RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 CARD8Q9Y2G2 431 aa7.11□□□□□ -1.27
CSDE1-204ENST00000369530 SF3B1O75533 1304 aaKnown RBP eCLIP7.1□□□□□ -1.271e-6■■■■■ 28.6
CSDE1-204ENST00000369530 ITPR1Q14643 2758 aa7.1□□□□□ -1.27
CSDE1-204ENST00000369530 SH3PXD2BA1X283 911 aa7.1□□□□□ -1.27
CSDE1-204ENST00000369530 OTOL1A6NHN0 477 aaPredicted RBP7.1□□□□□ -1.27
CSDE1-204ENST00000369530 GSTT2P0CG29 244 aa7.1□□□□□ -1.27
CSDE1-204ENST00000369530 GSTT2BP0CG30 244 aa7.1□□□□□ -1.27
CSDE1-204ENST00000369530 NRIP1P48552 1158 aa7.1□□□□□ -1.27
CSDE1-204ENST00000369530 GUCY2DQ02846 1103 aa7.1□□□□□ -1.27
CSDE1-204ENST00000369530 RELAQ04206 551 aa7.1□□□□□ -1.27
CSDE1-204ENST00000369530 SPA17Q15506 151 aa7.1□□□□□ -1.27
CSDE1-204ENST00000369530 MAP7D1Q3KQU3 841 aa7.1□□□□□ -1.27
CSDE1-204ENST00000369530 ZNF528Q3MIS6 628 aa7.1□□□□□ -1.27
CSDE1-204ENST00000369530 WDR72Q3MJ13 1102 aa7.1□□□□□ -1.27
CSDE1-204ENST00000369530 BEND5Q7L4P6 421 aa7.1□□□□□ -1.27
CSDE1-204ENST00000369530 PDCD7Q8N8D1 485 aaKnown RBP7.1□□□□□ -1.27
CSDE1-204ENST00000369530 CTNNBL1Q8WYA6 563 aaPredicted RBP7.1□□□□□ -1.27
CSDE1-204ENST00000369530 HAUS1Q96CS2 278 aa7.1□□□□□ -1.27
CSDE1-204ENST00000369530 TTPALQ9BTX7 342 aa7.1□□□□□ -1.27
CSDE1-204ENST00000369530 TPK1Q9H3S4 243 aa7.1□□□□□ -1.27
CSDE1-204ENST00000369530 RBM12Q9NTZ6 932 aaKnown RBP7.1□□□□□ -1.27
CSDE1-204ENST00000369530 OSER1Q9NX31 292 aa7.1□□□□□ -1.27
CSDE1-204ENST00000369530 PLK2Q9NYY3 685 aa7.1□□□□□ -1.27
CSDE1-204ENST00000369530 AFF4Q9UHB7 1163 aaKnown RBP7.1□□□□□ -1.27
CSDE1-204ENST00000369530 CHMP2BQ9UQN3 213 aa7.1□□□□□ -1.27
CSDE1-204ENST00000369530 CETN3O15182 167 aa7.1□□□□□ -1.27
CSDE1-204ENST00000369530 POMCP01189 267 aa7.1□□□□□ -1.27
CSDE1-204ENST00000369530 FYNP06241 537 aa7.1□□□□□ -1.27
CSDE1-204ENST00000369530 ENDOUP21128 410 aaKnown RBP7.1□□□□□ -1.27
CSDE1-204ENST00000369530 PPP1R2P41236 205 aa7.1□□□□□ -1.27
CSDE1-204ENST00000369530 PTP4A2Q12974 167 aa7.1□□□□□ -1.27
CSDE1-204ENST00000369530 CATSPER4Q7RTX7 472 aa7.1□□□□□ -1.27
CSDE1-204ENST00000369530 NPAS3Q8IXF0 933 aa7.1□□□□□ -1.27
CSDE1-204ENST00000369530 ESX1Q8N693 406 aa7.1□□□□□ -1.27
CSDE1-204ENST00000369530 NRG4Q8WWG1 115 aa7.1□□□□□ -1.27
CSDE1-204ENST00000369530 DGCR14Q96DF8 476 aaKnown RBP7.1□□□□□ -1.27
CSDE1-204ENST00000369530 TWNKQ96RR1 684 aa7.1□□□□□ -1.27
CSDE1-204ENST00000369530 CHP1Q99653 195 aa7.1□□□□□ -1.27
CSDE1-204ENST00000369530 UNKQ9C0B0 810 aaKnown RBP7.1□□□□□ -1.27
CSDE1-204ENST00000369530 LACRTQ9GZZ8 138 aa7.1□□□□□ -1.27
CSDE1-204ENST00000369530 TMEM206Q9H813 350 aa7.1□□□□□ -1.27
CSDE1-204ENST00000369530 PFDN4Q9NQP4 134 aa7.1□□□□□ -1.27
CSDE1-204ENST00000369530 K7ERI5 159 aa7.1□□□□□ -1.27
CSDE1-204ENST00000369530 SUN1O94901 812 aa7.1□□□□□ -1.27
CSDE1-204ENST00000369530 EEF1GP26641 437 aaKnown RBP7.1□□□□□ -1.27
CSDE1-204ENST00000369530 CYLC1P35663 651 aaPredicted RBP7.1□□□□□ -1.27
CSDE1-204ENST00000369530 NBL1P41271 181 aa7.1□□□□□ -1.27
CSDE1-204ENST00000369530 RPS3AP61247 264 aaKnown RBP7.1□□□□□ -1.27
CSDE1-204ENST00000369530 SUZ12Q15022 739 aaKnown RBP7.1□□□□□ -1.27
CSDE1-204ENST00000369530 CBWD6Q4V339 395 aa7.1□□□□□ -1.27
CSDE1-204ENST00000369530 CBWD3Q5JTY5 395 aa7.1□□□□□ -1.27
CSDE1-204ENST00000369530 CBWD5Q5RIA9 395 aa7.1□□□□□ -1.27
CSDE1-204ENST00000369530 PRSS55Q6UWB4 352 aaPredicted RBP7.1□□□□□ -1.27
CSDE1-204ENST00000369530 FITM2Q8N6M3 262 aa7.1□□□□□ -1.27
CSDE1-204ENST00000369530 SHKBP1Q8TBC3 707 aa7.1□□□□□ -1.27
CSDE1-204ENST00000369530 AUTS2Q8WXX7 1259 aa7.1□□□□□ -1.27
CSDE1-204ENST00000369530 GRAMD1AQ96CP6 724 aa7.1□□□□□ -1.27
CSDE1-204ENST00000369530 TRIM11Q96F44 468 aa7.1□□□□□ -1.27
CSDE1-204ENST00000369530 CAPZA3Q96KX2 299 aa7.1□□□□□ -1.27
CSDE1-204ENST00000369530 C8orf48Q96LL4 319 aa7.1□□□□□ -1.27
CSDE1-204ENST00000369530 CCDC42Q96M95 316 aa7.1□□□□□ -1.27
CSDE1-204ENST00000369530 SRPK1Q96SB4 655 aaKnown RBP7.1□□□□□ -1.27
CSDE1-204ENST00000369530 STX18Q9P2W9 335 aaKnown RBP7.1□□□□□ -1.27
CSDE1-204ENST00000369530 HEXIM1O94992 359 aaKnown RBP7.09□□□□□ -1.27
CSDE1-204ENST00000369530 MSL3P1P0C860 447 aa7.09□□□□□ -1.27
CSDE1-204ENST00000369530 MYBL1P10243 752 aa7.09□□□□□ -1.27
CSDE1-204ENST00000369530 NR2F2P24468 414 aa7.09□□□□□ -1.27
CSDE1-204ENST00000369530 CRABP2P29373 138 aa7.09□□□□□ -1.27
CSDE1-204ENST00000369530 ATICP31939 592 aa7.09□□□□□ -1.27
CSDE1-204ENST00000369530 RPS9P46781 194 aaKnown RBP7.09□□□□□ -1.27
CSDE1-204ENST00000369530 KLK7P49862 253 aa7.09□□□□□ -1.27
CSDE1-204ENST00000369530 TBL3Q12788 808 aaKnown RBP7.09□□□□□ -1.27
CSDE1-204ENST00000369530 KCNMA1Q12791 1236 aa7.09□□□□□ -1.27
CSDE1-204ENST00000369530 BOLA3Q53S33 107 aa7.09□□□□□ -1.27
CSDE1-204ENST00000369530 FAM133BQ5BKY9 247 aaKnown RBP7.09□□□□□ -1.27
CSDE1-204ENST00000369530 ARHGAP17Q68EM7 881 aa7.09□□□□□ -1.27
CSDE1-204ENST00000369530 B3GNT6Q6ZMB0 384 aa7.09□□□□□ -1.27
CSDE1-204ENST00000369530 RRAGAQ7L523 313 aa7.09□□□□□ -1.27
CSDE1-204ENST00000369530 ADGRG6Q86SQ4 1221 aa7.09□□□□□ -1.27
CSDE1-204ENST00000369530 C11orf74Q86VG3 221 aa7.09□□□□□ -1.27
CSDE1-204ENST00000369530 GPD1LQ8N335 351 aa7.09□□□□□ -1.27
CSDE1-204ENST00000369530 WDTC1Q8N5D0 677 aa7.09□□□□□ -1.27
CSDE1-204ENST00000369530 PIP4K2CQ8TBX8 421 aa7.09□□□□□ -1.27
CSDE1-204ENST00000369530 OVCA2Q8WZ82 227 aa7.09□□□□□ -1.27
CSDE1-204ENST00000369530 TAF4BQ92750 862 aa7.09□□□□□ -1.27
CSDE1-204ENST00000369530 FGF14Q92915 247 aa7.09□□□□□ -1.27
CSDE1-204ENST00000369530 NXPE3Q969Y0 559 aa7.09□□□□□ -1.27
CSDE1-204ENST00000369530 SGF29Q96ES7 293 aa7.09□□□□□ -1.27
CSDE1-204ENST00000369530 FAM84AQ96KN4 292 aa7.09□□□□□ -1.27
CSDE1-204ENST00000369530 PPP1R16BQ96T49 567 aa7.09□□□□□ -1.27
CSDE1-204ENST00000369530 LRFN3Q9BTN0 628 aa7.09□□□□□ -1.27
CSDE1-204ENST00000369530 CERS4Q9HA82 394 aa7.09□□□□□ -1.27
CSDE1-204ENST00000369530 SEPT11Q9NVA2 429 aaKnown RBP7.09□□□□□ -1.27
CSDE1-204ENST00000369530 HMGXB4Q9UGU5 601 aa7.09□□□□□ -1.27
CSDE1-204ENST00000369530 WASF3Q9UPY6 502 aa7.09□□□□□ -1.27
CSDE1-204ENST00000369530 NT5C1B-RDH14C9J2C7 533 aa7.09□□□□□ -1.27
CSDE1-204ENST00000369530 VILLO15195 856 aa7.09□□□□□ -1.27
CSDE1-204ENST00000369530 CILPO75339 1184 aa7.09□□□□□ -1.27
CSDE1-204ENST00000369530 LAMP2P13473 410 aa7.09□□□□□ -1.27
CSDE1-204ENST00000369530 CCNFP41002 786 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms