RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 CRTAC1Q9NQ79 661 aa13.55□□□□□ -0.24
NCDN-203ENST00000373253 CHRAC1Q9NRG0 131 aa13.55□□□□□ -0.24
NCDN-203ENST00000373253 RBM22Q9NW64 420 aaKnown RBP eCLIP13.55□□□□□ -0.24
NCDN-203ENST00000373253 TPP1O14773 563 aa13.54□□□□□ -0.24
NCDN-203ENST00000373253 CHUKO15111 745 aa13.54□□□□□ -0.24
NCDN-203ENST00000373253 ADRA1BP35368 520 aa13.54□□□□□ -0.24
NCDN-203ENST00000373253 TUBP50607 506 aa13.54□□□□□ -0.24
NCDN-203ENST00000373253 BST1Q10588 318 aa13.54□□□□□ -0.24
NCDN-203ENST00000373253 MTFR1Q15390 333 aa13.54□□□□□ -0.24
NCDN-203ENST00000373253 SMG8Q8ND04 991 aaKnown RBP13.54□□□□□ -0.24
NCDN-203ENST00000373253 GSDMBQ8TAX9 411 aa13.54□□□□□ -0.24
NCDN-203ENST00000373253 AGAP2Q99490 1192 aa13.54□□□□□ -0.24
NCDN-203ENST00000373253 SP110Q9HB58 689 aa13.54□□□□□ -0.24
NCDN-203ENST00000373253 TRIP12Q14669 1992 aaPredicted RBP13.54□□□□□ -0.24
NCDN-203ENST00000373253 PTGESO14684 152 aa13.54□□□□□ -0.24
NCDN-203ENST00000373253 ELF1P32519 619 aa13.54□□□□□ -0.24
NCDN-203ENST00000373253 GPR15P49685 360 aa13.54□□□□□ -0.24
NCDN-203ENST00000373253 SLC25A52Q3SY17 297 aa13.54□□□□□ -0.24
NCDN-203ENST00000373253 HABP4Q5JVS0 413 aaKnown RBP13.54□□□□□ -0.24
NCDN-203ENST00000373253 CDHR3Q6ZTQ4 885 aa13.54□□□□□ -0.24
NCDN-203ENST00000373253 SLC26A9Q7LBE3 791 aa13.54□□□□□ -0.24
NCDN-203ENST00000373253 LDB1Q86U70 411 aaPredicted RBP13.54□□□□□ -0.24
NCDN-203ENST00000373253 OMDQ99983 421 aa13.54□□□□□ -0.24
NCDN-203ENST00000373253 FICDQ9BVA6 458 aa13.54□□□□□ -0.24
NCDN-203ENST00000373253 GTSE1Q9NYZ3 720 aa13.54□□□□□ -0.24
NCDN-203ENST00000373253 FAM8A1Q9UBU6 413 aa13.54□□□□□ -0.24
NCDN-203ENST00000373253 DNAJC16Q9Y2G8 782 aa13.54□□□□□ -0.24
NCDN-203ENST00000373253 UBA6A0AVT1 1052 aaPredicted RBP13.54□□□□□ -0.24
NCDN-203ENST00000373253 GCKP35557 465 aa13.54□□□□□ -0.24
NCDN-203ENST00000373253 PURAQ00577 322 aaKnown RBP13.54□□□□□ -0.24
NCDN-203ENST00000373253 MUM1Q2TAK8 710 aa13.54□□□□□ -0.24
NCDN-203ENST00000373253 CTXN3Q4LDR2 81 aa13.54□□□□□ -0.24
NCDN-203ENST00000373253 NOMO2Q5JPE7 1267 aa13.54□□□□□ -0.24
NCDN-203ENST00000373253 ATG16L1Q676U5 607 aa13.54□□□□□ -0.24
NCDN-203ENST00000373253 MAMDC4Q6UXC1 1216 aa13.54□□□□□ -0.24
NCDN-203ENST00000373253 TMEM110Q86TL2 294 aa13.54□□□□□ -0.24
NCDN-203ENST00000373253 WDR75Q8IWA0 830 aaKnown RBP13.54□□□□□ -0.24
NCDN-203ENST00000373253 RIBC1Q8N443 379 aaPredicted RBP13.54□□□□□ -0.24
NCDN-203ENST00000373253 SLC4A5Q9BY07 1137 aa13.54□□□□□ -0.24
NCDN-203ENST00000373253 MKI67P46013 3256 aaKnown RBP13.54□□□□□ -0.24
NCDN-203ENST00000373253 A0A0A0MRY4 1105 aa13.53□□□□□ -0.24
NCDN-203ENST00000373253 LRIG2O94898 1065 aa13.53□□□□□ -0.24
NCDN-203ENST00000373253 GSTA1P08263 222 aa13.53□□□□□ -0.24
NCDN-203ENST00000373253 GSTA2P09210 222 aa13.53□□□□□ -0.24
NCDN-203ENST00000373253 RPL17P18621 184 aaKnown RBP13.53□□□□□ -0.24
NCDN-203ENST00000373253 TSPAN8P19075 237 aa13.53□□□□□ -0.24
NCDN-203ENST00000373253 LHX1P48742 406 aa13.53□□□□□ -0.24
NCDN-203ENST00000373253 SLC12A1Q13621 1099 aa13.53□□□□□ -0.24
NCDN-203ENST00000373253 PTAR1Q7Z6K3 402 aaPredicted RBP13.53□□□□□ -0.24
NCDN-203ENST00000373253 ZNF567Q8N184 647 aa13.53□□□□□ -0.24
NCDN-203ENST00000373253 CFAP52Q8N1V2 620 aa13.53□□□□□ -0.24
NCDN-203ENST00000373253 RNF148Q8N7C7 305 aa13.53□□□□□ -0.24
NCDN-203ENST00000373253 SLCO2A1Q92959 643 aa13.53□□□□□ -0.24
NCDN-203ENST00000373253 HSFY1Q96LI6 401 aa13.53□□□□□ -0.24
NCDN-203ENST00000373253 SPATA13Q96N96 652 aa13.53□□□□□ -0.24
NCDN-203ENST00000373253 PSAT1Q9Y617 370 aa13.53□□□□□ -0.24
NCDN-203ENST00000373253 E9PBE3 544 aa13.53□□□□□ -0.24
NCDN-203ENST00000373253 KLHL41O60662 606 aa13.53□□□□□ -0.24
NCDN-203ENST00000373253 ENTPD5O75356 428 aa13.53□□□□□ -0.24
NCDN-203ENST00000373253 TCN1P20061 433 aaPredicted RBP13.53□□□□□ -0.24
NCDN-203ENST00000373253 CHSY1Q86X52 802 aa13.53□□□□□ -0.24
NCDN-203ENST00000373253 GBP7Q8N8V2 638 aaPredicted RBP13.53□□□□□ -0.24
NCDN-203ENST00000373253 TRIB2Q92519 343 aa13.53□□□□□ -0.24
NCDN-203ENST00000373253 ERLEC1Q96DZ1 483 aa13.53□□□□□ -0.24
NCDN-203ENST00000373253 SMARCD1Q96GM5 515 aa13.53□□□□□ -0.24
NCDN-203ENST00000373253 RAB3IPQ96QF0 476 aaPredicted RBP13.53□□□□□ -0.24
NCDN-203ENST00000373253 ZNF670Q9BS34 389 aa13.53□□□□□ -0.24
NCDN-203ENST00000373253 COLEC11Q9BWP8 271 aa13.53□□□□□ -0.24
NCDN-203ENST00000373253 XAB2Q9HCS7 855 aaKnown RBP13.53□□□□□ -0.24
NCDN-203ENST00000373253 ATP8B3O60423 1300 aa13.53□□□□□ -0.24
NCDN-203ENST00000373253 XPO1O14980 1071 aaKnown RBP13.53□□□□□ -0.24
NCDN-203ENST00000373253 VAV1P15498 845 aa13.53□□□□□ -0.24
NCDN-203ENST00000373253 GATMP50440 423 aa13.53□□□□□ -0.24
NCDN-203ENST00000373253 ELF3P78545 371 aaPredicted RBP13.53□□□□□ -0.24
NCDN-203ENST00000373253 INCA1Q0VD86 236 aa13.53□□□□□ -0.24
NCDN-203ENST00000373253 PEX6Q13608 980 aa13.53□□□□□ -0.24
NCDN-203ENST00000373253 ACAP1Q15027 740 aa13.53□□□□□ -0.24
NCDN-203ENST00000373253 TCEAL1Q15170 157 aa13.53□□□□□ -0.24
NCDN-203ENST00000373253 FAM187BQ17R55 369 aa13.53□□□□□ -0.24
NCDN-203ENST00000373253 VWA5B1Q5TIE3 1220 aa13.53□□□□□ -0.24
NCDN-203ENST00000373253 NT5DC4Q86YG4 428 aa13.53□□□□□ -0.24
NCDN-203ENST00000373253 EFHBQ8N7U6 833 aa13.53□□□□□ -0.24
NCDN-203ENST00000373253 UBR7Q8N806 425 aa13.53□□□□□ -0.24
NCDN-203ENST00000373253 NIPA2Q8N8Q9 360 aa13.53□□□□□ -0.24
NCDN-203ENST00000373253 BLOC1S5Q8TDH9 187 aa13.53□□□□□ -0.24
NCDN-203ENST00000373253 EBNA1BP2Q99848 306 aaKnown RBP13.53□□□□□ -0.24
NCDN-203ENST00000373253 STARD7Q9NQZ5 370 aa13.53□□□□□ -0.24
NCDN-203ENST00000373253 GRID1Q9ULK0 1009 aa13.53□□□□□ -0.24
NCDN-203ENST00000373253 ZNF865P0CJ78 1059 aaPredicted RBP13.52□□□□□ -0.24
NCDN-203ENST00000373253 IL4RP24394 825 aa13.52□□□□□ -0.24
NCDN-203ENST00000373253 CDH5P33151 784 aaPredicted RBP13.52□□□□□ -0.24
NCDN-203ENST00000373253 SERPINB6P35237 376 aa13.52□□□□□ -0.24
NCDN-203ENST00000373253 CHRNA4P43681 627 aa13.52□□□□□ -0.24
NCDN-203ENST00000373253 NCALDP61601 193 aa13.52□□□□□ -0.24
NCDN-203ENST00000373253 ZNF460Q14592 562 aa13.52□□□□□ -0.24
NCDN-203ENST00000373253 ITIH4Q14624 930 aa13.52□□□□□ -0.24
NCDN-203ENST00000373253 FBXO48Q5FWF7 155 aa13.52□□□□□ -0.24
NCDN-203ENST00000373253 MYLK4Q86YV6 388 aaPredicted RBP13.52□□□□□ -0.24
NCDN-203ENST00000373253 IFNL1Q8IU54 200 aa13.52□□□□□ -0.24
NCDN-203ENST00000373253 CENPTQ96BT3 561 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 137.9 ms