RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 CORO6Q6QEF8 472 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 RCOR2Q8IZ40 523 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 GUF1Q8N442 669 aaKnown RBP8.82□□□□□ -1
SYNE1-206ENST00000367253 TMEM47Q9BQJ4 181 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 MLPHQ9BV36 600 aaPredicted RBP8.82□□□□□ -1
SYNE1-206ENST00000367253 KIAA1683Q9H0B3 1180 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 NOD2Q9HC29 1040 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 CCDC59Q9P031 241 aaKnown RBP8.82□□□□□ -1
SYNE1-206ENST00000367253 SUCOQ9UBS9 1254 aaKnown RBP8.82□□□□□ -1
SYNE1-206ENST00000367253 PRPF3O43395 683 aaKnown RBP8.82□□□□□ -1
SYNE1-206ENST00000367253 PPM1BO75688 479 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 COX7A2P14406 83 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 SYN1P17600 705 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 FEN1P39748 380 aaKnown RBP8.82□□□□□ -1
SYNE1-206ENST00000367253 KDSRQ06136 332 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 NR5A1Q13285 461 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 LRRC14Q15048 493 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 CXCL17Q6UXB2 119 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 C8orf48Q96LL4 319 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 PUS3Q9BZE2 481 aaKnown RBP8.82□□□□□ -1
SYNE1-206ENST00000367253 CERS4Q9HA82 394 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 SLC2A4RGQ9NR83 387 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 ANKEF1Q9NU02 776 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 SMARCAL1Q9NZC9 954 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 DTNAQ9Y4J8 743 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 SLC12A8A0AV02 714 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 DTNBO60941 627 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 PTPN6P29350 595 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 TKTP29401 623 aaKnown RBP8.82□□□□□ -1
SYNE1-206ENST00000367253 SULT1E1P49888 294 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 GPR142Q7Z601 462 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 ACOT1Q86TX2 421 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 LCORLQ8N3X6 602 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 OTUD7AQ8TE49 926 aaPredicted RBP8.82□□□□□ -1
SYNE1-206ENST00000367253 UTP15Q8TED0 518 aaKnown RBP8.82□□□□□ -1
SYNE1-206ENST00000367253 BTN2A2Q8WVV5 523 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 LXNQ9BS40 222 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 TTYH1Q9H313 450 aaPredicted RBP8.82□□□□□ -1
SYNE1-206ENST00000367253 VIPAS39Q9H9C1 493 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 C17orf75Q9HAS0 396 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 CYLDQ9NQC7 956 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 QPCTLQ9NXS2 382 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 KIAA1257Q9ULG3 409 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 PXDNLA1KZ92 1463 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 MEGF6O75095 1541 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 CAMTA2O94983 1202 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 PTPN2P17706 415 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 YWHAQP27348 245 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 AKT2P31751 481 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 CHRNA3P32297 505 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 ABCE1P61221 599 aaKnown RBP8.82□□□□□ -1
SYNE1-206ENST00000367253 COX10Q12887 443 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 WDR72Q3MJ13 1102 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 ATAD3CQ5T2N8 411 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 ARHGAP17Q68EM7 881 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 ANKRD40Q6AI12 368 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 CHRDL2Q6WN34 429 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 AGMOQ6ZNB7 445 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 P3H2Q8IVL5 708 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 ZBTB8BQ8NAP8 495 aaPredicted RBP8.82□□□□□ -1
SYNE1-206ENST00000367253 TSPAN17Q96FV3 270 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 MRPL48Q96GC5 212 aaKnown RBP8.82□□□□□ -1
SYNE1-206ENST00000367253 ZNF512BQ96KM6 892 aaPredicted RBP8.82□□□□□ -1
SYNE1-206ENST00000367253 PCDH12Q9NPG4 1184 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.82□□□□□ -1
SYNE1-206ENST00000367253 KCND2Q9NZV8 630 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 COG5Q9UP83 839 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 RBAK-RBAKDNI3L0D1 243 aa8.81□□□□□ -1
SYNE1-206ENST00000367253 SLC16A4O15374 487 aa8.81□□□□□ -1
SYNE1-206ENST00000367253 SEPT4O43236 478 aa8.81□□□□□ -1
SYNE1-206ENST00000367253 MFAP3LO75121 409 aa8.81□□□□□ -1
SYNE1-206ENST00000367253 YWHABP31946 246 aaKnown RBP8.81□□□□□ -1
SYNE1-206ENST00000367253 PER3P56645 1201 aa8.81□□□□□ -1
SYNE1-206ENST00000367253 GSTA3Q16772 222 aa8.81□□□□□ -1
SYNE1-206ENST00000367253 C2orf27AQ580R0 203 aa8.81□□□□□ -1
SYNE1-206ENST00000367253 ALKBH5Q6P6C2 394 aaKnown RBP8.81□□□□□ -1
SYNE1-206ENST00000367253 TTC33Q6PID6 262 aaPredicted RBP8.81□□□□□ -1
SYNE1-206ENST00000367253 PAOXQ6QHF9 649 aa8.81□□□□□ -1
SYNE1-206ENST00000367253 RELL1Q8IUW5 271 aa8.81□□□□□ -1
SYNE1-206ENST00000367253 FBXO16Q8IX29 292 aaPredicted RBP8.81□□□□□ -1
SYNE1-206ENST00000367253 THRSPQ92748 146 aa8.81□□□□□ -1
SYNE1-206ENST00000367253 CLIC6Q96NY7 704 aa8.81□□□□□ -1
SYNE1-206ENST00000367253 ADAM22Q9P0K1 906 aa8.81□□□□□ -1
SYNE1-206ENST00000367253 MYO1GB0I1T2 1018 aa8.81□□□□□ -1
SYNE1-206ENST00000367253 CNOT3O75175 753 aaKnown RBP8.81□□□□□ -1
SYNE1-206ENST00000367253 TJP3O95049 919 aa8.81□□□□□ -1
SYNE1-206ENST00000367253 ENO1P06733 434 aaKnown RBP8.81□□□□□ -1
SYNE1-206ENST00000367253 CDH3P22223 829 aa8.81□□□□□ -1
SYNE1-206ENST00000367253 IL32P24001 234 aa8.81□□□□□ -1
SYNE1-206ENST00000367253 MAGEA2P43356 314 aa8.81□□□□□ -1
SYNE1-206ENST00000367253 POU5F1BQ06416 359 aa8.81□□□□□ -1
SYNE1-206ENST00000367253 DHX34Q14147 1143 aaKnown RBP8.81□□□□□ -1
SYNE1-206ENST00000367253 SLC39A14Q15043 492 aa8.81□□□□□ -1
SYNE1-206ENST00000367253 KLHL24Q6TFL4 600 aa8.81□□□□□ -1
SYNE1-206ENST00000367253 TRPM8Q7Z2W7 1104 aa8.81□□□□□ -1
SYNE1-206ENST00000367253 ZNF668Q96K58 619 aaPredicted RBP8.81□□□□□ -1
SYNE1-206ENST00000367253 SLC13A1Q9BZW2 595 aa8.81□□□□□ -1
SYNE1-206ENST00000367253 IARS2Q9NSE4 1012 aaKnown RBP8.81□□□□□ -1
SYNE1-206ENST00000367253 MKS1Q9NXB0 559 aa8.81□□□□□ -1
SYNE1-206ENST00000367253 NALCNQ8IZF0 1738 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms