RNA–Protein interactions for RNA: ENST00000360859.10

COL9A1-203, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-203ENST00000360859 GANCQ8TET4 914 aa18.03■□□□□ 0.48
COL9A1-203ENST00000360859 KAT5Q92993 513 aa18.03■□□□□ 0.48
COL9A1-203ENST00000360859 FCRL2Q96LA5 508 aaPredicted RBP18.03■□□□□ 0.48
COL9A1-203ENST00000360859 MRGPRX3Q96LB0 322 aa18.03■□□□□ 0.48
COL9A1-203ENST00000360859 HSFY1Q96LI6 401 aa18.03■□□□□ 0.48
COL9A1-203ENST00000360859 MIS12Q9H081 205 aa18.03■□□□□ 0.48
COL9A1-203ENST00000360859 METTL14Q9HCE5 456 aaKnown RBP18.03■□□□□ 0.48
COL9A1-203ENST00000360859 SCML1Q9UN30 329 aa18.03■□□□□ 0.48
COL9A1-203ENST00000360859 RAXQ9Y2V3 346 aa18.03■□□□□ 0.48
COL9A1-203ENST00000360859 ADAMTS20P59510 1910 aa18.03■□□□□ 0.48
COL9A1-203ENST00000360859 FAM47DPA6NHR8 397 aa18.02■□□□□ 0.48
COL9A1-203ENST00000360859 SIN3BO75182 1162 aa18.02■□□□□ 0.48
COL9A1-203ENST00000360859 SMC2O95347 1197 aa18.02■□□□□ 0.48
COL9A1-203ENST00000360859 ASLP04424 464 aa18.02■□□□□ 0.48
COL9A1-203ENST00000360859 STILQ15468 1287 aa18.02■□□□□ 0.48
COL9A1-203ENST00000360859 COL28A1Q2UY09 1125 aa18.02■□□□□ 0.48
COL9A1-203ENST00000360859 HNRNPA1L2Q32P51 320 aaKnown RBP18.02■□□□□ 0.48
COL9A1-203ENST00000360859 C9orf64Q5T6V5 341 aa18.02■□□□□ 0.48
COL9A1-203ENST00000360859 ADAT2Q7Z6V5 191 aaKnown RBP18.02■□□□□ 0.48
COL9A1-203ENST00000360859 DHX40Q8IX18 779 aaKnown RBP18.02■□□□□ 0.48
COL9A1-203ENST00000360859 GALNT15Q8N3T1 639 aa18.02■□□□□ 0.48
COL9A1-203ENST00000360859 CARNMT1Q8N4J0 409 aa18.02■□□□□ 0.48
COL9A1-203ENST00000360859 LMO3Q8TAP4 145 aa18.02■□□□□ 0.48
COL9A1-203ENST00000360859 DQX1Q8TE96 717 aaKnown RBP18.02■□□□□ 0.48
COL9A1-203ENST00000360859 TMEM131Q92545 1883 aa18.02■□□□□ 0.48
COL9A1-203ENST00000360859 DDX50Q9BQ39 737 aaKnown RBP18.02■□□□□ 0.48
COL9A1-203ENST00000360859 NUCKS1Q9H1E3 243 aaKnown RBP18.02■□□□□ 0.48
COL9A1-203ENST00000360859 FBXL12Q9NXK8 326 aa18.02■□□□□ 0.48
COL9A1-203ENST00000360859 SERGEFQ9UGK8 458 aa18.02■□□□□ 0.48
COL9A1-203ENST00000360859 TYW5A2RUC4 315 aaKnown RBP18.01■□□□□ 0.47
COL9A1-203ENST00000360859 VILLO15195 856 aa18.01■□□□□ 0.47
COL9A1-203ENST00000360859 MID1O15344 667 aa18.01■□□□□ 0.47
COL9A1-203ENST00000360859 RNASEH1O60930 286 aaKnown RBP18.01■□□□□ 0.47
COL9A1-203ENST00000360859 GALCP54803 685 aa18.01■□□□□ 0.47
COL9A1-203ENST00000360859 RACK1P63244 317 aaKnown RBP18.01■□□□□ 0.47
COL9A1-203ENST00000360859 IL9RQ01113 521 aa18.01■□□□□ 0.47
COL9A1-203ENST00000360859 CDH18Q13634 790 aa18.01■□□□□ 0.47
COL9A1-203ENST00000360859 ARID5BQ14865 1188 aa18.01■□□□□ 0.47
COL9A1-203ENST00000360859 ACAP1Q15027 740 aa18.01■□□□□ 0.47
COL9A1-203ENST00000360859 CST6Q15828 149 aa18.01■□□□□ 0.47
COL9A1-203ENST00000360859 FSCBQ5H9T9 825 aa18.01■□□□□ 0.47
COL9A1-203ENST00000360859 MS4A13Q5J8X5 152 aa18.01■□□□□ 0.47
COL9A1-203ENST00000360859 NCEH1Q6PIU2 408 aa18.01■□□□□ 0.47
COL9A1-203ENST00000360859 MMS22LQ6ZRQ5 1243 aa18.01■□□□□ 0.47
COL9A1-203ENST00000360859 PDZD3Q86UT5 571 aa18.01■□□□□ 0.47
COL9A1-203ENST00000360859 CFAP52Q8N1V2 620 aa18.01■□□□□ 0.47
COL9A1-203ENST00000360859 KDM1BQ8NB78 822 aa18.01■□□□□ 0.47
COL9A1-203ENST00000360859 SMARCE1Q969G3 411 aa18.01■□□□□ 0.47
COL9A1-203ENST00000360859 CEP63Q96MT8 703 aa18.01■□□□□ 0.47
COL9A1-203ENST00000360859 ACE2Q9BYF1 805 aaPredicted RBP18.01■□□□□ 0.47
COL9A1-203ENST00000360859 GTPBP4Q9BZE4 634 aaKnown RBP18.01■□□□□ 0.47
COL9A1-203ENST00000360859 DKK4Q9UBT3 224 aa18.01■□□□□ 0.47
COL9A1-203ENST00000360859 ERVW-1Q9UQF0 538 aa18.01■□□□□ 0.47
COL9A1-203ENST00000360859 NAALADL1Q9UQQ1 740 aa18.01■□□□□ 0.47
COL9A1-203ENST00000360859 TLR6Q9Y2C9 796 aa18.01■□□□□ 0.47
COL9A1-203ENST00000360859 LAMA5O15230 3695 aa18.01■□□□□ 0.47
COL9A1-203ENST00000360859 KNL1Q8NG31 2342 aa18■□□□□ 0.47
COL9A1-203ENST00000360859 A0A1W2PP55 124 aa18■□□□□ 0.47
COL9A1-203ENST00000360859 A0A1W2PPC4 97 aa18■□□□□ 0.47
COL9A1-203ENST00000360859 FAM149AA5PLN7 773 aa18■□□□□ 0.47
COL9A1-203ENST00000360859 PAPSS1O43252 624 aaPredicted RBP18■□□□□ 0.47
COL9A1-203ENST00000360859 DFNA5O60443 496 aa18■□□□□ 0.47
COL9A1-203ENST00000360859 CTSOP43234 321 aaPredicted RBP18■□□□□ 0.47
COL9A1-203ENST00000360859 C21orf59P57076 290 aa18■□□□□ 0.47
COL9A1-203ENST00000360859 NNTQ13423 1086 aa18■□□□□ 0.47
COL9A1-203ENST00000360859 CCDC157Q569K6 752 aa18■□□□□ 0.47
COL9A1-203ENST00000360859 DCAF6Q58WW2 860 aa18■□□□□ 0.47
COL9A1-203ENST00000360859 PITRM1Q5JRX3 1037 aa18■□□□□ 0.47
COL9A1-203ENST00000360859 RRAGAQ7L523 313 aa18■□□□□ 0.47
COL9A1-203ENST00000360859 MMAAQ8IVH4 418 aaKnown RBP18■□□□□ 0.47
COL9A1-203ENST00000360859 SCUBE3Q8IX30 993 aa18■□□□□ 0.47
COL9A1-203ENST00000360859 ENGASEQ8NFI3 743 aa18■□□□□ 0.47
COL9A1-203ENST00000360859 ADAM32Q8TC27 787 aa18■□□□□ 0.47
COL9A1-203ENST00000360859 HNRNPLLQ8WVV9 542 aaKnown RBP18■□□□□ 0.47
COL9A1-203ENST00000360859 SLC39A13Q96H72 371 aa18■□□□□ 0.47
COL9A1-203ENST00000360859 SLC6A18Q96N87 628 aa18■□□□□ 0.47
COL9A1-203ENST00000360859 SERPINB11Q96P15 392 aa18■□□□□ 0.47
COL9A1-203ENST00000360859 NEUROG2Q9H2A3 272 aa18■□□□□ 0.47
COL9A1-203ENST00000360859 EBF2Q9HAK2 575 aa18■□□□□ 0.47
COL9A1-203ENST00000360859 A0A1B0GTQ1 180 aa17.99■□□□□ 0.47
COL9A1-203ENST00000360859 TRABD2BA6NFA1 517 aa17.99■□□□□ 0.47
COL9A1-203ENST00000360859 TTC34A8MYJ7 566 aa17.99■□□□□ 0.47
COL9A1-203ENST00000360859 PSMA7O14818 248 aa17.99■□□□□ 0.47
COL9A1-203ENST00000360859 RNASEH2AO75792 299 aaKnown RBP17.99■□□□□ 0.47
COL9A1-203ENST00000360859 LUC7L3O95232 432 aaKnown RBP17.99■□□□□ 0.47
COL9A1-203ENST00000360859 MOCS2O96007 188 aaPredicted RBP17.99■□□□□ 0.47
COL9A1-203ENST00000360859 SLC8A1P32418 973 aa17.99■□□□□ 0.47
COL9A1-203ENST00000360859 RPL34P49207 117 aaKnown RBP17.99■□□□□ 0.47
COL9A1-203ENST00000360859 CYP4F3Q08477 520 aa17.99■□□□□ 0.47
COL9A1-203ENST00000360859 SFSWAPQ12872 951 aaKnown RBP17.99■□□□□ 0.47
COL9A1-203ENST00000360859 CAMK2BQ13554 666 aa17.99■□□□□ 0.47
COL9A1-203ENST00000360859 KCNJ12Q14500 433 aa17.99■□□□□ 0.47
COL9A1-203ENST00000360859 SMAD1Q15797 465 aaKnown RBP17.99■□□□□ 0.47
COL9A1-203ENST00000360859 INAVAQ3KP66 663 aa17.99■□□□□ 0.47
COL9A1-203ENST00000360859 CCDC40Q4G0X9 1142 aa17.99■□□□□ 0.47
COL9A1-203ENST00000360859 TAC4Q86UU9 113 aa17.99■□□□□ 0.47
COL9A1-203ENST00000360859 ARHGEF19Q8IW93 802 aa17.99■□□□□ 0.47
COL9A1-203ENST00000360859 CCDC117Q8IWD4 279 aaPredicted RBP17.99■□□□□ 0.47
COL9A1-203ENST00000360859 FAM149B1Q96BN6 582 aa17.99■□□□□ 0.47
COL9A1-203ENST00000360859 DHTKD1Q96HY7 919 aaPredicted RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms