RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 MAP7D1Q3KQU3 841 aa20.69■□□□□ 0.9
TMEM53-205ENST00000372244 CCDC14Q49A88 953 aa20.69■□□□□ 0.9
TMEM53-205ENST00000372244 ARTNQ5T4W7 220 aa20.69■□□□□ 0.9
TMEM53-205ENST00000372244 SFMBT2Q5VUG0 894 aa20.69■□□□□ 0.9
TMEM53-205ENST00000372244 E4F1Q66K89 784 aaPredicted RBP20.69■□□□□ 0.9
TMEM53-205ENST00000372244 ACAD10Q6JQN1 1059 aa20.69■□□□□ 0.9
TMEM53-205ENST00000372244 CARNMT1Q8N4J0 409 aa20.69■□□□□ 0.9
TMEM53-205ENST00000372244 EMC1Q8N766 993 aa20.69■□□□□ 0.9
TMEM53-205ENST00000372244 CENPIQ92674 756 aaPredicted RBP20.69■□□□□ 0.9
TMEM53-205ENST00000372244 IGSF8Q969P0 613 aa20.69■□□□□ 0.9
TMEM53-205ENST00000372244 NUP58Q9BVL2 599 aa20.69■□□□□ 0.9
TMEM53-205ENST00000372244 METTL5Q9NRN9 209 aaKnown RBP20.69■□□□□ 0.9
TMEM53-205ENST00000372244 INVSQ9Y283 1065 aa20.69■□□□□ 0.9
TMEM53-205ENST00000372244 PAXBP1Q9Y5B6 917 aa20.69■□□□□ 0.9
TMEM53-205ENST00000372244 SIGLEC16A6NMB1 481 aa20.68■□□□□ 0.9
TMEM53-205ENST00000372244 LRP3O75074 770 aa20.68■□□□□ 0.9
TMEM53-205ENST00000372244 ATP5BP06576 529 aaKnown RBP20.68■□□□□ 0.9
TMEM53-205ENST00000372244 C7P10643 843 aa20.68■□□□□ 0.9
TMEM53-205ENST00000372244 KRT3P12035 628 aa20.68■□□□□ 0.9
TMEM53-205ENST00000372244 PDGFRAP16234 1089 aa20.68■□□□□ 0.9
TMEM53-205ENST00000372244 TNFAIP3P21580 790 aa20.68■□□□□ 0.9
TMEM53-205ENST00000372244 ATXN1P54253 815 aaKnown RBP20.68■□□□□ 0.9
TMEM53-205ENST00000372244 CDH18Q13634 790 aa20.68■□□□□ 0.9
TMEM53-205ENST00000372244 NFKBIBQ15653 356 aa20.68■□□□□ 0.9
TMEM53-205ENST00000372244 FUT11Q495W5 492 aa20.68■□□□□ 0.9
TMEM53-205ENST00000372244 RABGAP1LQ5R372 815 aa20.68■□□□□ 0.9
TMEM53-205ENST00000372244 ACBD5Q5T8D3 534 aaPredicted RBP20.68■□□□□ 0.9
TMEM53-205ENST00000372244 TTC39BQ5VTQ0 682 aaPredicted RBP20.68■□□□□ 0.9
TMEM53-205ENST00000372244 C14orf80Q86SX3 495 aa20.68■□□□□ 0.9
TMEM53-205ENST00000372244 C11orf74Q86VG3 221 aa20.68■□□□□ 0.9
TMEM53-205ENST00000372244 ZNF683Q8IZ20 524 aa20.68■□□□□ 0.9
TMEM53-205ENST00000372244 GPR161Q8N6U8 529 aaKnown RBP20.68■□□□□ 0.9
TMEM53-205ENST00000372244 C3orf20Q8ND61 904 aa20.68■□□□□ 0.9
TMEM53-205ENST00000372244 CYB5D2Q8WUJ1 264 aa20.68■□□□□ 0.9
TMEM53-205ENST00000372244 RXFP2Q8WXD0 754 aa20.68■□□□□ 0.9
TMEM53-205ENST00000372244 RLN3Q8WXF3 142 aa20.68■□□□□ 0.9
TMEM53-205ENST00000372244 MRGPRX1Q96LB2 322 aa20.68■□□□□ 0.9
TMEM53-205ENST00000372244 HINFPQ9BQA5 517 aa20.68■□□□□ 0.9
TMEM53-205ENST00000372244 HAUS4Q9H6D7 363 aa20.68■□□□□ 0.9
TMEM53-205ENST00000372244 SEPT11Q9NVA2 429 aaKnown RBP20.68■□□□□ 0.9
TMEM53-205ENST00000372244 KIAA1522Q9P206 1035 aaPredicted RBP20.68■□□□□ 0.9
TMEM53-205ENST00000372244 BCCIPQ9P287 314 aaKnown RBP eCLIP20.68■□□□□ 0.9
TMEM53-205ENST00000372244 CEP250Q9BV73 2442 aa20.67■□□□□ 0.9
TMEM53-205ENST00000372244 GON4LQ3T8J9 2241 aa20.67■□□□□ 0.9
TMEM53-205ENST00000372244 A0A1W2PQJ5 194 aa20.67■□□□□ 0.9
TMEM53-205ENST00000372244 H0Y626 953 aa20.67■□□□□ 0.9
TMEM53-205ENST00000372244 ZBTB24O43167 697 aaPredicted RBP20.67■□□□□ 0.9
TMEM53-205ENST00000372244 POLR2EP19388 210 aaKnown RBP20.67■□□□□ 0.9
TMEM53-205ENST00000372244 NDUFV2P19404 249 aa20.67■□□□□ 0.9
TMEM53-205ENST00000372244 RFC1P35251 1148 aaPredicted RBP20.67■□□□□ 0.9
TMEM53-205ENST00000372244 PTPN9P43378 593 aa20.67■□□□□ 0.9
TMEM53-205ENST00000372244 BYSLQ13895 437 aaKnown RBP20.67■□□□□ 0.9
TMEM53-205ENST00000372244 LRSAM1Q6UWE0 723 aa20.67■□□□□ 0.9
TMEM53-205ENST00000372244 ZNF571Q7Z3V5 609 aaPredicted RBP20.67■□□□□ 0.9
TMEM53-205ENST00000372244 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.67■□□□□ 0.9
TMEM53-205ENST00000372244 CCDC117Q8IWD4 279 aaPredicted RBP20.67■□□□□ 0.9
TMEM53-205ENST00000372244 MCOLN2Q8IZK6 566 aa20.67■□□□□ 0.9
TMEM53-205ENST00000372244 CCAR2Q8N163 923 aaKnown RBP20.67■□□□□ 0.9
TMEM53-205ENST00000372244 PGBD3Q8N328 593 aa20.67■□□□□ 0.9
TMEM53-205ENST00000372244 FRMD1Q8N878 549 aa20.67■□□□□ 0.9
TMEM53-205ENST00000372244 JOSD2Q8TAC2 188 aa20.67■□□□□ 0.9
TMEM53-205ENST00000372244 VCPIP1Q96JH7 1222 aa20.67■□□□□ 0.9
TMEM53-205ENST00000372244 HAPLN3Q96S86 360 aa20.67■□□□□ 0.9
TMEM53-205ENST00000372244 SIK2Q9H0K1 926 aa20.67■□□□□ 0.9
TMEM53-205ENST00000372244 A0A1B0GVM2 712 aa20.66■□□□□ 0.9
TMEM53-205ENST00000372244 TCAF2A6NFQ2 919 aa20.66■□□□□ 0.9
TMEM53-205ENST00000372244 DRGXA6NNA5 263 aa20.66■□□□□ 0.9
TMEM53-205ENST00000372244 RHOBTB1O94844 696 aa20.66■□□□□ 0.9
TMEM53-205ENST00000372244 GJB6O95452 261 aa20.66■□□□□ 0.9
TMEM53-205ENST00000372244 PRKCHP24723 683 aa20.66■□□□□ 0.9
TMEM53-205ENST00000372244 RDXP35241 583 aaKnown RBP20.66■□□□□ 0.9
TMEM53-205ENST00000372244 CSKP41240 450 aa20.66■□□□□ 0.9
TMEM53-205ENST00000372244 PLK1P53350 603 aa20.66■□□□□ 0.9
TMEM53-205ENST00000372244 SLC12A1Q13621 1099 aa20.66■□□□□ 0.9
TMEM53-205ENST00000372244 STARD3Q14849 445 aa20.66■□□□□ 0.9
TMEM53-205ENST00000372244 ASIC2Q16515 512 aa20.66■□□□□ 0.9
TMEM53-205ENST00000372244 WDR59Q6PJI9 974 aa20.66■□□□□ 0.9
TMEM53-205ENST00000372244 SERPINA13PQ6UXR4 307 aa20.66■□□□□ 0.9
TMEM53-205ENST00000372244 METTL3Q86U44 580 aaKnown RBP20.66■□□□□ 0.9
TMEM53-205ENST00000372244 SYN2Q92777 582 aaPredicted RBP20.66■□□□□ 0.9
TMEM53-205ENST00000372244 RPRD1AQ96P16 312 aaPredicted RBP20.66■□□□□ 0.9
TMEM53-205ENST00000372244 MKRN2Q9H000 416 aaKnown RBP20.66■□□□□ 0.9
TMEM53-205ENST00000372244 PARD6AQ9NPB6 346 aa20.66■□□□□ 0.9
TMEM53-205ENST00000372244 TAS2R14Q9NYV8 317 aa20.66■□□□□ 0.9
TMEM53-205ENST00000372244 IFNKQ9P0W0 207 aa20.66■□□□□ 0.9
TMEM53-205ENST00000372244 MBD1Q9UIS9 605 aaPredicted RBP20.66■□□□□ 0.9
TMEM53-205ENST00000372244 VANGL2Q9ULK5 521 aa20.66■□□□□ 0.9
TMEM53-205ENST00000372244 SYNCRIPO60506 623 aaKnown RBP20.65■□□□□ 0.9
TMEM53-205ENST00000372244 GZMAP12544 262 aa20.65■□□□□ 0.9
TMEM53-205ENST00000372244 BCKDHBP21953 392 aa20.65■□□□□ 0.9
TMEM53-205ENST00000372244 SDC4P31431 198 aa20.65■□□□□ 0.9
TMEM53-205ENST00000372244 IRAK1P51617 712 aa20.65■□□□□ 0.9
TMEM53-205ENST00000372244 ATP11AP98196 1134 aa20.65■□□□□ 0.9
TMEM53-205ENST00000372244 CAMK2GQ13555 558 aaPredicted RBP20.65■□□□□ 0.9
TMEM53-205ENST00000372244 ELF2Q15723 593 aa20.65■□□□□ 0.9
TMEM53-205ENST00000372244 PLEKHG6Q3KR16 790 aa20.65■□□□□ 0.9
TMEM53-205ENST00000372244 RAB6CQ53S08 254 aa20.65■□□□□ 0.9
TMEM53-205ENST00000372244 PITRM1Q5JRX3 1037 aa20.65■□□□□ 0.9
TMEM53-205ENST00000372244 PPP1R15BQ5SWA1 713 aa20.65■□□□□ 0.9
TMEM53-205ENST00000372244 SH3PXD2AQ5TCZ1 1133 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms