RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 RNF103O00237 685 aa17.29■□□□□ 0.36
PHGDH-202ENST00000369409 RIPK2O43353 540 aa17.29■□□□□ 0.36
PHGDH-202ENST00000369409 COCHO43405 550 aa17.29■□□□□ 0.36
PHGDH-202ENST00000369409 GCATO75600 419 aa17.29■□□□□ 0.36
PHGDH-202ENST00000369409 ARHGEF15O94989 841 aa17.29■□□□□ 0.36
PHGDH-202ENST00000369409 MYOGP15173 224 aa17.29■□□□□ 0.36
PHGDH-202ENST00000369409 DNAJB1P25685 340 aa17.29■□□□□ 0.36
PHGDH-202ENST00000369409 GALNT2Q10471 571 aa17.29■□□□□ 0.36
PHGDH-202ENST00000369409 C9orf50Q5SZB4 431 aa17.29■□□□□ 0.36
PHGDH-202ENST00000369409 SYCP2LQ5T4T6 812 aa17.29■□□□□ 0.36
PHGDH-202ENST00000369409 RAP1GAP2Q684P5 730 aa17.29■□□□□ 0.36
PHGDH-202ENST00000369409 LRIG3Q6UXM1 1119 aa17.29■□□□□ 0.36
PHGDH-202ENST00000369409 ZNF276Q8N554 614 aa17.29■□□□□ 0.36
PHGDH-202ENST00000369409 DEPDC1BQ8WUY9 529 aa17.29■□□□□ 0.36
PHGDH-202ENST00000369409 POF1BQ8WVV4 589 aa17.29■□□□□ 0.36
PHGDH-202ENST00000369409 SH3GL2Q99962 352 aa17.29■□□□□ 0.36
PHGDH-202ENST00000369409 CEP41Q9BYV8 373 aa17.29■□□□□ 0.36
PHGDH-202ENST00000369409 ZNF334Q9HCZ1 680 aaPredicted RBP17.29■□□□□ 0.36
PHGDH-202ENST00000369409 MPP6Q9NZW5 540 aa17.29■□□□□ 0.36
PHGDH-202ENST00000369409 UXTQ9UBK9 157 aaPredicted RBP17.29■□□□□ 0.36
PHGDH-202ENST00000369409 HBS1LQ9Y450 684 aaKnown RBP17.29■□□□□ 0.36
PHGDH-202ENST00000369409 NFS1Q9Y697 457 aa17.29■□□□□ 0.36
PHGDH-202ENST00000369409 A0A0A0MRY4 1105 aa17.28■□□□□ 0.36
PHGDH-202ENST00000369409 C5orf60A6NFR6 353 aa17.28■□□□□ 0.36
PHGDH-202ENST00000369409 HIDE1A8MVS5 230 aa17.28■□□□□ 0.36
PHGDH-202ENST00000369409 NCAM2O15394 837 aa17.28■□□□□ 0.36
PHGDH-202ENST00000369409 KCNQ1P51787 676 aa17.28■□□□□ 0.36
PHGDH-202ENST00000369409 KPNA1P52294 538 aaPredicted RBP17.28■□□□□ 0.36
PHGDH-202ENST00000369409 AUHQ13825 339 aaKnown RBP17.28■□□□□ 0.36
PHGDH-202ENST00000369409 KCNJ11Q14654 390 aa17.28■□□□□ 0.36
PHGDH-202ENST00000369409 CEP85LQ5SZL2 805 aa17.28■□□□□ 0.36
PHGDH-202ENST00000369409 NUGGCQ68CJ6 796 aa17.28■□□□□ 0.36
PHGDH-202ENST00000369409 ARHGEF18Q6ZSZ5 1173 aa17.28■□□□□ 0.36
PHGDH-202ENST00000369409 TRMT10CQ7L0Y3 403 aaKnown RBP17.28■□□□□ 0.36
PHGDH-202ENST00000369409 ITIH5Q86UX2 942 aa17.28■□□□□ 0.36
PHGDH-202ENST00000369409 HDAC11Q96DB2 347 aa17.28■□□□□ 0.36
PHGDH-202ENST00000369409 SPATA13Q96N96 652 aa17.28■□□□□ 0.36
PHGDH-202ENST00000369409 FERMT1Q9BQL6 677 aa17.28■□□□□ 0.36
PHGDH-202ENST00000369409 EMILIN2Q9BXX0 1053 aa17.28■□□□□ 0.36
PHGDH-202ENST00000369409 KLC2Q9H0B6 622 aa17.28■□□□□ 0.36
PHGDH-202ENST00000369409 SAYSD1Q9NPB0 183 aa17.28■□□□□ 0.36
PHGDH-202ENST00000369409 RWDD3Q9Y3V2 267 aa17.28■□□□□ 0.36
PHGDH-202ENST00000369409 C2orf78A6NCI8 922 aa17.27■□□□□ 0.36
PHGDH-202ENST00000369409 GRXCR1A8MXD5 290 aa17.27■□□□□ 0.36
PHGDH-202ENST00000369409 OPA1O60313 960 aa17.27■□□□□ 0.36
PHGDH-202ENST00000369409 STK10O94804 968 aaKnown RBP17.27■□□□□ 0.36
PHGDH-202ENST00000369409 ACSL3O95573 720 aa17.27■□□□□ 0.36
PHGDH-202ENST00000369409 MX2P20592 715 aa17.27■□□□□ 0.36
PHGDH-202ENST00000369409 GARSP41250 739 aaKnown RBP17.27■□□□□ 0.36
PHGDH-202ENST00000369409 IRAK1P51617 712 aa17.27■□□□□ 0.36
PHGDH-202ENST00000369409 CBX1P83916 185 aa17.27■□□□□ 0.36
PHGDH-202ENST00000369409 PPIDQ08752 370 aaKnown RBP17.27■□□□□ 0.36
PHGDH-202ENST00000369409 SLC29A2Q14542 456 aa17.27■□□□□ 0.36
PHGDH-202ENST00000369409 HIF1AQ16665 826 aa17.27■□□□□ 0.36
PHGDH-202ENST00000369409 ANKRD20A2Q5SQ80 823 aa17.27■□□□□ 0.36
PHGDH-202ENST00000369409 ANKRD20A1Q5TYW2 823 aa17.27■□□□□ 0.36
PHGDH-202ENST00000369409 ANKRD20A3Q5VUR7 823 aa17.27■□□□□ 0.36
PHGDH-202ENST00000369409 FAM109BQ6ICB4 259 aaPredicted RBP17.27■□□□□ 0.36
PHGDH-202ENST00000369409 LILRA6Q6PI73 481 aa17.27■□□□□ 0.36
PHGDH-202ENST00000369409 KLHDC10Q6PID8 442 aa17.27■□□□□ 0.36
PHGDH-202ENST00000369409 CEP128Q6ZU80 1094 aa17.27■□□□□ 0.36
PHGDH-202ENST00000369409 ZNF683Q8IZ20 524 aa17.27■□□□□ 0.36
PHGDH-202ENST00000369409 GOLGA6L1Q8N7Z2 621 aa17.27■□□□□ 0.36
PHGDH-202ENST00000369409 UHMK1Q8TAS1 419 aaKnown RBP17.27■□□□□ 0.36
PHGDH-202ENST00000369409 SPPL3Q8TCT6 385 aa17.27■□□□□ 0.36
PHGDH-202ENST00000369409 TLR9Q9NR96 1032 aa17.27■□□□□ 0.36
PHGDH-202ENST00000369409 NDFIP2Q9NV92 336 aa17.27■□□□□ 0.36
PHGDH-202ENST00000369409 NINJ2Q9NZG7 142 aa17.27■□□□□ 0.36
PHGDH-202ENST00000369409 IRAK3Q9Y616 596 aa17.27■□□□□ 0.36
PHGDH-202ENST00000369409 C2orf71A6NGG8 1288 aa17.27■□□□□ 0.35
PHGDH-202ENST00000369409 KCNK1O00180 336 aa17.27■□□□□ 0.35
PHGDH-202ENST00000369409 CHADO15335 359 aa17.27■□□□□ 0.35
PHGDH-202ENST00000369409 METTL18O95568 372 aa17.27■□□□□ 0.35
PHGDH-202ENST00000369409 OAS1P00973 400 aaKnown RBP17.27■□□□□ 0.35
PHGDH-202ENST00000369409 LRG1P02750 347 aa17.27■□□□□ 0.35
PHGDH-202ENST00000369409 SHBGP04278 402 aa17.27■□□□□ 0.35
PHGDH-202ENST00000369409 C8AP07357 584 aa17.27■□□□□ 0.35
PHGDH-202ENST00000369409 NUDT17P0C025 328 aa17.27■□□□□ 0.35
PHGDH-202ENST00000369409 ZNF844Q08AG5 666 aa17.27■□□□□ 0.35
PHGDH-202ENST00000369409 LRRC31Q6UY01 552 aa17.27■□□□□ 0.35
PHGDH-202ENST00000369409 C4orf22Q6V702 233 aa17.27■□□□□ 0.35
PHGDH-202ENST00000369409 TMEM150AQ86TG1 271 aa17.27■□□□□ 0.35
PHGDH-202ENST00000369409 CHSY1Q86X52 802 aa17.27■□□□□ 0.35
PHGDH-202ENST00000369409 ARHGAP12Q8IWW6 846 aa17.27■□□□□ 0.35
PHGDH-202ENST00000369409 RTL3Q8N8U3 475 aaKnown RBP17.27■□□□□ 0.35
PHGDH-202ENST00000369409 C9orf72Q96LT7 481 aa17.27■□□□□ 0.35
PHGDH-202ENST00000369409 ETNK1Q9HBU6 452 aa17.27■□□□□ 0.35
PHGDH-202ENST00000369409 ATG2AQ2TAZ0 1938 aa17.26■□□□□ 0.35
PHGDH-202ENST00000369409 F5H423 210 aaPredicted RBP17.26■□□□□ 0.35
PHGDH-202ENST00000369409 SMAPO00193 183 aa17.26■□□□□ 0.35
PHGDH-202ENST00000369409 DFFAO00273 331 aa17.26■□□□□ 0.35
PHGDH-202ENST00000369409 RRP9O43818 475 aaKnown RBP17.26■□□□□ 0.35
PHGDH-202ENST00000369409 RNF40O75150 1001 aa17.26■□□□□ 0.35
PHGDH-202ENST00000369409 BANF1O75531 89 aa17.26■□□□□ 0.35
PHGDH-202ENST00000369409 GLUD1P00367 558 aa17.26■□□□□ 0.35
PHGDH-202ENST00000369409 IFFO1Q0D2I5 559 aa17.26■□□□□ 0.35
PHGDH-202ENST00000369409 WASHC5Q12768 1159 aa17.26■□□□□ 0.35
PHGDH-202ENST00000369409 FASTKD3Q14CZ7 662 aaKnown RBP17.26■□□□□ 0.35
PHGDH-202ENST00000369409 KYNUQ16719 465 aa17.26■□□□□ 0.35
PHGDH-202ENST00000369409 NADSYN1Q6IA69 706 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms