RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.42■□□□□ 0.54
PHF1-201ENST00000374512 PPM1HQ9ULR3 514 aa18.42■□□□□ 0.54
PHF1-201ENST00000374512 CDY2AQ9Y6F7 541 aa18.42■□□□□ 0.54
PHF1-201ENST00000374512 CDY1Q9Y6F8 540 aa18.42■□□□□ 0.54
PHF1-201ENST00000374512 RALGAPA2Q2PPJ7 1873 aa18.42■□□□□ 0.54
PHF1-201ENST00000374512 RBM47A0AV96 593 aaKnown RBP18.42■□□□□ 0.54
PHF1-201ENST00000374512 LYPLA1O75608 230 aaPredicted RBP18.42■□□□□ 0.54
PHF1-201ENST00000374512 RALBP11234 206 aa18.42■□□□□ 0.54
PHF1-201ENST00000374512 VAV1P15498 845 aa18.42■□□□□ 0.54
PHF1-201ENST00000374512 TFE3P19532 575 aaPredicted RBP18.42■□□□□ 0.54
PHF1-201ENST00000374512 KCNA4P22459 653 aa18.42■□□□□ 0.54
PHF1-201ENST00000374512 ACAT1P24752 427 aaKnown RBP18.42■□□□□ 0.54
PHF1-201ENST00000374512 PDK1Q15118 436 aa18.42■□□□□ 0.54
PHF1-201ENST00000374512 THEMIS2Q5TEJ8 643 aa18.42■□□□□ 0.54
PHF1-201ENST00000374512 METTL21CQ5VZV1 264 aa18.42■□□□□ 0.54
PHF1-201ENST00000374512 LRRN4Q8WUT4 740 aa18.42■□□□□ 0.54
PHF1-201ENST00000374512 TOP3BO95985 862 aaKnown RBP18.41■□□□□ 0.54
PHF1-201ENST00000374512 TYK2P29597 1187 aa18.41■□□□□ 0.54
PHF1-201ENST00000374512 MAGEA12P43365 314 aa18.41■□□□□ 0.54
PHF1-201ENST00000374512 SLC25A3Q00325 362 aa18.41■□□□□ 0.54
PHF1-201ENST00000374512 FAM182AQ5T1J6 154 aa18.41■□□□□ 0.54
PHF1-201ENST00000374512 ACAD11Q709F0 780 aa18.41■□□□□ 0.54
PHF1-201ENST00000374512 C10orf107Q8IVU9 208 aa18.41■□□□□ 0.54
PHF1-201ENST00000374512 CRYBG2Q8N1P7 616 aa18.41■□□□□ 0.54
PHF1-201ENST00000374512 GSTCDQ8NEC7 633 aa18.41■□□□□ 0.54
PHF1-201ENST00000374512 SREK1Q8WXA9 508 aaKnown RBP18.41■□□□□ 0.54
PHF1-201ENST00000374512 SSX2IPQ9Y2D8 614 aa18.41■□□□□ 0.54
PHF1-201ENST00000374512 ZNF195O14628 629 aa18.41■□□□□ 0.54
PHF1-201ENST00000374512 H2AFYO75367 372 aaKnown RBP18.41■□□□□ 0.54
PHF1-201ENST00000374512 PIM1P11309 404 aaPredicted RBP18.41■□□□□ 0.54
PHF1-201ENST00000374512 MGAT1P26572 445 aa18.41■□□□□ 0.54
PHF1-201ENST00000374512 ADORA2AP29274 412 aa18.41■□□□□ 0.54
PHF1-201ENST00000374512 ADCYAP1R1P41586 468 aa18.41■□□□□ 0.54
PHF1-201ENST00000374512 RBBP5Q15291 538 aaKnown RBP18.41■□□□□ 0.54
PHF1-201ENST00000374512 GRIK4Q16099 956 aa18.41■□□□□ 0.54
PHF1-201ENST00000374512 PDPK2PQ6A1A2 396 aa18.41■□□□□ 0.54
PHF1-201ENST00000374512 PDSS2Q86YH6 399 aa18.41■□□□□ 0.54
PHF1-201ENST00000374512 CCDC185Q8N715 623 aa18.41■□□□□ 0.54
PHF1-201ENST00000374512 IGSF9Q9P2J2 1179 aa18.41■□□□□ 0.54
PHF1-201ENST00000374512 FZD10Q9ULW2 581 aa18.41■□□□□ 0.54
PHF1-201ENST00000374512 SCN4AP35499 1836 aa18.4■□□□□ 0.54
PHF1-201ENST00000374512 RNF103O00237 685 aa18.4■□□□□ 0.54
PHF1-201ENST00000374512 PRKCGP05129 697 aa18.4■□□□□ 0.54
PHF1-201ENST00000374512 CPA3P15088 417 aa18.4■□□□□ 0.54
PHF1-201ENST00000374512 GOT1P17174 413 aa18.4■□□□□ 0.54
PHF1-201ENST00000374512 MATKP42679 507 aa18.4■□□□□ 0.54
PHF1-201ENST00000374512 ZBTB6Q15916 424 aa18.4■□□□□ 0.54
PHF1-201ENST00000374512 MAP3K21Q5TCX8 1036 aa18.4■□□□□ 0.54
PHF1-201ENST00000374512 UNC5BQ8IZJ1 945 aa18.4■□□□□ 0.54
PHF1-201ENST00000374512 BEST2Q8NFU1 509 aa18.4■□□□□ 0.54
PHF1-201ENST00000374512 OR6B3Q8NGW1 331 aa18.4■□□□□ 0.54
PHF1-201ENST00000374512 CDH22Q9UJ99 828 aa18.4■□□□□ 0.54
PHF1-201ENST00000374512 PCDHB12Q9Y5F1 795 aa18.4■□□□□ 0.54
PHF1-201ENST00000374512 TMEM114B3SHH9 223 aa18.39■□□□□ 0.54
PHF1-201ENST00000374512 SPRP35270 261 aaPredicted RBP18.39■□□□□ 0.54
PHF1-201ENST00000374512 SERPINB8P50452 374 aa18.39■□□□□ 0.54
PHF1-201ENST00000374512 SESN2P58004 480 aaPredicted RBP18.39■□□□□ 0.54
PHF1-201ENST00000374512 ASPHQ12797 758 aa18.39■□□□□ 0.54
PHF1-201ENST00000374512 SOWAHAQ2M3V2 549 aa18.39■□□□□ 0.54
PHF1-201ENST00000374512 SLC25A52Q3SY17 297 aa18.39■□□□□ 0.54
PHF1-201ENST00000374512 MAVSQ7Z434 540 aa18.39■□□□□ 0.54
PHF1-201ENST00000374512 RASSF3Q86WH2 238 aa18.39■□□□□ 0.54
PHF1-201ENST00000374512 PIP4K2CQ8TBX8 421 aa18.39■□□□□ 0.54
PHF1-201ENST00000374512 CERS2Q96G23 380 aa18.39■□□□□ 0.54
PHF1-201ENST00000374512 P2RY11Q96G91 374 aa18.39■□□□□ 0.54
PHF1-201ENST00000374512 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.39■□□□□ 0.54
PHF1-201ENST00000374512 UNCXA6NJT0 531 aa18.39■□□□□ 0.53
PHF1-201ENST00000374512 MEI4A8MW99 385 aa18.39■□□□□ 0.53
PHF1-201ENST00000374512 PEX1O43933 1283 aa18.39■□□□□ 0.53
PHF1-201ENST00000374512 MARCH8Q5T0T0 291 aa18.39■□□□□ 0.53
PHF1-201ENST00000374512 LGMNQ99538 433 aa18.39■□□□□ 0.53
PHF1-201ENST00000374512 KLHL4Q9C0H6 718 aa18.39■□□□□ 0.53
PHF1-201ENST00000374512 PNPOQ9NVS9 261 aa18.39■□□□□ 0.53
PHF1-201ENST00000374512 SNTG2Q9NY99 539 aa18.39■□□□□ 0.53
PHF1-201ENST00000374512 TMEM216Q9P0N5 145 aa18.39■□□□□ 0.53
PHF1-201ENST00000374512 ARHGAP26Q9UNA1 814 aa18.39■□□□□ 0.53
PHF1-201ENST00000374512 SLC45A1Q9Y2W3 748 aa18.39■□□□□ 0.53
PHF1-201ENST00000374512 RAD54BQ9Y620 910 aa18.39■□□□□ 0.53
PHF1-201ENST00000374512 EME2A4GXA9 379 aaPredicted RBP18.38■□□□□ 0.53
PHF1-201ENST00000374512 MPOP05164 745 aa18.38■□□□□ 0.53
PHF1-201ENST00000374512 HK2P52789 917 aa18.38■□□□□ 0.53
PHF1-201ENST00000374512 ATXN1P54253 815 aaKnown RBP18.38■□□□□ 0.53
PHF1-201ENST00000374512 FOXB2Q5VYV0 432 aa18.38■□□□□ 0.53
PHF1-201ENST00000374512 ZNF467Q7Z7K2 595 aaPredicted RBP18.38■□□□□ 0.53
PHF1-201ENST00000374512 PHC3Q8NDX5 983 aa18.38■□□□□ 0.53
PHF1-201ENST00000374512 SNX27Q96L92 541 aa18.38■□□□□ 0.53
PHF1-201ENST00000374512 ZMAT2Q96NC0 199 aaKnown RBP18.38■□□□□ 0.53
PHF1-201ENST00000374512 KCNK16Q96T55 309 aa18.38■□□□□ 0.53
PHF1-201ENST00000374512 LRRC40Q9H9A6 602 aa18.38■□□□□ 0.53
PHF1-201ENST00000374512 NME7Q9Y5B8 376 aa18.38■□□□□ 0.53
PHF1-201ENST00000374512 PSAT1Q9Y617 370 aa18.38■□□□□ 0.53
PHF1-201ENST00000374512 KPNA7A9QM74 516 aa18.38■□□□□ 0.53
PHF1-201ENST00000374512 PDHXO00330 501 aa18.38■□□□□ 0.53
PHF1-201ENST00000374512 PPEF2O14830 753 aa18.38■□□□□ 0.53
PHF1-201ENST00000374512 STRNO43815 780 aa18.38■□□□□ 0.53
PHF1-201ENST00000374512 UBTFL6P0CB48 400 aaPredicted RBP18.38■□□□□ 0.53
PHF1-201ENST00000374512 CRADDP78560 199 aa18.38■□□□□ 0.53
PHF1-201ENST00000374512 IFRD2Q12894 506 aaPredicted RBP18.38■□□□□ 0.53
PHF1-201ENST00000374512 CCNIQ14094 377 aa18.38■□□□□ 0.53
PHF1-201ENST00000374512 PAFAH1B3Q15102 231 aaKnown RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms