RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 TP53INP2Q8IXH6 220 aa24.59■■□□□ 1.53
SNX3-203ENST00000368979 CCDC33Q8N5R6 958 aa24.59■■□□□ 1.53
SNX3-203ENST00000368979 NETO2Q8NC67 525 aa24.59■■□□□ 1.53
SNX3-203ENST00000368979 BBOF1Q8ND07 529 aa24.59■■□□□ 1.53
SNX3-203ENST00000368979 FBXO25Q8TCJ0 367 aa24.59■■□□□ 1.53
SNX3-203ENST00000368979 TFB1MQ8WVM0 346 aaKnown RBP24.59■■□□□ 1.53
SNX3-203ENST00000368979 AZIN2Q96A70 460 aa24.59■■□□□ 1.53
SNX3-203ENST00000368979 SLC22A12Q96S37 553 aa24.59■■□□□ 1.53
SNX3-203ENST00000368979 TRPC7Q9HCX4 862 aa24.59■■□□□ 1.53
SNX3-203ENST00000368979 GKN1Q9NS71 199 aa24.59■■□□□ 1.53
SNX3-203ENST00000368979 HCFC2Q9Y5Z7 792 aa24.59■■□□□ 1.53
SNX3-203ENST00000368979 PPP1R12AO14974 1030 aaPredicted RBP24.58■■□□□ 1.53
SNX3-203ENST00000368979 ACSL4O60488 711 aa24.58■■□□□ 1.53
SNX3-203ENST00000368979 POU2F2P09086 479 aa24.58■■□□□ 1.53
SNX3-203ENST00000368979 MBL2P11226 248 aaPredicted RBP24.58■■□□□ 1.53
SNX3-203ENST00000368979 RPL22P35268 128 aaKnown RBP24.58■■□□□ 1.53
SNX3-203ENST00000368979 GALNT2Q10471 571 aa24.58■■□□□ 1.53
SNX3-203ENST00000368979 FBXL22Q6P050 247 aa24.58■■□□□ 1.53
SNX3-203ENST00000368979 LRRC31Q6UY01 552 aa24.58■■□□□ 1.53
SNX3-203ENST00000368979 NLRP14Q86W24 1093 aa24.58■■□□□ 1.53
SNX3-203ENST00000368979 RTL3Q8N8U3 475 aaKnown RBP24.58■■□□□ 1.53
SNX3-203ENST00000368979 GDPD5Q8WTR4 605 aa24.58■■□□□ 1.53
SNX3-203ENST00000368979 LRRN4Q8WUT4 740 aa24.58■■□□□ 1.53
SNX3-203ENST00000368979 GCNAQ96QF7 691 aa24.58■■□□□ 1.53
SNX3-203ENST00000368979 SLC28A3Q9HAS3 691 aa24.58■■□□□ 1.53
SNX3-203ENST00000368979 HCFC1R1Q9NWW0 138 aa24.58■■□□□ 1.53
SNX3-203ENST00000368979 DPP7Q9UHL4 492 aa24.58■■□□□ 1.53
SNX3-203ENST00000368979 EPOPA6NHQ4 379 aa24.57■■□□□ 1.52
SNX3-203ENST00000368979 DRGXA6NNA5 263 aa24.57■■□□□ 1.52
SNX3-203ENST00000368979 NRG2O14511 850 aaPredicted RBP24.57■■□□□ 1.52
SNX3-203ENST00000368979 DNALI1O14645 258 aaPredicted RBP24.57■■□□□ 1.52
SNX3-203ENST00000368979 NCAM2O15394 837 aa24.57■■□□□ 1.52
SNX3-203ENST00000368979 MYL4P12829 197 aa24.57■■□□□ 1.52
SNX3-203ENST00000368979 VAV1P15498 845 aa24.57■■□□□ 1.52
SNX3-203ENST00000368979 NRLP54845 237 aa24.57■■□□□ 1.52
SNX3-203ENST00000368979 GPS1Q13098 491 aa24.57■■□□□ 1.52
SNX3-203ENST00000368979 P3H1Q32P28 736 aa24.57■■□□□ 1.52
SNX3-203ENST00000368979 IZUMO3Q5VZ72 239 aa24.57■■□□□ 1.52
SNX3-203ENST00000368979 RHBDF2Q6PJF5 856 aa24.57■■□□□ 1.52
SNX3-203ENST00000368979 CHSY1Q86X52 802 aa24.57■■□□□ 1.52
SNX3-203ENST00000368979 LZTR1Q8N653 840 aa24.57■■□□□ 1.52
SNX3-203ENST00000368979 ARL14EPQ8N8R7 260 aaPredicted RBP24.57■■□□□ 1.52
SNX3-203ENST00000368979 CYP2S1Q96SQ9 504 aa24.57■■□□□ 1.52
SNX3-203ENST00000368979 FMO2Q99518 471 aa24.57■■□□□ 1.52
SNX3-203ENST00000368979 LGMNQ99538 433 aa24.57■■□□□ 1.52
SNX3-203ENST00000368979 ZYG11BQ9C0D3 744 aa24.57■■□□□ 1.52
SNX3-203ENST00000368979 ATXN3LQ9H3M9 355 aa24.57■■□□□ 1.52
SNX3-203ENST00000368979 PRDM12Q9H4Q4 367 aa24.57■■□□□ 1.52
SNX3-203ENST00000368979 ZDHHC7Q9NXF8 308 aa24.57■■□□□ 1.52
SNX3-203ENST00000368979 MPP6Q9NZW5 540 aa24.57■■□□□ 1.52
SNX3-203ENST00000368979 A0A1W2PRU2 124 aa24.56■■□□□ 1.52
SNX3-203ENST00000368979 FGF19O95750 216 aa24.56■■□□□ 1.52
SNX3-203ENST00000368979 KLKB1P03952 638 aa24.56■■□□□ 1.52
SNX3-203ENST00000368979 RHOQP17081 205 aa24.56■■□□□ 1.52
SNX3-203ENST00000368979 PTPN2P17706 415 aa24.56■■□□□ 1.52
SNX3-203ENST00000368979 PFKLP17858 780 aa24.56■■□□□ 1.52
SNX3-203ENST00000368979 HDCP19113 662 aa24.56■■□□□ 1.52
SNX3-203ENST00000368979 TACR2P21452 398 aa24.56■■□□□ 1.52
SNX3-203ENST00000368979 CORO1AP31146 461 aaKnown RBP24.56■■□□□ 1.52
SNX3-203ENST00000368979 SLC11A2P49281 568 aa24.56■■□□□ 1.52
SNX3-203ENST00000368979 IRAK1P51617 712 aa24.56■■□□□ 1.52
SNX3-203ENST00000368979 ITGA8P53708 1063 aa24.56■■□□□ 1.52
SNX3-203ENST00000368979 RBM10P98175 930 aaKnown RBP24.56■■□□□ 1.52
SNX3-203ENST00000368979 C5orf22Q49AR2 442 aa24.56■■□□□ 1.52
SNX3-203ENST00000368979 FAM133BQ5BKY9 247 aaKnown RBP24.56■■□□□ 1.52
SNX3-203ENST00000368979 PRPF38BQ5VTL8 546 aaKnown RBP24.56■■□□□ 1.52
SNX3-203ENST00000368979 HEATR6Q6AI08 1181 aaKnown RBP24.56■■□□□ 1.52
SNX3-203ENST00000368979 RBM23Q86U06 439 aaKnown RBP24.56■■□□□ 1.52
SNX3-203ENST00000368979 TDHQ8IZJ6 230 aa24.56■■□□□ 1.52
SNX3-203ENST00000368979 IGSF8Q969P0 613 aa24.56■■□□□ 1.52
SNX3-203ENST00000368979 LRRC45Q96CN5 670 aa24.56■■□□□ 1.52
SNX3-203ENST00000368979 HDAC11Q96DB2 347 aa24.56■■□□□ 1.52
SNX3-203ENST00000368979 GDAP1L1Q96MZ0 367 aa24.56■■□□□ 1.52
SNX3-203ENST00000368979 ADAM7Q9H2U9 754 aa24.56■■□□□ 1.52
SNX3-203ENST00000368979 DNMT3BQ9UBC3 853 aaKnown RBP24.56■■□□□ 1.52
SNX3-203ENST00000368979 GOLGA6L7A0A1B0GV03 622 aa24.56■■□□□ 1.52
SNX3-203ENST00000368979 MX2P20592 715 aa24.56■■□□□ 1.52
SNX3-203ENST00000368979 CCR2P41597 374 aa24.56■■□□□ 1.52
SNX3-203ENST00000368979 SLC7A9P82251 487 aa24.56■■□□□ 1.52
SNX3-203ENST00000368979 CAV1Q03135 178 aa24.56■■□□□ 1.52
SNX3-203ENST00000368979 PPIDQ08752 370 aaKnown RBP24.56■■□□□ 1.52
SNX3-203ENST00000368979 DUSP6Q16828 381 aa24.56■■□□□ 1.52
SNX3-203ENST00000368979 AFMIDQ63HM1 303 aa24.56■■□□□ 1.52
SNX3-203ENST00000368979 HIBCHQ6NVY1 386 aaPredicted RBP24.56■■□□□ 1.52
SNX3-203ENST00000368979 ARHGAP12Q8IWW6 846 aa24.56■■□□□ 1.52
SNX3-203ENST00000368979 HTR3CQ8WXA8 447 aa24.56■■□□□ 1.52
SNX3-203ENST00000368979 WBP2Q969T9 261 aa24.56■■□□□ 1.52
SNX3-203ENST00000368979 FUT8Q9BYC5 575 aa24.56■■□□□ 1.52
SNX3-203ENST00000368979 BRD8Q9H0E9 1235 aa24.56■■□□□ 1.52
SNX3-203ENST00000368979 TMEM248Q9NWD8 314 aa24.56■■□□□ 1.52
SNX3-203ENST00000368979 SMPD4Q9NXE4 827 aa24.56■■□□□ 1.52
SNX3-203ENST00000368979 LAMA2P24043 3122 aaKnown RBP24.55■■□□□ 1.52
SNX3-203ENST00000368979 CHD9Q3L8U1 2897 aa24.55■■□□□ 1.52
SNX3-203ENST00000368979 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP24.55■■□□□ 1.52
SNX3-203ENST00000368979 XYLBO75191 536 aa24.55■■□□□ 1.52
SNX3-203ENST00000368979 ZNF189O75820 626 aaPredicted RBP24.55■■□□□ 1.52
SNX3-203ENST00000368979 IRF1P10914 325 aa24.55■■□□□ 1.52
SNX3-203ENST00000368979 GJA1P17302 382 aa24.55■■□□□ 1.52
SNX3-203ENST00000368979 SLC6A4P31645 630 aa24.55■■□□□ 1.52
SNX3-203ENST00000368979 TNNT3P45378 269 aaPredicted RBP24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms