RNA–Protein interactions for RNA: ENST00000374274.7

SNX12-202, Transcript of sorting nexin 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX12, Length 2,376 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-202ENST00000374274 ISLR2Q6UXK2 745 aa13.75□□□□□ -0.21
SNX12-202ENST00000374274 NIM1KQ8IY84 436 aa13.75□□□□□ -0.21
SNX12-202ENST00000374274 ARFGAP1Q8N6T3 406 aa13.75□□□□□ -0.21
SNX12-202ENST00000374274 CNDP2Q96KP4 475 aaKnown RBP13.75□□□□□ -0.21
SNX12-202ENST00000374274 UHRF1Q96T88 793 aaPredicted RBP13.75□□□□□ -0.21
SNX12-202ENST00000374274 CGREF1Q99674 301 aa13.75□□□□□ -0.21
SNX12-202ENST00000374274 GPATCH1Q9BRR8 931 aaKnown RBP13.75□□□□□ -0.21
SNX12-202ENST00000374274 TCHPQ9BT92 498 aa13.75□□□□□ -0.21
SNX12-202ENST00000374274 UNKQ9C0B0 810 aaKnown RBP13.75□□□□□ -0.21
SNX12-202ENST00000374274 TCF7L2Q9NQB0 619 aa13.75□□□□□ -0.21
SNX12-202ENST00000374274 XPNPEP1Q9NQW7 623 aa13.75□□□□□ -0.21
SNX12-202ENST00000374274 CLEC11AQ9Y240 323 aa13.75□□□□□ -0.21
SNX12-202ENST00000374274 C7orf72A4D263 438 aa13.74□□□□□ -0.21
SNX12-202ENST00000374274 DDX39AO00148 427 aaKnown RBP13.74□□□□□ -0.21
SNX12-202ENST00000374274 AIM2O14862 343 aa13.74□□□□□ -0.21
SNX12-202ENST00000374274 ADAM23O75077 832 aa13.74□□□□□ -0.21
SNX12-202ENST00000374274 MCF2P10911 925 aa13.74□□□□□ -0.21
SNX12-202ENST00000374274 CDH3P22223 829 aa13.74□□□□□ -0.21
SNX12-202ENST00000374274 TMED10P49755 219 aaKnown RBP13.74□□□□□ -0.21
SNX12-202ENST00000374274 JAK3P52333 1124 aa13.74□□□□□ -0.21
SNX12-202ENST00000374274 SLC5A3P53794 718 aa13.74□□□□□ -0.21
SNX12-202ENST00000374274 PEX6Q13608 980 aa13.74□□□□□ -0.21
SNX12-202ENST00000374274 SMTNL2Q2TAL5 461 aa13.74□□□□□ -0.21
SNX12-202ENST00000374274 CLVS1Q8IUQ0 354 aaPredicted RBP13.74□□□□□ -0.21
SNX12-202ENST00000374274 C10orf107Q8IVU9 208 aa13.74□□□□□ -0.21
SNX12-202ENST00000374274 COLGALT2Q8IYK4 626 aa13.74□□□□□ -0.21
SNX12-202ENST00000374274 CENPSQ8N2Z9 138 aa13.74□□□□□ -0.21
SNX12-202ENST00000374274 FIBCD1Q8N539 461 aa13.74□□□□□ -0.21
SNX12-202ENST00000374274 SLC4A11Q8NBS3 891 aa13.74□□□□□ -0.21
SNX12-202ENST00000374274 SREK1Q8WXA9 508 aaKnown RBP13.74□□□□□ -0.21
SNX12-202ENST00000374274 THAP11Q96EK4 314 aa13.74□□□□□ -0.21
SNX12-202ENST00000374274 SNX27Q96L92 541 aa13.74□□□□□ -0.21
SNX12-202ENST00000374274 SIGLEC10Q96LC7 697 aa13.74□□□□□ -0.21
SNX12-202ENST00000374274 PPP1R10Q96QC0 940 aaKnown RBP13.74□□□□□ -0.21
SNX12-202ENST00000374274 OLFM1Q99784 485 aa13.74□□□□□ -0.21
SNX12-202ENST00000374274 CAAP1Q9H8G2 361 aa13.74□□□□□ -0.21
SNX12-202ENST00000374274 AGO4Q9HCK5 861 aaKnown RBP13.74□□□□□ -0.21
SNX12-202ENST00000374274 TMEM9Q9P0T7 183 aa13.74□□□□□ -0.21
SNX12-202ENST00000374274 BCLAF3A2AJT9 711 aaKnown RBP13.74□□□□□ -0.21
SNX12-202ENST00000374274 PSMD12O00232 456 aaPredicted RBP13.74□□□□□ -0.21
SNX12-202ENST00000374274 XPO1O14980 1071 aaKnown RBP13.74□□□□□ -0.21
SNX12-202ENST00000374274 ZMPSTE24O75844 475 aa13.74□□□□□ -0.21
SNX12-202ENST00000374274 KRT3P12035 628 aa13.74□□□□□ -0.21
SNX12-202ENST00000374274 DCKP27707 260 aa13.74□□□□□ -0.21
SNX12-202ENST00000374274 EPHA3P29320 983 aa13.74□□□□□ -0.21
SNX12-202ENST00000374274 SFNP31947 248 aa13.74□□□□□ -0.21
SNX12-202ENST00000374274 RPS3AP61247 264 aaKnown RBP13.74□□□□□ -0.21
SNX12-202ENST00000374274 UBXN2AP68543 259 aa13.74□□□□□ -0.21
SNX12-202ENST00000374274 CEACAM7Q14002 265 aa13.74□□□□□ -0.21
SNX12-202ENST00000374274 PDE1CQ14123 709 aaPredicted RBP13.74□□□□□ -0.21
SNX12-202ENST00000374274 XKR9Q5GH70 373 aa13.74□□□□□ -0.21
SNX12-202ENST00000374274 ITPRIPL1Q6GPH6 555 aa13.74□□□□□ -0.21
SNX12-202ENST00000374274 MAMDC4Q6UXC1 1216 aa13.74□□□□□ -0.21
SNX12-202ENST00000374274 SNX32Q86XE0 403 aa13.74□□□□□ -0.21
SNX12-202ENST00000374274 AGBL3Q8NEM8 1001 aa13.74□□□□□ -0.21
SNX12-202ENST00000374274 TBC1D15Q8TC07 691 aa13.74□□□□□ -0.21
SNX12-202ENST00000374274 ASB9Q96DX5 294 aa13.74□□□□□ -0.21
SNX12-202ENST00000374274 WRNIP1Q96S55 665 aa13.74□□□□□ -0.21
SNX12-202ENST00000374274 CGRRF1Q99675 332 aa13.74□□□□□ -0.21
SNX12-202ENST00000374274 TMEM79Q9BSE2 394 aa13.74□□□□□ -0.21
SNX12-202ENST00000374274 PAIP1Q9H074 479 aaKnown RBP13.74□□□□□ -0.21
SNX12-202ENST00000374274 SUCOQ9UBS9 1254 aaKnown RBP13.74□□□□□ -0.21
SNX12-202ENST00000374274 SUN2Q9UH99 717 aa13.74□□□□□ -0.21
SNX12-202ENST00000374274 GPC6Q9Y625 555 aaPredicted RBP13.74□□□□□ -0.21
SNX12-202ENST00000374274 SLC30A1Q9Y6M5 507 aa13.74□□□□□ -0.21
SNX12-202ENST00000374274 CNTNAP1P78357 1384 aa13.73□□□□□ -0.21
SNX12-202ENST00000374274 TRIM38O00635 465 aa13.73□□□□□ -0.21
SNX12-202ENST00000374274 RNASEH2AO75792 299 aaKnown RBP13.73□□□□□ -0.21
SNX12-202ENST00000374274 SULT1C4O75897 302 aa13.73□□□□□ -0.21
SNX12-202ENST00000374274 ALDOAP04075 364 aaKnown RBP13.73□□□□□ -0.21
SNX12-202ENST00000374274 RFC1P35251 1148 aaPredicted RBP13.73□□□□□ -0.21
SNX12-202ENST00000374274 MS4A2Q01362 244 aa13.73□□□□□ -0.21
SNX12-202ENST00000374274 FKBP1CQ5VVH2 108 aa13.73□□□□□ -0.21
SNX12-202ENST00000374274 PACRGLQ8N7B6 248 aa13.73□□□□□ -0.21
SNX12-202ENST00000374274 CNTD1Q8N815 330 aa13.73□□□□□ -0.21
SNX12-202ENST00000374274 TRUB1Q8WWH5 349 aaKnown RBP13.73□□□□□ -0.21
SNX12-202ENST00000374274 CDKL2Q92772 493 aa13.73□□□□□ -0.21
SNX12-202ENST00000374274 CCDC97Q96F63 343 aaPredicted RBP13.73□□□□□ -0.21
SNX12-202ENST00000374274 ZNF512Q96ME7 567 aaPredicted RBP13.73□□□□□ -0.21
SNX12-202ENST00000374274 KLHL32Q96NJ5 620 aa13.73□□□□□ -0.21
SNX12-202ENST00000374274 SLC4A5Q9BY07 1137 aa13.73□□□□□ -0.21
SNX12-202ENST00000374274 IMPG2Q9BZV3 1241 aa13.73□□□□□ -0.21
SNX12-202ENST00000374274 ZNF385DQ9H6B1 395 aa13.73□□□□□ -0.21
SNX12-202ENST00000374274 PRDM16Q9HAZ2 1276 aa13.73□□□□□ -0.21
SNX12-202ENST00000374274 GIN1Q9NXP7 522 aa13.73□□□□□ -0.21
SNX12-202ENST00000374274 PIM2Q9P1W9 311 aa13.73□□□□□ -0.21
SNX12-202ENST00000374274 NUB1Q9Y5A7 615 aa13.73□□□□□ -0.21
SNX12-202ENST00000374274 HEMK1Q9Y5R4 338 aaPredicted RBP13.73□□□□□ -0.21
SNX12-202ENST00000374274 A0A1B0GTW7 788 aa13.73□□□□□ -0.21
SNX12-202ENST00000374274 TOMM70O94826 608 aa13.73□□□□□ -0.21
SNX12-202ENST00000374274 PRKCGP05129 697 aa13.73□□□□□ -0.21
SNX12-202ENST00000374274 TGM2P21980 687 aa13.73□□□□□ -0.21
SNX12-202ENST00000374274 ARRB2P32121 409 aa13.73□□□□□ -0.21
SNX12-202ENST00000374274 SSTR3P32745 418 aaPredicted RBP13.73□□□□□ -0.21
SNX12-202ENST00000374274 AP3M2P53677 418 aa13.73□□□□□ -0.21
SNX12-202ENST00000374274 NIPAL4Q0D2K0 466 aa13.73□□□□□ -0.21
SNX12-202ENST00000374274 ANKDD1AQ495B1 522 aa13.73□□□□□ -0.21
SNX12-202ENST00000374274 KCNT1Q5JUK3 1230 aa13.73□□□□□ -0.21
SNX12-202ENST00000374274 VWA5B1Q5TIE3 1220 aa13.73□□□□□ -0.21
SNX12-202ENST00000374274 TRMT10BQ6PF06 316 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms