RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 WNK4Q96J92 1243 aa13.23□□□□□ -0.29
PRPF4-201ENST00000374198 SLC29A1Q99808 456 aa13.23□□□□□ -0.29
PRPF4-201ENST00000374198 OSBPL10Q9BXB5 764 aa13.23□□□□□ -0.29
PRPF4-201ENST00000374198 ZC3H12CQ9C0D7 883 aaKnown RBP13.23□□□□□ -0.29
PRPF4-201ENST00000374198 TBC1D22BQ9NU19 505 aa13.23□□□□□ -0.29
PRPF4-201ENST00000374198 ZC3H7BQ9UGR2 993 aaKnown RBP13.23□□□□□ -0.29
PRPF4-201ENST00000374198 DAPK2Q9UIK4 370 aa13.23□□□□□ -0.29
PRPF4-201ENST00000374198 EMCNQ9ULC0 261 aa13.23□□□□□ -0.29
PRPF4-201ENST00000374198 AGTPBP1Q9UPW5 1226 aa13.23□□□□□ -0.29
PRPF4-201ENST00000374198 RGSL1A5PLK6 1076 aa13.23□□□□□ -0.29
PRPF4-201ENST00000374198 ARHGEF35A5YM69 484 aa13.23□□□□□ -0.29
PRPF4-201ENST00000374198 C3orf70A6NLC5 250 aaPredicted RBP13.23□□□□□ -0.29
PRPF4-201ENST00000374198 GPR25O00155 361 aa13.23□□□□□ -0.29
PRPF4-201ENST00000374198 CST8O60676 142 aa13.23□□□□□ -0.29
PRPF4-201ENST00000374198 FOSP01100 380 aaPredicted RBP13.23□□□□□ -0.29
PRPF4-201ENST00000374198 GRK2P25098 689 aa13.23□□□□□ -0.29
PRPF4-201ENST00000374198 SSTR3P32745 418 aaPredicted RBP13.23□□□□□ -0.29
PRPF4-201ENST00000374198 FRA10AC1Q70Z53 315 aa13.23□□□□□ -0.29
PRPF4-201ENST00000374198 ZNF786Q8N393 782 aa13.23□□□□□ -0.29
PRPF4-201ENST00000374198 ATP6V1E2Q96A05 226 aa13.23□□□□□ -0.29
PRPF4-201ENST00000374198 OTUD5Q96G74 571 aa13.23□□□□□ -0.29
PRPF4-201ENST00000374198 ZNF641Q96N77 438 aaPredicted RBP13.23□□□□□ -0.29
PRPF4-201ENST00000374198 MROQ9BYG7 248 aa13.23□□□□□ -0.29
PRPF4-201ENST00000374198 CTDP1Q9Y5B0 961 aaPredicted RBP13.23□□□□□ -0.29
PRPF4-201ENST00000374198 CPQQ9Y646 472 aa13.23□□□□□ -0.29
PRPF4-201ENST00000374198 CDK5RAP2Q96SN8 1893 aa13.23□□□□□ -0.29
PRPF4-201ENST00000374198 CSPG5O95196 566 aa13.22□□□□□ -0.29
PRPF4-201ENST00000374198 MAPTP10636 758 aaKnown RBP13.22□□□□□ -0.29
PRPF4-201ENST00000374198 PIK3R1P27986 724 aa13.22□□□□□ -0.29
PRPF4-201ENST00000374198 NRLP54845 237 aa13.22□□□□□ -0.29
PRPF4-201ENST00000374198 C1QTNF8P60827 252 aa13.22□□□□□ -0.29
PRPF4-201ENST00000374198 TRAF2Q12933 501 aa13.22□□□□□ -0.29
PRPF4-201ENST00000374198 KCNJ11Q14654 390 aa13.22□□□□□ -0.29
PRPF4-201ENST00000374198 RAB39AQ14964 217 aa13.22□□□□□ -0.29
PRPF4-201ENST00000374198 TTC33Q6PID6 262 aaPredicted RBP13.22□□□□□ -0.29
PRPF4-201ENST00000374198 EPGNQ6UW88 154 aa13.22□□□□□ -0.29
PRPF4-201ENST00000374198 SV2AQ7L0J3 742 aa13.22□□□□□ -0.29
PRPF4-201ENST00000374198 ZBTB46Q86UZ6 589 aa13.22□□□□□ -0.29
PRPF4-201ENST00000374198 ZNF354CQ86Y25 554 aa13.22□□□□□ -0.29
PRPF4-201ENST00000374198 PGAM4Q8N0Y7 254 aa13.22□□□□□ -0.29
PRPF4-201ENST00000374198 SIX6OS1Q8N1H7 587 aa13.22□□□□□ -0.29
PRPF4-201ENST00000374198 LRTOMTQ8WZ04 291 aa13.22□□□□□ -0.29
PRPF4-201ENST00000374198 C1orf50Q9BV19 199 aa13.22□□□□□ -0.29
PRPF4-201ENST00000374198 NAA50Q9GZZ1 169 aaKnown RBP13.22□□□□□ -0.29
PRPF4-201ENST00000374198 KLHL25Q9H0H3 589 aa13.22□□□□□ -0.29
PRPF4-201ENST00000374198 COG4Q9H9E3 785 aa13.22□□□□□ -0.29
PRPF4-201ENST00000374198 PLAC1Q9HBJ0 212 aa13.22□□□□□ -0.29
PRPF4-201ENST00000374198 GPRC5CQ9NQ84 441 aa13.22□□□□□ -0.29
PRPF4-201ENST00000374198 DKK3Q9UBP4 350 aa13.22□□□□□ -0.29
PRPF4-201ENST00000374198 COL4A5P29400 1685 aa13.22□□□□□ -0.29
PRPF4-201ENST00000374198 IGLV3-22A0A075B6J6 115 aa13.22□□□□□ -0.29
PRPF4-201ENST00000374198 C1orf232A0A0U1RR37 186 aa13.22□□□□□ -0.29
PRPF4-201ENST00000374198 DYNC1LI2O43237 492 aaPredicted RBP13.22□□□□□ -0.29
PRPF4-201ENST00000374198 PSMD10O75832 226 aa13.22□□□□□ -0.29
PRPF4-201ENST00000374198 CYP3A4P08684 503 aa13.22□□□□□ -0.29
PRPF4-201ENST00000374198 ZNF182P17025 639 aaPredicted RBP13.22□□□□□ -0.29
PRPF4-201ENST00000374198 FGFR3P22607 806 aa13.22□□□□□ -0.29
PRPF4-201ENST00000374198 HARS2P49590 506 aaKnown RBP13.22□□□□□ -0.29
PRPF4-201ENST00000374198 ABCE1P61221 599 aaKnown RBP13.22□□□□□ -0.29
PRPF4-201ENST00000374198 YWHAZP63104 245 aaKnown RBP13.22□□□□□ -0.29
PRPF4-201ENST00000374198 PRAMEP78395 509 aa13.22□□□□□ -0.29
PRPF4-201ENST00000374198 SLC10A2Q12908 348 aaPredicted RBP13.22□□□□□ -0.29
PRPF4-201ENST00000374198 PCLAFQ15004 111 aa13.22□□□□□ -0.29
PRPF4-201ENST00000374198 NHSL2Q5HYW2 709 aa13.22□□□□□ -0.29
PRPF4-201ENST00000374198 PPM1LQ5SGD2 360 aa13.22□□□□□ -0.29
PRPF4-201ENST00000374198 N4BP2L1Q5TBK1 243 aaPredicted RBP13.22□□□□□ -0.29
PRPF4-201ENST00000374198 SCARA3Q6AZY7 606 aa13.22□□□□□ -0.29
PRPF4-201ENST00000374198 GALNT18Q6P9A2 607 aa13.22□□□□□ -0.29
PRPF4-201ENST00000374198 TTC30AQ86WT1 665 aa13.22□□□□□ -0.29
PRPF4-201ENST00000374198 IQCF2Q8IXL9 164 aa13.22□□□□□ -0.29
PRPF4-201ENST00000374198 ABRAQ8N0Z2 381 aa13.22□□□□□ -0.29
PRPF4-201ENST00000374198 SAMD3Q8N6K7 520 aa13.22□□□□□ -0.29
PRPF4-201ENST00000374198 TMC2Q8TDI7 906 aa13.22□□□□□ -0.29
PRPF4-201ENST00000374198 DBNDD1Q9H9R9 158 aa13.22□□□□□ -0.29
PRPF4-201ENST00000374198 POPDC2Q9HBU9 364 aa13.22□□□□□ -0.29
PRPF4-201ENST00000374198 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.22□□□□□ -0.293e-6■■■■□ 20.1
PRPF4-201ENST00000374198 SEPT3Q9UH03 358 aa13.22□□□□□ -0.29
PRPF4-201ENST00000374198 IPO11Q9UI26 975 aaKnown RBP13.22□□□□□ -0.29
PRPF4-201ENST00000374198 POU2F3Q9UKI9 436 aa13.22□□□□□ -0.29
PRPF4-201ENST00000374198 ANKRD34BA5PLL1 514 aa13.21□□□□□ -0.29
PRPF4-201ENST00000374198 TRIM64A6NGJ6 449 aa13.21□□□□□ -0.29
PRPF4-201ENST00000374198 ATP2B4P23634 1241 aa13.21□□□□□ -0.29
PRPF4-201ENST00000374198 DPP6P42658 865 aa13.21□□□□□ -0.29
PRPF4-201ENST00000374198 NUMBP49757 651 aa13.21□□□□□ -0.29
PRPF4-201ENST00000374198 NFATC3Q12968 1075 aa13.21□□□□□ -0.29
PRPF4-201ENST00000374198 DOK7Q18PE1 504 aa13.21□□□□□ -0.29
PRPF4-201ENST00000374198 SLC9B1Q4ZJI4 515 aa13.21□□□□□ -0.29
PRPF4-201ENST00000374198 PPP1R2P3Q6NXS1 205 aa13.21□□□□□ -0.29
PRPF4-201ENST00000374198 MAMDC4Q6UXC1 1216 aa13.21□□□□□ -0.29
PRPF4-201ENST00000374198 TIFABQ6ZNK6 161 aa13.21□□□□□ -0.29
PRPF4-201ENST00000374198 BBS12Q6ZW61 710 aa13.21□□□□□ -0.29
PRPF4-201ENST00000374198 CYP2U1Q7Z449 544 aa13.21□□□□□ -0.29
PRPF4-201ENST00000374198 MCF2L2Q86YR7 1114 aa13.21□□□□□ -0.29
PRPF4-201ENST00000374198 TNIP2Q8NFZ5 429 aa13.21□□□□□ -0.29
PRPF4-201ENST00000374198 ZSCAN18Q8TBC5 510 aaPredicted RBP13.21□□□□□ -0.29
PRPF4-201ENST00000374198 TFAP2CQ92754 450 aa13.21□□□□□ -0.29
PRPF4-201ENST00000374198 ALPK1Q96QP1 1244 aa13.21□□□□□ -0.29
PRPF4-201ENST00000374198 ZFYVE28Q9HCC9 887 aa13.21□□□□□ -0.29
PRPF4-201ENST00000374198 C1orf112Q9NSG2 853 aa13.21□□□□□ -0.29
PRPF4-201ENST00000374198 DUS2Q9NX74 493 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms