RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 TUBB4AP04350 444 aa12.8□□□□□ -0.36
NIF3L1-201ENST00000359683 ATP1A1P05023 1023 aaKnown RBP12.8□□□□□ -0.36
NIF3L1-201ENST00000359683 CD48P09326 243 aa12.8□□□□□ -0.36
NIF3L1-201ENST00000359683 HOXC13P31276 330 aa12.8□□□□□ -0.36
NIF3L1-201ENST00000359683 DPYSL3Q14195 570 aa12.8□□□□□ -0.36
NIF3L1-201ENST00000359683 GRM2Q14416 872 aa12.8□□□□□ -0.36
NIF3L1-201ENST00000359683 KRT81Q14533 505 aa12.8□□□□□ -0.36
NIF3L1-201ENST00000359683 MPPE1Q53F39 396 aa12.8□□□□□ -0.36
NIF3L1-201ENST00000359683 PPP6R3Q5H9R7 873 aaPredicted RBP12.8□□□□□ -0.36
NIF3L1-201ENST00000359683 MPP7Q5T2T1 576 aa12.8□□□□□ -0.36
NIF3L1-201ENST00000359683 ZFYVE27Q5T4F4 411 aa12.8□□□□□ -0.36
NIF3L1-201ENST00000359683 RHBDF2Q6PJF5 856 aa12.8□□□□□ -0.36
NIF3L1-201ENST00000359683 MFSD7Q6UXD7 560 aa12.8□□□□□ -0.36
NIF3L1-201ENST00000359683 TMEM25Q86YD3 366 aa12.8□□□□□ -0.36
NIF3L1-201ENST00000359683 RNF25Q96BH1 459 aaPredicted RBP12.8□□□□□ -0.36
NIF3L1-201ENST00000359683 FAF2Q96CS3 445 aa12.8□□□□□ -0.36
NIF3L1-201ENST00000359683 P2RY11Q96G91 374 aa12.8□□□□□ -0.36
NIF3L1-201ENST00000359683 ZFYVE19Q96K21 471 aa12.8□□□□□ -0.36
NIF3L1-201ENST00000359683 PRICKLE1Q96MT3 831 aaPredicted RBP12.8□□□□□ -0.36
NIF3L1-201ENST00000359683 RETREG1Q9H6L5 497 aa12.8□□□□□ -0.36
NIF3L1-201ENST00000359683 SPHK2Q9NRA0 654 aa12.8□□□□□ -0.36
NIF3L1-201ENST00000359683 MARK1Q9P0L2 795 aa12.8□□□□□ -0.36
NIF3L1-201ENST00000359683 NEU3Q9UQ49 428 aa12.8□□□□□ -0.36
NIF3L1-201ENST00000359683 H3BRJ5 948 aa12.79□□□□□ -0.36
NIF3L1-201ENST00000359683 ARNTLO00327 626 aa12.79□□□□□ -0.36
NIF3L1-201ENST00000359683 EEF2KO00418 725 aaKnown RBP12.79□□□□□ -0.36
NIF3L1-201ENST00000359683 FANCGO15287 622 aa12.79□□□□□ -0.36
NIF3L1-201ENST00000359683 TSPAN3O60637 253 aa12.79□□□□□ -0.36
NIF3L1-201ENST00000359683 PYGMP11217 842 aa12.79□□□□□ -0.36
NIF3L1-201ENST00000359683 ARSAP15289 507 aa12.79□□□□□ -0.36
NIF3L1-201ENST00000359683 GOT1P17174 413 aa12.79□□□□□ -0.36
NIF3L1-201ENST00000359683 GDI1P31150 447 aa12.79□□□□□ -0.36
NIF3L1-201ENST00000359683 ARL4AP40617 200 aa12.79□□□□□ -0.36
NIF3L1-201ENST00000359683 CDKN2BP42772 138 aa12.79□□□□□ -0.36
NIF3L1-201ENST00000359683 SGSHP51688 502 aa12.79□□□□□ -0.36
NIF3L1-201ENST00000359683 COPS2P61201 443 aa12.79□□□□□ -0.36
NIF3L1-201ENST00000359683 RPS24P62847 133 aaKnown RBP12.79□□□□□ -0.36
NIF3L1-201ENST00000359683 MMRN1Q13201 1228 aa12.79□□□□□ -0.36
NIF3L1-201ENST00000359683 DHCR24Q15392 516 aa12.79□□□□□ -0.36
NIF3L1-201ENST00000359683 RABGAP1LQ5R372 815 aa12.79□□□□□ -0.36
NIF3L1-201ENST00000359683 LY6G5CQ5SRR4 150 aa12.79□□□□□ -0.36
NIF3L1-201ENST00000359683 DCAF12L1Q5VU92 463 aa12.79□□□□□ -0.36
NIF3L1-201ENST00000359683 RNF43Q68DV7 783 aa12.79□□□□□ -0.36
NIF3L1-201ENST00000359683 TRIM68Q6AZZ1 485 aa12.79□□□□□ -0.36
NIF3L1-201ENST00000359683 ANKS1BQ7Z6G8 1248 aa12.79□□□□□ -0.36
NIF3L1-201ENST00000359683 ATP2A3Q93084 1043 aa12.79□□□□□ -0.36
NIF3L1-201ENST00000359683 TBC1D31Q96DN5 1066 aa12.79□□□□□ -0.36
NIF3L1-201ENST00000359683 RBM41Q96IZ5 413 aaKnown RBP12.79□□□□□ -0.36
NIF3L1-201ENST00000359683 C16orf45Q96MC5 204 aaPredicted RBP12.79□□□□□ -0.36
NIF3L1-201ENST00000359683 RPRD1AQ96P16 312 aaPredicted RBP12.79□□□□□ -0.36
NIF3L1-201ENST00000359683 CSPG4P5Q96PW8 444 aa12.79□□□□□ -0.36
NIF3L1-201ENST00000359683 ZNF670Q9BS34 389 aa12.79□□□□□ -0.36
NIF3L1-201ENST00000359683 CALN1Q9BXU9 219 aa12.79□□□□□ -0.36
NIF3L1-201ENST00000359683 CARD9Q9H257 536 aa12.79□□□□□ -0.36
NIF3L1-201ENST00000359683 HPS4Q9NQG7 708 aa12.79□□□□□ -0.36
NIF3L1-201ENST00000359683 ARIH1Q9Y4X5 557 aaPredicted RBP12.79□□□□□ -0.36
NIF3L1-201ENST00000359683 WASH4PA8MWX3 477 aa12.78□□□□□ -0.36
NIF3L1-201ENST00000359683 NFATC1O95644 943 aa12.78□□□□□ -0.36
NIF3L1-201ENST00000359683 PENKP01210 267 aaPredicted RBP12.78□□□□□ -0.36
NIF3L1-201ENST00000359683 PRLRP16471 622 aa12.78□□□□□ -0.36
NIF3L1-201ENST00000359683 RHOQP17081 205 aa12.78□□□□□ -0.36
NIF3L1-201ENST00000359683 EPHB2P29323 1055 aa12.78□□□□□ -0.36
NIF3L1-201ENST00000359683 DNA2P51530 1060 aa12.78□□□□□ -0.36
NIF3L1-201ENST00000359683 IRAK1P51617 712 aa12.78□□□□□ -0.36
NIF3L1-201ENST00000359683 VCPP55072 806 aaKnown RBP12.78□□□□□ -0.36
NIF3L1-201ENST00000359683 TPI1P60174 286 aa12.78□□□□□ -0.36
NIF3L1-201ENST00000359683 RUNX3Q13761 415 aa12.78□□□□□ -0.36
NIF3L1-201ENST00000359683 DPYSQ14117 519 aa12.78□□□□□ -0.36
NIF3L1-201ENST00000359683 PPP2R5EQ16537 467 aa12.78□□□□□ -0.36
NIF3L1-201ENST00000359683 ODF2Q5BJF6 829 aa12.78□□□□□ -0.36
NIF3L1-201ENST00000359683 ANKRD20A8PQ5CZ79 823 aa12.78□□□□□ -0.36
NIF3L1-201ENST00000359683 TTC39BQ5VTQ0 682 aaPredicted RBP12.78□□□□□ -0.36
NIF3L1-201ENST00000359683 FYB2Q5VWT5 728 aa12.78□□□□□ -0.36
NIF3L1-201ENST00000359683 PAPD7Q5XG87 772 aaKnown RBP12.78□□□□□ -0.36
NIF3L1-201ENST00000359683 SYT10Q6XYQ8 523 aa12.78□□□□□ -0.36
NIF3L1-201ENST00000359683 SPOCD1Q6ZMY3 1216 aa12.78□□□□□ -0.36
NIF3L1-201ENST00000359683 TPGS1Q6ZTW0 290 aa12.78□□□□□ -0.36
NIF3L1-201ENST00000359683 RFX8Q6ZV50 586 aa12.78□□□□□ -0.36
NIF3L1-201ENST00000359683 CFAP52Q8N1V2 620 aa12.78□□□□□ -0.36
NIF3L1-201ENST00000359683 HJURPQ8NCD3 748 aaPredicted RBP12.78□□□□□ -0.36
NIF3L1-201ENST00000359683 RNF157Q96PX1 679 aa12.78□□□□□ -0.36
NIF3L1-201ENST00000359683 NAPGQ99747 312 aaPredicted RBP12.78□□□□□ -0.36
NIF3L1-201ENST00000359683 ZYG11BQ9C0D3 744 aa12.78□□□□□ -0.36
NIF3L1-201ENST00000359683 EBF3Q9H4W6 596 aa12.78□□□□□ -0.36
NIF3L1-201ENST00000359683 BRD9Q9H8M2 597 aa12.78□□□□□ -0.36
NIF3L1-201ENST00000359683 ECT2Q9H8V3 914 aa12.78□□□□□ -0.36
NIF3L1-201ENST00000359683 TRPV5Q9NQA5 729 aa12.78□□□□□ -0.36
NIF3L1-201ENST00000359683 MPP6Q9NZW5 540 aa12.78□□□□□ -0.36
NIF3L1-201ENST00000359683 STIM2Q9P246 746 aa12.78□□□□□ -0.36
NIF3L1-201ENST00000359683 ZNF212Q9UDV6 495 aa12.78□□□□□ -0.36
NIF3L1-201ENST00000359683 DNAI1Q9UI46 699 aa12.78□□□□□ -0.36
NIF3L1-201ENST00000359683 MYOFQ9NZM1 2061 aa12.78□□□□□ -0.36
NIF3L1-201ENST00000359683 MUC6Q6W4X9 2439 aa12.78□□□□□ -0.36
NIF3L1-201ENST00000359683 DOCK4Q8N1I0 1966 aa12.78□□□□□ -0.36
NIF3L1-201ENST00000359683 ZNF318Q5VUA4 2279 aa12.77□□□□□ -0.36
NIF3L1-201ENST00000359683 CTAGE9A4FU28 777 aa12.77□□□□□ -0.36
NIF3L1-201ENST00000359683 OTOL1A6NHN0 477 aaPredicted RBP12.77□□□□□ -0.36
NIF3L1-201ENST00000359683 ESPNB1AK53 854 aa12.77□□□□□ -0.36
NIF3L1-201ENST00000359683 KIF2AO00139 706 aaPredicted RBP12.77□□□□□ -0.36
NIF3L1-201ENST00000359683 KCNK3O14649 394 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms