MMRN1Q13201 1228 aa18.07■□□□□ 0.48
PFDN6-201ENST00000374606 SEMA3BQ13214 749 aa18.07■□□□□ 0.48
PFDN6-201ENST00000374606 LLGL1Q15334 1064 aa18.07■□□□□ 0.48
PFDN6-201ENST00000374606 LONRF2Q1L5Z9 754 aa18.07■□□□□ 0.48
PFDN6-201ENST00000374606 MS4A13Q5J8X5 152 aa18.07■□□□□ 0.48
PFDN6-201ENST00000374606 PIK3R6Q5UE93 754 aa18.07■□□□□ 0.48
PFDN6-201ENST00000374606 KAZNQ674X7 775 aa18.07■□□□□ 0.48
PFDN6-201ENST00000374606 SLC13A5Q86YT5 568 aaPredicted RBP18.07■□□□□ 0.48
PFDN6-201ENST00000374606 RFX6Q8HWS3 928 aa18.07■□□□□ 0.48
PFDN6-201ENST00000374606 CREG2Q8IUH2 290 aa18.07■□□□□ 0.48
PFDN6-201ENST00000374606 ZSCAN18Q8TBC5 510 aaPredicted RBP18.07■□□□□ 0.48
PFDN6-201ENST00000374606 ACTRT1Q8TDG2 376 aa18.07■□□□□ 0.48
PFDN6-201ENST00000374606 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.07■□□□□ 0.48
PFDN6-201ENST00000374606 SH3RF2Q8TEC5 729 aa18.07■□□□□ 0.48
PFDN6-201ENST00000374606 RSAD2Q8WXG1 361 aa18.07■□□□□ 0.48
PFDN6-201ENST00000374606 TSC1Q92574 1164 aa18.07■□□□□ 0.48
PFDN6-201ENST00000374606 FGF13Q92913 245 aa18.07■□□□□ 0.48
PFDN6-201ENST00000374606 USP13Q92995 863 aaPredicted RBP18.07■□□□□ 0.48
PFDN6-201ENST00000374606 NXPE3Q969Y0 559 aa18.07■□□□□ 0.48
PFDN6-201ENST00000374606 AZIN2Q96A70 460 aa18.07■□□□□ 0.48
PFDN6-201ENST00000374606 ZSWIM3Q96MP5 696 aa18.07■□□□□ 0.48
PFDN6-201ENST00000374606 CSPG4P5Q96PW8 444 aa18.07■□□□□ 0.48
PFDN6-201ENST00000374606 MAGEB5Q9BZ81 275 aa18.07■□□□□ 0.48
PFDN6-201ENST00000374606 KIF9Q9HAQ2 790 aa18.07■□□□□ 0.48
PFDN6-201ENST00000374606 TDP1Q9NUW8 608 aa18.07■□□□□ 0.48
PFDN6-201ENST00000374606 GDE1Q9NZC3 331 aa18.07■□□□□ 0.48
PFDN6-201ENST00000374606 EPS15L1Q9UBC2 864 aa18.07■□□□□ 0.48
PFDN6-201ENST00000374606 TTC7AQ9ULT0 858 aaPredicted RBP18.07■□□□□ 0.48
PFDN6-201ENST00000374606 FAM72CH0Y354 149 aa18.06■□□□□ 0.48
PFDN6-201ENST00000374606 DAPK3O43293 454 aa18.06■□□□□ 0.48
PFDN6-201ENST00000374606 LRIG2O94898 1065 aa18.06■□□□□ 0.48
PFDN6-201ENST00000374606 KLKB1P03952 638 aa18.06■□□□□ 0.48
PFDN6-201ENST00000374606 KRT10P13645 584 aa18.06■□□□□ 0.48
PFDN6-201ENST00000374606 GOT1P17174 413 aa18.06■□□□□ 0.48
PFDN6-201ENST00000374606 HTR7P34969 479 aa18.06■□□□□ 0.48
PFDN6-201ENST00000374606 ZXDBP98169 803 aa18.06■□□□□ 0.48
PFDN6-201ENST00000374606 USP4Q13107 963 aa18.06■□□□□ 0.48
PFDN6-201ENST00000374606 TAZQ16635 292 aa18.06■□□□□ 0.48
PFDN6-201ENST00000374606 FAM72AQ5TYM5 149 aa18.06■□□□□ 0.48
PFDN6-201ENST00000374606 RAP1GAP2Q684P5 730 aa18.06■□□□□ 0.48
PFDN6-201ENST00000374606 FAM72DQ6L9T8 149 aa18.06■□□□□ 0.48
PFDN6-201ENST00000374606 RFX8Q6ZV50 586 aa18.06■□□□□ 0.48
PFDN6-201ENST00000374606 ANKS1BQ7Z6G8 1248 aa18.06■□□□□ 0.48
PFDN6-201ENST00000374606 FAM72BQ86X60 149 aa18.06■□□□□ 0.48
PFDN6-201ENST00000374606 ARID3BQ8IVW6 561 aaPredicted RBP18.06■□□□□ 0.48
PFDN6-201ENST00000374606 WBP2Q969T9 261 aa18.06■□□□□ 0.48
PFDN6-201ENST00000374606 FAF2Q96CS3 445 aa18.06■□□□□ 0.48
PFDN6-201ENST00000374606 TBC1D31Q96DN5 1066 aa18.06■□□□□ 0.48
PFDN6-201ENST00000374606 C1orf74Q96LT6 269 aa18.06■□□□□ 0.48
PFDN6-201ENST00000374606 DDX50Q9BQ39 737 aaKnown RBP18.06■□□□□ 0.48
PFDN6-201ENST00000374606 HEMGNQ9BXL5 484 aa18.06■□□□□ 0.48
PFDN6-201ENST00000374606 MAK16Q9BXY0 300 aaKnown RBP18.06■□□□□ 0.48
PFDN6-201ENST00000374606 SMARCAL1Q9NZC9 954 aa18.06■□□□□ 0.48
PFDN6-201ENST00000374606 CWC15Q9P013 229 aaKnown RBP18.06■□□□□ 0.48
PFDN6-201ENST00000374606 AGO1Q9UL18 857 aaKnown RBP18.06■□□□□ 0.48
PFDN6-201ENST00000374606 CDH7Q9ULB5 785 aa18.06■□□□□ 0.48
PFDN6-201ENST00000374606 CCL26Q9Y258 94 aa18.06■□□□□ 0.48
PFDN6-201ENST00000374606 EFR3BQ9Y2G0 817 aa18.06■□□□□ 0.48
PFDN6-201ENST00000374606 FANCMQ8IYD8 2048 aa18.06■□□□□ 0.48
PFDN6-201ENST00000374606 DNAH14Q0VDD8 3507 aa18.06■□□□□ 0.48
PFDN6-201ENST00000374606 DOCK8Q8NF50 2099 aa18.05■□□□□ 0.48
PFDN6-201ENST00000374606 E9PAM4 449 aa18.05■□□□□ 0.48
PFDN6-201ENST00000374606 F5H5T6 163 aa18.05■□□□□ 0.48
PFDN6-201ENST00000374606 TJP3O95049 919 aa18.05■□□□□ 0.48
PFDN6-201ENST00000374606 TACR2P21452 398 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms