RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 RNF168Q8IYW5 571 aaPredicted RBP17.37■□□□□ 0.37
PTPN20-203ENST00000374342 AGGF1Q8N302 714 aaeCLIP17.37■□□□□ 0.37
PTPN20-203ENST00000374342 RIBC1Q8N443 379 aaPredicted RBP17.37■□□□□ 0.37
PTPN20-203ENST00000374342 MCUQ8NE86 351 aa17.37■□□□□ 0.37
PTPN20-203ENST00000374342 MDM1Q8TC05 714 aa17.37■□□□□ 0.37
PTPN20-203ENST00000374342 TRIM43Q96BQ3 446 aaPredicted RBP17.37■□□□□ 0.37
PTPN20-203ENST00000374342 HDAC11Q96DB2 347 aa17.37■□□□□ 0.37
PTPN20-203ENST00000374342 RABEP2Q9H5N1 569 aa17.37■□□□□ 0.37
PTPN20-203ENST00000374342 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.37■□□□□ 0.37
PTPN20-203ENST00000374342 KLHL8Q9P2G9 620 aaPredicted RBP17.37■□□□□ 0.37
PTPN20-203ENST00000374342 HS3ST4Q9Y661 456 aa17.37■□□□□ 0.37
PTPN20-203ENST00000374342 MRPL42Q9Y6G3 142 aaKnown RBP17.37■□□□□ 0.37
PTPN20-203ENST00000374342 TEX264Q9Y6I9 313 aa17.37■□□□□ 0.37
PTPN20-203ENST00000374342 DOCK4Q8N1I0 1966 aa17.36■□□□□ 0.37
PTPN20-203ENST00000374342 SLC38A8A6NNN8 435 aa17.36■□□□□ 0.37
PTPN20-203ENST00000374342 KCNU1A8MYU2 1149 aa17.36■□□□□ 0.37
PTPN20-203ENST00000374342 FGF10O15520 208 aaPredicted RBP17.36■□□□□ 0.37
PTPN20-203ENST00000374342 HSPA8P11142 646 aaKnown RBP17.36■□□□□ 0.37
PTPN20-203ENST00000374342 RAG1P15918 1043 aa17.36■□□□□ 0.37
PTPN20-203ENST00000374342 LSP1P33241 339 aa17.36■□□□□ 0.37
PTPN20-203ENST00000374342 GARSP41250 739 aaKnown RBP17.36■□□□□ 0.37
PTPN20-203ENST00000374342 PSEN1P49768 467 aa17.36■□□□□ 0.37
PTPN20-203ENST00000374342 RASIP1Q5U651 963 aa17.36■□□□□ 0.37
PTPN20-203ENST00000374342 C3orf62Q6ZUJ4 267 aa17.36■□□□□ 0.37
PTPN20-203ENST00000374342 ZNF534Q76KX8 674 aa17.36■□□□□ 0.37
PTPN20-203ENST00000374342 EXOC3L1Q86VI1 746 aa17.36■□□□□ 0.37
PTPN20-203ENST00000374342 MIB1Q86YT6 1006 aa17.36■□□□□ 0.37
PTPN20-203ENST00000374342 CYP4X1Q8N118 509 aa17.36■□□□□ 0.37
PTPN20-203ENST00000374342 FBF1Q8TES7 1133 aa17.36■□□□□ 0.37
PTPN20-203ENST00000374342 TMEM169Q96HH4 297 aa17.36■□□□□ 0.37
PTPN20-203ENST00000374342 OLA1Q9NTK5 396 aaKnown RBP17.36■□□□□ 0.37
PTPN20-203ENST00000374342 EURLQ9NYK6 297 aa17.36■□□□□ 0.37
PTPN20-203ENST00000374342 CLIC5Q9NZA1 410 aa17.36■□□□□ 0.37
PTPN20-203ENST00000374342 RABGEF1Q9UJ41 708 aa17.36■□□□□ 0.37
PTPN20-203ENST00000374342 BACE2Q9Y5Z0 518 aa17.36■□□□□ 0.37
PTPN20-203ENST00000374342 E9PAM4 449 aa17.35■□□□□ 0.37
PTPN20-203ENST00000374342 DFFAO00273 331 aa17.35■□□□□ 0.37
PTPN20-203ENST00000374342 ZNF189O75820 626 aaPredicted RBP17.35■□□□□ 0.37
PTPN20-203ENST00000374342 TBX18O95935 607 aa17.35■□□□□ 0.37
PTPN20-203ENST00000374342 APOEP02649 317 aa17.35■□□□□ 0.37
PTPN20-203ENST00000374342 ACRP10323 421 aa17.35■□□□□ 0.37
PTPN20-203ENST00000374342 TSHRP16473 764 aa17.35■□□□□ 0.37
PTPN20-203ENST00000374342 PTPN3P26045 913 aa17.35■□□□□ 0.37
PTPN20-203ENST00000374342 HOXC13P31276 330 aa17.35■□□□□ 0.37
PTPN20-203ENST00000374342 HTR7P34969 479 aa17.35■□□□□ 0.37
PTPN20-203ENST00000374342 BTG3Q14201 252 aaPredicted RBP17.35■□□□□ 0.37
PTPN20-203ENST00000374342 PIK3R6Q5UE93 754 aa17.35■□□□□ 0.37
PTPN20-203ENST00000374342 LRRC31Q6UY01 552 aa17.35■□□□□ 0.37
PTPN20-203ENST00000374342 SLC39A11Q8N1S5 342 aa17.35■□□□□ 0.37
PTPN20-203ENST00000374342 ZNF689Q96CS4 500 aaPredicted RBP17.35■□□□□ 0.37
PTPN20-203ENST00000374342 SLC39A13Q96H72 371 aa17.35■□□□□ 0.37
PTPN20-203ENST00000374342 ACSS3Q9H6R3 686 aa17.35■□□□□ 0.37
PTPN20-203ENST00000374342 CATSPERBQ9H7T0 1116 aa17.35■□□□□ 0.37
PTPN20-203ENST00000374342 RC3H2Q9HBD1 1191 aaKnown RBP17.35■□□□□ 0.37
PTPN20-203ENST00000374342 COMMD8Q9NX08 183 aa17.35■□□□□ 0.37
PTPN20-203ENST00000374342 CPP00450 1065 aa17.35■□□□□ 0.37
PTPN20-203ENST00000374342 SOD2P04179 222 aa17.35■□□□□ 0.37
PTPN20-203ENST00000374342 SLC2A3P11169 496 aa17.35■□□□□ 0.37
PTPN20-203ENST00000374342 CHN1P15882 459 aa17.35■□□□□ 0.37
PTPN20-203ENST00000374342 KLHL38Q2WGJ6 581 aa17.35■□□□□ 0.37
PTPN20-203ENST00000374342 C14orf80Q86SX3 495 aa17.35■□□□□ 0.37
PTPN20-203ENST00000374342 PDCD7Q8N8D1 485 aaKnown RBP17.35■□□□□ 0.37
PTPN20-203ENST00000374342 BRD8Q9H0E9 1235 aa17.35■□□□□ 0.37
PTPN20-203ENST00000374342 XAB2Q9HCS7 855 aaKnown RBP17.35■□□□□ 0.37
PTPN20-203ENST00000374342 MARCH2Q9P0N8 246 aa17.35■□□□□ 0.37
PTPN20-203ENST00000374342 PSMC3IPQ9P2W1 217 aaPredicted RBP17.35■□□□□ 0.37
PTPN20-203ENST00000374342 HMBSP08397 361 aa17.34■□□□□ 0.37
PTPN20-203ENST00000374342 GRIA1P42261 906 aa17.34■□□□□ 0.37
PTPN20-203ENST00000374342 MAGEA3P43357 314 aa17.34■□□□□ 0.37
PTPN20-203ENST00000374342 TUBP50607 506 aa17.34■□□□□ 0.37
PTPN20-203ENST00000374342 GEMIN4P57678 1058 aaKnown RBP17.34■□□□□ 0.37
PTPN20-203ENST00000374342 COG7P83436 770 aa17.34■□□□□ 0.37
PTPN20-203ENST00000374342 TRIP4Q15650 581 aaPredicted RBP17.34■□□□□ 0.37
PTPN20-203ENST00000374342 PID1Q7Z2X4 250 aa17.34■□□□□ 0.37
PTPN20-203ENST00000374342 NECAB2Q7Z6G3 386 aa17.34■□□□□ 0.37
PTPN20-203ENST00000374342 TDRPQ86YL5 185 aa17.34■□□□□ 0.37
PTPN20-203ENST00000374342 SRRM1Q8IYB3 904 aaKnown RBP17.34■□□□□ 0.37
PTPN20-203ENST00000374342 ATPAF2Q8N5M1 289 aa17.34■□□□□ 0.37
PTPN20-203ENST00000374342 XPO6Q96QU8 1125 aaKnown RBP17.34■□□□□ 0.37
PTPN20-203ENST00000374342 HERC2P3Q9BVR0 1158 aa17.34■□□□□ 0.37
PTPN20-203ENST00000374342 CCSER2Q9H7U1 834 aa17.34■□□□□ 0.37
PTPN20-203ENST00000374342 PPCSQ9HAB8 311 aa17.34■□□□□ 0.37
PTPN20-203ENST00000374342 EIF2B3Q9NR50 452 aaKnown RBP17.34■□□□□ 0.37
PTPN20-203ENST00000374342 SLC24A2Q9UI40 661 aa17.34■□□□□ 0.37
PTPN20-203ENST00000374342 KIAA0100Q14667 2235 aaKnown RBP17.34■□□□□ 0.37
PTPN20-203ENST00000374342 KIAA0355O15063 1070 aa17.33■□□□□ 0.37
PTPN20-203ENST00000374342 MTSS1O43312 755 aa17.33■□□□□ 0.37
PTPN20-203ENST00000374342 PIAS1O75925 651 aa17.33■□□□□ 0.37
PTPN20-203ENST00000374342 CREB1P16220 341 aa17.33■□□□□ 0.37
PTPN20-203ENST00000374342 LAG3P18627 525 aa17.33■□□□□ 0.37
PTPN20-203ENST00000374342 SARNPP82979 210 aaKnown RBP17.33■□□□□ 0.37
PTPN20-203ENST00000374342 ZBTB17Q13105 803 aa17.33■□□□□ 0.37
PTPN20-203ENST00000374342 PARP6Q2NL67 630 aa17.33■□□□□ 0.37
PTPN20-203ENST00000374342 PAFAH2Q99487 392 aa17.33■□□□□ 0.37
PTPN20-203ENST00000374342 CLSTN3Q9BQT9 956 aa17.33■□□□□ 0.37
PTPN20-203ENST00000374342 TMEM51Q9NW97 253 aa17.33■□□□□ 0.37
PTPN20-203ENST00000374342 MPP6Q9NZW5 540 aa17.33■□□□□ 0.37
PTPN20-203ENST00000374342 IGSF9Q9P2J2 1179 aa17.33■□□□□ 0.37
PTPN20-203ENST00000374342 ZC3H7BQ9UGR2 993 aaKnown RBP17.33■□□□□ 0.37
PTPN20-203ENST00000374342 RSPH14Q9UHP6 348 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms