RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 SQORQ9Y6N5 450 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 NUP205Q92621 2012 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 CPDO75976 1380 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 SIN3BO75182 1162 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 BANF1O75531 89 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 RPN2P04844 631 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 PCNAP12004 261 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 NOS3P29474 1203 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 VAMP7P51809 220 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 KCNQ4P56696 695 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 RNASE12Q5GAN4 147 aaKnown RBP11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 XXYLT1Q8NBI6 393 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 MCFD2Q8NI22 146 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 PI4KBQ9UBF8 816 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 H2AFYO75367 372 aaKnown RBP11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 ASNSP08243 561 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 PLCL1Q15111 1095 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 TMC7Q7Z402 723 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 CENPSQ8N2Z9 138 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 MNTQ99583 582 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 RBBP8Q99708 897 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 LIN28AQ9H9Z2 209 aaKnown RBP11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 ADAM30Q9UKF2 790 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 ATP10BO94823 1461 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 SSU72P8A0A1W2PR75 194 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 C2CD2LO14523 706 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 PIAS1O75925 651 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 TYW3Q6IPR3 259 aaKnown RBP11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 GPD1LQ8N335 351 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 POF1BQ8WVV4 589 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 CKAP2Q8WWK9 683 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 ZC3H10Q96K80 434 aaKnown RBP11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 TRNT1Q96Q11 434 aaKnown RBP11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 MRPL4Q9BYD3 311 aaKnown RBP11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 MAF1Q9H063 256 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 MED28Q9H204 178 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 EFCAB1Q9HAE3 211 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 RAB6BQ9NRW1 208 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 POLR3BQ9NW08 1133 aaPredicted RBP11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 STARD13Q9Y3M8 1113 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 ANKARQ7Z5J8 1434 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 JAK3P52333 1124 aa11.28□□□□□ -0.6
CDC42BPA-205ENST00000366769 FAXCQ5TGI0 409 aa11.28□□□□□ -0.6
CDC42BPA-205ENST00000366769 TBC1D21Q8IYX1 336 aa11.28□□□□□ -0.6
CDC42BPA-205ENST00000366769 LRRC17Q8N6Y2 441 aa11.28□□□□□ -0.6
CDC42BPA-205ENST00000366769 CCDC3Q9BQI4 270 aa11.28□□□□□ -0.6
CDC42BPA-205ENST00000366769 ZNF302Q9NR11 478 aa11.28□□□□□ -0.6
CDC42BPA-205ENST00000366769 TRMT6Q9UJA5 497 aaKnown RBP11.28□□□□□ -0.6
CDC42BPA-205ENST00000366769 CDK5RAP2Q96SN8 1893 aa11.28□□□□□ -0.6
CDC42BPA-205ENST00000366769 ATN1P54259 1190 aaPredicted RBP11.28□□□□□ -0.6
CDC42BPA-205ENST00000366769 WDR45BQ5MNZ6 344 aa11.28□□□□□ -0.6
CDC42BPA-205ENST00000366769 OSBPL11Q9BXB4 747 aa11.28□□□□□ -0.6
CDC42BPA-205ENST00000366769 NOL11Q9H8H0 719 aaKnown RBP11.28□□□□□ -0.6
CDC42BPA-205ENST00000366769 ZNF608Q9ULD9 1512 aaPredicted RBP11.28□□□□□ -0.6
CDC42BPA-205ENST00000366769 HTR3EA5X5Y0 456 aa11.28□□□□□ -0.6
CDC42BPA-205ENST00000366769 CDCA2Q69YH5 1023 aaPredicted RBP11.28□□□□□ -0.6
CDC42BPA-205ENST00000366769 RAET1EQ8TD07 263 aa11.28□□□□□ -0.6
CDC42BPA-205ENST00000366769 IPCEF1Q8WWN9 437 aaPredicted RBP11.28□□□□□ -0.6
CDC42BPA-205ENST00000366769 PRKCBP05771 671 aa11.28□□□□□ -0.6
CDC42BPA-205ENST00000366769 KLHDC7AQ5VTJ3 777 aa11.28□□□□□ -0.6
CDC42BPA-205ENST00000366769 EDC4Q6P2E9 1401 aaKnown RBP11.28□□□□□ -0.6
CDC42BPA-205ENST00000366769 PTBP2Q9UKA9 531 aaKnown RBP11.28□□□□□ -0.6
CDC42BPA-205ENST00000366769 PADI4Q9UM07 663 aa11.28□□□□□ -0.6
CDC42BPA-205ENST00000366769 SNX7Q9UNH6 387 aa11.28□□□□□ -0.6
CDC42BPA-205ENST00000366769 TAF6LQ9Y6J9 622 aa11.28□□□□□ -0.6
CDC42BPA-205ENST00000366769 TBXAS1P24557 533 aaPredicted RBP11.28□□□□□ -0.6
CDC42BPA-205ENST00000366769 ADSSP30520 456 aa11.28□□□□□ -0.6
CDC42BPA-205ENST00000366769 ANKDD1AQ495B1 522 aa11.28□□□□□ -0.6
CDC42BPA-205ENST00000366769 METTL21CQ5VZV1 264 aa11.28□□□□□ -0.6
CDC42BPA-205ENST00000366769 ECHDC2Q86YB7 292 aa11.28□□□□□ -0.6
CDC42BPA-205ENST00000366769 ZFAND2BQ8WV99 257 aa11.28□□□□□ -0.6
CDC42BPA-205ENST00000366769 SPATA33Q96N06 139 aa11.28□□□□□ -0.6
CDC42BPA-205ENST00000366769 SLC4A5Q9BY07 1137 aa11.28□□□□□ -0.6
CDC42BPA-205ENST00000366769 PTPRHQ9HD43 1115 aa11.28□□□□□ -0.6
CDC42BPA-205ENST00000366769 PIK3CDO00329 1044 aa11.28□□□□□ -0.6
CDC42BPA-205ENST00000366769 CTDNEP1O95476 244 aa11.28□□□□□ -0.6
CDC42BPA-205ENST00000366769 MT-CO1P00395 513 aa11.28□□□□□ -0.6
CDC42BPA-205ENST00000366769 TUBP50607 506 aa11.28□□□□□ -0.6
CDC42BPA-205ENST00000366769 FITM2Q8N6M3 262 aa11.28□□□□□ -0.6
CDC42BPA-205ENST00000366769 KBTBD8Q8NFY9 601 aa11.28□□□□□ -0.6
CDC42BPA-205ENST00000366769 FNDC8Q8TC99 324 aa11.28□□□□□ -0.6
CDC42BPA-205ENST00000366769 THAP2Q9H0W7 228 aa11.28□□□□□ -0.6
CDC42BPA-205ENST00000366769 RAVER2Q9HCJ3 691 aaKnown RBP11.28□□□□□ -0.6
CDC42BPA-205ENST00000366769 CLTBP09497 229 aa11.28□□□□□ -0.6
CDC42BPA-205ENST00000366769 AUHQ13825 339 aaKnown RBP11.28□□□□□ -0.6
CDC42BPA-205ENST00000366769 TSNQ15631 228 aaKnown RBP11.28□□□□□ -0.6
CDC42BPA-205ENST00000366769 C8orf59Q8N0T1 100 aaPredicted RBP11.28□□□□□ -0.6
CDC42BPA-205ENST00000366769 C2orf69Q8N8R5 385 aa11.28□□□□□ -0.6
CDC42BPA-205ENST00000366769 PGM2Q96G03 612 aa11.28□□□□□ -0.6
CDC42BPA-205ENST00000366769 KLHL1Q9NR64 748 aa11.28□□□□□ -0.6
CDC42BPA-205ENST00000366769 RPS6KL1Q9Y6S9 549 aa11.28□□□□□ -0.6
CDC42BPA-205ENST00000366769 LDLRP01130 860 aa11.28□□□□□ -0.6
CDC42BPA-205ENST00000366769 ELL3Q9HB65 397 aaPredicted RBP11.28□□□□□ -0.6
CDC42BPA-205ENST00000366769 KNOP1Q1ED39 458 aaKnown RBP11.28□□□□□ -0.6
CDC42BPA-205ENST00000366769 VPS37AQ8NEZ2 397 aa11.28□□□□□ -0.6
CDC42BPA-205ENST00000366769 FAM167AQ96KS9 214 aa11.28□□□□□ -0.6
CDC42BPA-205ENST00000366769 RNF145Q96MT1 663 aa11.28□□□□□ -0.6
CDC42BPA-205ENST00000366769 TRIM9Q9C026 710 aa11.28□□□□□ -0.6
CDC42BPA-205ENST00000366769 DYRK3O43781 588 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms