RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 DLDP09622 509 aaKnown RBP19.24■□□□□ 0.67
USP49-202ENST00000373010 PCSK1P29120 753 aa19.24■□□□□ 0.67
USP49-202ENST00000373010 RPL9P32969 192 aaKnown RBP19.24■□□□□ 0.67
USP49-202ENST00000373010 GTF2A1P52655 376 aaPredicted RBP19.24■□□□□ 0.67
USP49-202ENST00000373010 CYS1Q717R9 158 aa19.24■□□□□ 0.67
USP49-202ENST00000373010 MARK2Q7KZI7 788 aaKnown RBP19.24■□□□□ 0.67
USP49-202ENST00000373010 MRPL10Q7Z7H8 261 aaKnown RBP19.24■□□□□ 0.67
USP49-202ENST00000373010 OR52K1Q8NGK4 314 aa19.24■□□□□ 0.67
USP49-202ENST00000373010 PRR11Q96HE9 360 aaPredicted RBP19.24■□□□□ 0.67
USP49-202ENST00000373010 TMEM209Q96SK2 561 aa19.24■□□□□ 0.67
USP49-202ENST00000373010 KLF11O14901 512 aa19.23■□□□□ 0.67
USP49-202ENST00000373010 CRHR1P34998 444 aa19.23■□□□□ 0.67
USP49-202ENST00000373010 AIF1P55008 147 aa19.23■□□□□ 0.67
USP49-202ENST00000373010 IRX4P78413 519 aa19.23■□□□□ 0.67
USP49-202ENST00000373010 TMPRSS15P98073 1019 aa19.23■□□□□ 0.67
USP49-202ENST00000373010 BST1Q10588 318 aa19.23■□□□□ 0.67
USP49-202ENST00000373010 CHI3L2Q15782 390 aa19.23■□□□□ 0.67
USP49-202ENST00000373010 CTC1Q2NKJ3 1217 aa19.23■□□□□ 0.67
USP49-202ENST00000373010 PACS1Q6VY07 963 aa19.23■□□□□ 0.67
USP49-202ENST00000373010 SAPCD2Q86UD0 394 aa19.23■□□□□ 0.67
USP49-202ENST00000373010 PGAP3Q96FM1 320 aaPredicted RBP19.23■□□□□ 0.67
USP49-202ENST00000373010 TKTL2Q9H0I9 626 aa19.23■□□□□ 0.67
USP49-202ENST00000373010 XPNPEP3Q9NQH7 507 aa19.23■□□□□ 0.67
USP49-202ENST00000373010 INPP5FQ9Y2H2 1132 aa19.23■□□□□ 0.67
USP49-202ENST00000373010 TDRD15B5MCY1 1934 aaKnown RBP19.23■□□□□ 0.67
USP49-202ENST00000373010 CEP350Q5VT06 3117 aa19.23■□□□□ 0.67
USP49-202ENST00000373010 FAM237BA0A1B0GVD1 139 aa19.23■□□□□ 0.67
USP49-202ENST00000373010 TGDSO95455 350 aa19.23■□□□□ 0.67
USP49-202ENST00000373010 ODC1P11926 461 aa19.23■□□□□ 0.67
USP49-202ENST00000373010 CD300LGQ6UXG3 332 aa19.23■□□□□ 0.67
USP49-202ENST00000373010 PDZD4Q76G19 769 aaPredicted RBP19.23■□□□□ 0.67
USP49-202ENST00000373010 STKLD1Q8NE28 680 aa19.23■□□□□ 0.67
USP49-202ENST00000373010 AGAP11Q8TF27 550 aa19.23■□□□□ 0.67
USP49-202ENST00000373010 E2F7Q96AV8 911 aa19.23■□□□□ 0.67
USP49-202ENST00000373010 WDCPQ9H6R7 721 aa19.23■□□□□ 0.67
USP49-202ENST00000373010 CSNK1G1Q9HCP0 422 aa19.23■□□□□ 0.67
USP49-202ENST00000373010 FBXO6Q9NRD1 293 aaPredicted RBP19.23■□□□□ 0.67
USP49-202ENST00000373010 ZBTB24O43167 697 aaPredicted RBP19.22■□□□□ 0.67
USP49-202ENST00000373010 ERVK-10P10266 1014 aa19.22■□□□□ 0.67
USP49-202ENST00000373010 SERPINB3P29508 390 aa19.22■□□□□ 0.67
USP49-202ENST00000373010 ARL13BQ3SXY8 428 aa19.22■□□□□ 0.67
USP49-202ENST00000373010 TIFABQ6ZNK6 161 aa19.22■□□□□ 0.67
USP49-202ENST00000373010 TAC4Q86UU9 113 aa19.22■□□□□ 0.67
USP49-202ENST00000373010 NUDCD3Q8IVD9 361 aa19.22■□□□□ 0.67
USP49-202ENST00000373010 UPF3AQ9H1J1 476 aaKnown RBP19.22■□□□□ 0.67
USP49-202ENST00000373010 OR12D3Q9UGF7 316 aa19.22■□□□□ 0.67
USP49-202ENST00000373010 ALDOAP04075 364 aaKnown RBP19.22■□□□□ 0.67
USP49-202ENST00000373010 HCAR3P49019 387 aa19.22■□□□□ 0.67
USP49-202ENST00000373010 CXCR3P49682 368 aa19.22■□□□□ 0.67
USP49-202ENST00000373010 PPIDQ08752 370 aaKnown RBP19.22■□□□□ 0.67
USP49-202ENST00000373010 MFSD14CQ5VZR4 134 aa19.22■□□□□ 0.67
USP49-202ENST00000373010 C16orf46Q6P387 395 aa19.22■□□□□ 0.67
USP49-202ENST00000373010 LRRTM3Q86VH5 581 aa19.22■□□□□ 0.67
USP49-202ENST00000373010 CDKL2Q92772 493 aa19.22■□□□□ 0.67
USP49-202ENST00000373010 RAB3IPQ96QF0 476 aaPredicted RBP19.22■□□□□ 0.67
USP49-202ENST00000373010 SPC25Q9HBM1 224 aa19.22■□□□□ 0.67
USP49-202ENST00000373010 SIRPGQ9P1W8 387 aa19.22■□□□□ 0.67
USP49-202ENST00000373010 L3MBTL1Q9Y468 752 aa19.22■□□□□ 0.67
USP49-202ENST00000373010 F8W810 466 aa19.21■□□□□ 0.67
USP49-202ENST00000373010 IL1BP01584 269 aa19.21■□□□□ 0.67
USP49-202ENST00000373010 MYL2P10916 166 aa19.21■□□□□ 0.67
USP49-202ENST00000373010 SLC8A1P32418 973 aa19.21■□□□□ 0.67
USP49-202ENST00000373010 INTS6LQ5JSJ4 861 aaKnown RBP19.21■□□□□ 0.67
USP49-202ENST00000373010 FAM171BQ6P995 826 aa19.21■□□□□ 0.67
USP49-202ENST00000373010 RASSF3Q86WH2 238 aa19.21■□□□□ 0.67
USP49-202ENST00000373010 OR10T2Q8NGX3 314 aa19.21■□□□□ 0.67
USP49-202ENST00000373010 INPP5DQ92835 1189 aa19.21■□□□□ 0.67
USP49-202ENST00000373010 FCRL3Q96P31 734 aaPredicted RBP19.21■□□□□ 0.67
USP49-202ENST00000373010 MTO1Q9Y2Z2 717 aaKnown RBP19.21■□□□□ 0.67
USP49-202ENST00000373010 RPS6KL1Q9Y6S9 549 aa19.21■□□□□ 0.67
USP49-202ENST00000373010 TPP1O14773 563 aa19.21■□□□□ 0.67
USP49-202ENST00000373010 LRIG2O94898 1065 aa19.21■□□□□ 0.67
USP49-202ENST00000373010 ASGR1P07306 291 aa19.21■□□□□ 0.67
USP49-202ENST00000373010 BPGMP07738 259 aa19.21■□□□□ 0.67
USP49-202ENST00000373010 F7P08709 466 aaPredicted RBP19.21■□□□□ 0.67
USP49-202ENST00000373010 SLC10A3P09131 477 aa19.21■□□□□ 0.67
USP49-202ENST00000373010 CNTFP26441 200 aa19.21■□□□□ 0.67
USP49-202ENST00000373010 EPHB2P29323 1055 aa19.21■□□□□ 0.67
USP49-202ENST00000373010 CD68P34810 354 aaPredicted RBP19.21■□□□□ 0.67
USP49-202ENST00000373010 ZBTB17Q13105 803 aa19.21■□□□□ 0.67
USP49-202ENST00000373010 METTL23Q86XA0 190 aa19.21■□□□□ 0.67
USP49-202ENST00000373010 CCNJLQ8IV13 435 aa19.21■□□□□ 0.67
USP49-202ENST00000373010 SCAMP5Q8TAC9 235 aa19.21■□□□□ 0.67
USP49-202ENST00000373010 SKA1Q96BD8 255 aa19.21■□□□□ 0.67
USP49-202ENST00000373010 CELF6Q96J87 481 aaKnown RBP19.21■□□□□ 0.67
USP49-202ENST00000373010 ZIC5Q96T25 663 aa19.21■□□□□ 0.67
USP49-202ENST00000373010 ACBD6Q9BR61 282 aa19.21■□□□□ 0.67
USP49-202ENST00000373010 TBC1D10AQ9BXI6 508 aa19.21■□□□□ 0.67
USP49-202ENST00000373010 ARL8BQ9NVJ2 186 aa19.21■□□□□ 0.67
USP49-202ENST00000373010 MAGED2Q9UNF1 606 aaPredicted RBP19.21■□□□□ 0.67
USP49-202ENST00000373010 HAUS5O94927 633 aa19.2■□□□□ 0.66
USP49-202ENST00000373010 F9P00740 461 aa19.2■□□□□ 0.66
USP49-202ENST00000373010 ITGB1P05556 798 aa19.2■□□□□ 0.66
USP49-202ENST00000373010 YY1P25490 414 aa19.2■□□□□ 0.66
USP49-202ENST00000373010 ZBTB16Q05516 673 aa19.2■□□□□ 0.66
USP49-202ENST00000373010 TEX44Q53QW1 395 aa19.2■□□□□ 0.66
USP49-202ENST00000373010 ZCCHC23Q6ZST2 131 aa19.2■□□□□ 0.66
USP49-202ENST00000373010 LONP2Q86WA8 852 aa19.2■□□□□ 0.66
USP49-202ENST00000373010 TRIM42Q8IWZ5 723 aa19.2■□□□□ 0.66
USP49-202ENST00000373010 RNF34Q969K3 372 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms