RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 BRD8Q9H0E9 1235 aa20.13■□□□□ 0.81
HDAC1-201ENST00000373548 SAGE1Q9NXZ1 904 aa20.13■□□□□ 0.81
HDAC1-201ENST00000373548 KLHL8Q9P2G9 620 aaPredicted RBP20.13■□□□□ 0.81
HDAC1-201ENST00000373548 CXorf49A8MYA2 514 aaPredicted RBP20.12■□□□□ 0.81
HDAC1-201ENST00000373548 TRIM66O15016 1216 aa20.12■□□□□ 0.81
HDAC1-201ENST00000373548 PAGE1O75459 146 aa20.12■□□□□ 0.81
HDAC1-201ENST00000373548 ALDH2P05091 517 aa20.12■□□□□ 0.81
HDAC1-201ENST00000373548 INHBAP08476 426 aa20.12■□□□□ 0.81
HDAC1-201ENST00000373548 MX2P20592 715 aa20.12■□□□□ 0.81
HDAC1-201ENST00000373548 FGFR3P22607 806 aa20.12■□□□□ 0.81
HDAC1-201ENST00000373548 CA4P22748 312 aa20.12■□□□□ 0.81
HDAC1-201ENST00000373548 GARSP41250 739 aaKnown RBP20.12■□□□□ 0.81
HDAC1-201ENST00000373548 MAGEA11P43364 429 aa20.12■□□□□ 0.81
HDAC1-201ENST00000373548 IFT88Q13099 833 aa20.12■□□□□ 0.81
HDAC1-201ENST00000373548 MTFR1Q15390 333 aa20.12■□□□□ 0.81
HDAC1-201ENST00000373548 ZNF280DQ6N043 979 aa20.12■□□□□ 0.81
HDAC1-201ENST00000373548 LRRC8BQ6P9F7 803 aa20.12■□□□□ 0.81
HDAC1-201ENST00000373548 ATAD1Q8NBU5 361 aa20.12■□□□□ 0.81
HDAC1-201ENST00000373548 APBB2Q92870 758 aa20.12■□□□□ 0.81
HDAC1-201ENST00000373548 SMYD2Q9NRG4 433 aa20.12■□□□□ 0.81
HDAC1-201ENST00000373548 IKBKGQ9Y6K9 419 aa20.12■□□□□ 0.81
HDAC1-201ENST00000373548 FNDC1Q4ZHG4 1894 aaPredicted RBP20.12■□□□□ 0.81
HDAC1-201ENST00000373548 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.12■□□□□ 0.81
HDAC1-201ENST00000373548 SRGAP2BP0DMP2 458 aa20.12■□□□□ 0.81
HDAC1-201ENST00000373548 CCR1P32246 355 aa20.12■□□□□ 0.81
HDAC1-201ENST00000373548 FOXN2P32314 431 aa20.12■□□□□ 0.81
HDAC1-201ENST00000373548 CORO7P57737 925 aa20.12■□□□□ 0.81
HDAC1-201ENST00000373548 USP46P62068 366 aa20.12■□□□□ 0.81
HDAC1-201ENST00000373548 FAAP100Q0VG06 881 aa20.12■□□□□ 0.81
HDAC1-201ENST00000373548 ARTNQ5T4W7 220 aa20.12■□□□□ 0.81
HDAC1-201ENST00000373548 MON1AQ86VX9 555 aa20.12■□□□□ 0.81
HDAC1-201ENST00000373548 PPM1NQ8N819 430 aa20.12■□□□□ 0.81
HDAC1-201ENST00000373548 GSDMBQ8TAX9 411 aa20.12■□□□□ 0.81
HDAC1-201ENST00000373548 SCLYQ96I15 445 aa20.12■□□□□ 0.81
HDAC1-201ENST00000373548 CABS1Q96KC9 395 aa20.12■□□□□ 0.81
HDAC1-201ENST00000373548 TGS1Q96RS0 853 aaKnown RBP20.12■□□□□ 0.81
HDAC1-201ENST00000373548 GORASP1Q9BQQ3 440 aa20.12■□□□□ 0.81
HDAC1-201ENST00000373548 NSRP1Q9H0G5 558 aaKnown RBP20.12■□□□□ 0.81
HDAC1-201ENST00000373548 FGFR1OP2Q9NVK5 253 aa20.12■□□□□ 0.81
HDAC1-201ENST00000373548 IQANK1A0A1B0GTG1 560 aa20.11■□□□□ 0.81
HDAC1-201ENST00000373548 OR6C75A6NL08 312 aa20.11■□□□□ 0.81
HDAC1-201ENST00000373548 IL9RQ01113 521 aa20.11■□□□□ 0.81
HDAC1-201ENST00000373548 PPP2R5DQ14738 602 aa20.11■□□□□ 0.81
HDAC1-201ENST00000373548 SLC1A5Q15758 541 aa20.11■□□□□ 0.81
HDAC1-201ENST00000373548 MANEALQ5VSG8 457 aa20.11■□□□□ 0.81
HDAC1-201ENST00000373548 RWDD4Q6NW29 188 aaKnown RBP20.11■□□□□ 0.81
HDAC1-201ENST00000373548 TRMT10BQ6PF06 316 aaKnown RBP20.11■□□□□ 0.81
HDAC1-201ENST00000373548 SLC26A11Q86WA9 606 aa20.11■□□□□ 0.81
HDAC1-201ENST00000373548 LRRC6Q86X45 466 aa20.11■□□□□ 0.81
HDAC1-201ENST00000373548 NPAS4Q8IUM7 802 aa20.11■□□□□ 0.81
HDAC1-201ENST00000373548 CTAGE3PQ8IX95 158 aa20.11■□□□□ 0.81
HDAC1-201ENST00000373548 CELF6Q96J87 481 aaKnown RBP20.11■□□□□ 0.81
HDAC1-201ENST00000373548 ELAC2Q9BQ52 826 aaKnown RBP20.11■□□□□ 0.81
HDAC1-201ENST00000373548 PCDHA11Q9Y5I1 949 aa20.11■□□□□ 0.81
HDAC1-201ENST00000373548 FAM155BO75949 473 aa20.11■□□□□ 0.81
HDAC1-201ENST00000373548 ZBTB17Q13105 803 aa20.11■□□□□ 0.81
HDAC1-201ENST00000373548 NUGGCQ68CJ6 796 aa20.11■□□□□ 0.81
HDAC1-201ENST00000373548 FUT10Q6P4F1 479 aa20.11■□□□□ 0.81
HDAC1-201ENST00000373548 CCDC197Q8NCU1 140 aa20.11■□□□□ 0.81
HDAC1-201ENST00000373548 DPF3Q92784 378 aa20.11■□□□□ 0.81
HDAC1-201ENST00000373548 STAMBPL1Q96FJ0 436 aa20.11■□□□□ 0.81
HDAC1-201ENST00000373548 KLF6Q99612 283 aaPredicted RBP20.11■□□□□ 0.81
HDAC1-201ENST00000373548 PAIP2Q9BPZ3 127 aaKnown RBP20.11■□□□□ 0.81
HDAC1-201ENST00000373548 FBXO44Q9H4M3 255 aa20.11■□□□□ 0.81
HDAC1-201ENST00000373548 PIH1D1Q9NWS0 290 aaKnown RBP20.11■□□□□ 0.81
HDAC1-201ENST00000373548 GRID1Q9ULK0 1009 aa20.11■□□□□ 0.81
HDAC1-201ENST00000373548 GREB1Q4ZG55 1949 aa20.1■□□□□ 0.81
HDAC1-201ENST00000373548 WDR27A2RRH5 827 aa20.1■□□□□ 0.81
HDAC1-201ENST00000373548 NT5C1B-RDH14C9J2C7 533 aa20.1■□□□□ 0.81
HDAC1-201ENST00000373548 GOLGA8RI6L899 631 aa20.1■□□□□ 0.81
HDAC1-201ENST00000373548 MYO1CO00159 1063 aa20.1■□□□□ 0.81
HDAC1-201ENST00000373548 MTSS1O43312 755 aa20.1■□□□□ 0.81
HDAC1-201ENST00000373548 TAC1P20366 129 aa20.1■□□□□ 0.81
HDAC1-201ENST00000373548 HOXC13P31276 330 aa20.1■□□□□ 0.81
HDAC1-201ENST00000373548 PBX3P40426 434 aa20.1■□□□□ 0.81
HDAC1-201ENST00000373548 ARPP19P56211 112 aa20.1■□□□□ 0.81
HDAC1-201ENST00000373548 CRADDP78560 199 aa20.1■□□□□ 0.81
HDAC1-201ENST00000373548 SF3A3Q12874 501 aaKnown RBP eCLIP20.1■□□□□ 0.812e-7■■■■□ 24.8
HDAC1-201ENST00000373548 SPARCL1Q14515 664 aa20.1■□□□□ 0.81
HDAC1-201ENST00000373548 STEAP4Q687X5 459 aa20.1■□□□□ 0.81
HDAC1-201ENST00000373548 MSANTD2Q6P1R3 559 aa20.1■□□□□ 0.81
HDAC1-201ENST00000373548 YTHDF3Q7Z739 585 aaKnown RBP20.1■□□□□ 0.81
HDAC1-201ENST00000373548 BANPQ8N9N5 519 aa20.1■□□□□ 0.81
HDAC1-201ENST00000373548 GPR152Q8TDT2 470 aa20.1■□□□□ 0.81
HDAC1-201ENST00000373548 FCRL2Q96LA5 508 aaPredicted RBP20.1■□□□□ 0.81
HDAC1-201ENST00000373548 IL37Q9NZH6 218 aa20.1■□□□□ 0.81
HDAC1-201ENST00000373548 GMIPQ9P107 970 aa20.1■□□□□ 0.81
HDAC1-201ENST00000373548 SAMD15Q9P1V8 674 aa20.1■□□□□ 0.81
HDAC1-201ENST00000373548 SDR42E2A6NKP2 422 aa20.09■□□□□ 0.81
HDAC1-201ENST00000373548 FAM159BA6NKW6 160 aa20.09■□□□□ 0.81
HDAC1-201ENST00000373548 KCNU1A8MYU2 1149 aa20.09■□□□□ 0.81
HDAC1-201ENST00000373548 ZBTB24O43167 697 aaPredicted RBP20.09■□□□□ 0.81
HDAC1-201ENST00000373548 SOAT2O75908 522 aa20.09■□□□□ 0.81
HDAC1-201ENST00000373548 MT-ND3P03897 115 aa20.09■□□□□ 0.81
HDAC1-201ENST00000373548 MGAT1P26572 445 aa20.09■□□□□ 0.81
HDAC1-201ENST00000373548 GBP2P32456 591 aaPredicted RBP20.09■□□□□ 0.81
HDAC1-201ENST00000373548 CD68P34810 354 aaPredicted RBP20.09■□□□□ 0.81
HDAC1-201ENST00000373548 SESN2P58004 480 aaPredicted RBP20.09■□□□□ 0.81
HDAC1-201ENST00000373548 RSPO2Q6UXX9 243 aaPredicted RBP20.09■□□□□ 0.81
HDAC1-201ENST00000373548 TMEM173Q86WV6 379 aaPredicted RBP20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms