RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 UAP1Q16222 522 aaPredicted RBP13.9□□□□□ -0.18
CCDC197-201ENST00000359253 TAF12Q16514 161 aa13.9□□□□□ -0.18
CCDC197-201ENST00000359253 PABPC1LQ4VXU2 614 aaKnown RBP13.9□□□□□ -0.18
CCDC197-201ENST00000359253 MANEALQ5VSG8 457 aa13.9□□□□□ -0.18
CCDC197-201ENST00000359253 LRRC31Q6UY01 552 aa13.9□□□□□ -0.18
CCDC197-201ENST00000359253 NAT8LQ8N9F0 302 aa13.9□□□□□ -0.18
CCDC197-201ENST00000359253 GLIS1Q8NBF1 620 aa13.9□□□□□ -0.18
CCDC197-201ENST00000359253 POF1BQ8WVV4 589 aa13.9□□□□□ -0.18
CCDC197-201ENST00000359253 HTR3CQ8WXA8 447 aa13.9□□□□□ -0.18
CCDC197-201ENST00000359253 HDAC11Q96DB2 347 aa13.9□□□□□ -0.18
CCDC197-201ENST00000359253 FCRL2Q96LA5 508 aaPredicted RBP13.9□□□□□ -0.18
CCDC197-201ENST00000359253 MARCH2Q9P0N8 246 aa13.9□□□□□ -0.18
CCDC197-201ENST00000359253 SFMBT1Q9UHJ3 866 aa13.9□□□□□ -0.18
CCDC197-201ENST00000359253 DNMT3LQ9UJW3 386 aa13.9□□□□□ -0.18
CCDC197-201ENST00000359253 PLAAQ9Y263 795 aa13.9□□□□□ -0.18
CCDC197-201ENST00000359253 IRAK3Q9Y616 596 aa13.9□□□□□ -0.18
CCDC197-201ENST00000359253 MYO9BQ13459 2157 aa13.9□□□□□ -0.18
CCDC197-201ENST00000359253 I6L893 689 aaPredicted RBP13.89□□□□□ -0.19
CCDC197-201ENST00000359253 RFXAPO00287 272 aa13.89□□□□□ -0.19
CCDC197-201ENST00000359253 GRM6O15303 877 aa13.89□□□□□ -0.19
CCDC197-201ENST00000359253 RIPK2O43353 540 aa13.89□□□□□ -0.19
CCDC197-201ENST00000359253 TLR5O60602 858 aa13.89□□□□□ -0.19
CCDC197-201ENST00000359253 TTC4O95801 387 aa13.89□□□□□ -0.19
CCDC197-201ENST00000359253 ABHD2P08910 425 aa13.89□□□□□ -0.19
CCDC197-201ENST00000359253 ZSCAN5DPP0CG00 497 aa13.89□□□□□ -0.19
CCDC197-201ENST00000359253 ETS1P14921 441 aa13.89□□□□□ -0.19
CCDC197-201ENST00000359253 FOSL2P15408 326 aa13.89□□□□□ -0.19
CCDC197-201ENST00000359253 IGFBP4P22692 258 aa13.89□□□□□ -0.19
CCDC197-201ENST00000359253 ARL4CP56559 192 aa13.89□□□□□ -0.19
CCDC197-201ENST00000359253 FAM193AP78312 1265 aa13.89□□□□□ -0.19
CCDC197-201ENST00000359253 SARNPP82979 210 aaKnown RBP13.89□□□□□ -0.19
CCDC197-201ENST00000359253 PPIDQ08752 370 aaKnown RBP13.89□□□□□ -0.19
CCDC197-201ENST00000359253 IFFO1Q0D2I5 559 aa13.89□□□□□ -0.19
CCDC197-201ENST00000359253 GALNT2Q10471 571 aa13.89□□□□□ -0.19
CCDC197-201ENST00000359253 EFEMP1Q12805 493 aa13.89□□□□□ -0.19
CCDC197-201ENST00000359253 C10orf120Q5SQS8 335 aa13.89□□□□□ -0.19
CCDC197-201ENST00000359253 HECTD3Q5T447 861 aa13.89□□□□□ -0.19
CCDC197-201ENST00000359253 CCDC149Q6ZUS6 474 aa13.89□□□□□ -0.19
CCDC197-201ENST00000359253 SPRED2Q7Z698 418 aa13.89□□□□□ -0.19
CCDC197-201ENST00000359253 PDIK1LQ8N165 341 aa13.89□□□□□ -0.19
CCDC197-201ENST00000359253 MCUQ8NE86 351 aa13.89□□□□□ -0.19
CCDC197-201ENST00000359253 GIPC2Q8TF65 315 aa13.89□□□□□ -0.19
CCDC197-201ENST00000359253 MYLIPQ8WY64 445 aa13.89□□□□□ -0.19
CCDC197-201ENST00000359253 CPT1BQ92523 772 aa13.89□□□□□ -0.19
CCDC197-201ENST00000359253 PRCCQ92733 491 aaPredicted RBP13.89□□□□□ -0.19
CCDC197-201ENST00000359253 PPP2R3CQ969Q6 453 aa13.89□□□□□ -0.19
CCDC197-201ENST00000359253 EXOC4Q96A65 974 aa13.89□□□□□ -0.19
CCDC197-201ENST00000359253 RBM15Q96T37 977 aaKnown RBP eCLIP13.89□□□□□ -0.19
CCDC197-201ENST00000359253 CCDC77Q9BR77 488 aa13.89□□□□□ -0.19
CCDC197-201ENST00000359253 EMILIN2Q9BXX0 1053 aa13.89□□□□□ -0.19
CCDC197-201ENST00000359253 PPCSQ9HAB8 311 aa13.89□□□□□ -0.19
CCDC197-201ENST00000359253 ALG13Q9NP73 1137 aaKnown RBP13.89□□□□□ -0.19
CCDC197-201ENST00000359253 ANLNQ9NQW6 1124 aa13.89□□□□□ -0.19
CCDC197-201ENST00000359253 TLR9Q9NR96 1032 aa13.89□□□□□ -0.19
CCDC197-201ENST00000359253 ETNK2Q9NVF9 386 aa13.89□□□□□ -0.19
CCDC197-201ENST00000359253 TRHDEQ9UKU6 1024 aa13.89□□□□□ -0.19
CCDC197-201ENST00000359253 YIPF1Q9Y548 306 aa13.89□□□□□ -0.19
CCDC197-201ENST00000359253 NFS1Q9Y697 457 aa13.89□□□□□ -0.19
CCDC197-201ENST00000359253 MYO16Q9Y6X6 1858 aa13.89□□□□□ -0.19
CCDC197-201ENST00000359253 A0A0A0MRY4 1105 aa13.88□□□□□ -0.19
CCDC197-201ENST00000359253 SPDYE4A6NLX3 237 aa13.88□□□□□ -0.19
CCDC197-201ENST00000359253 FAM72CH0Y354 149 aa13.88□□□□□ -0.19
CCDC197-201ENST00000359253 PRRG1O14668 218 aa13.88□□□□□ -0.19
CCDC197-201ENST00000359253 ALOX15BO15296 676 aa13.88□□□□□ -0.19
CCDC197-201ENST00000359253 MFSD11O43934 449 aa13.88□□□□□ -0.19
CCDC197-201ENST00000359253 SOAT2O75908 522 aa13.88□□□□□ -0.19
CCDC197-201ENST00000359253 SEC24AO95486 1093 aa13.88□□□□□ -0.19
CCDC197-201ENST00000359253 ADH1AP07327 375 aa13.88□□□□□ -0.19
CCDC197-201ENST00000359253 MYZAPP0CAP1 466 aa13.88□□□□□ -0.19
CCDC197-201ENST00000359253 HMGA1P17096 107 aaKnown RBP13.88□□□□□ -0.19
CCDC197-201ENST00000359253 PFKLP17858 780 aa13.88□□□□□ -0.19
CCDC197-201ENST00000359253 RPL17P18621 184 aaKnown RBP13.88□□□□□ -0.19
CCDC197-201ENST00000359253 TPSB2P20231 275 aa13.88□□□□□ -0.19
CCDC197-201ENST00000359253 OAS2P29728 719 aaKnown RBP13.88□□□□□ -0.19
CCDC197-201ENST00000359253 CAMK1Q14012 370 aa13.88□□□□□ -0.19
CCDC197-201ENST00000359253 TPSAB1Q15661 275 aa13.88□□□□□ -0.19
CCDC197-201ENST00000359253 HIF1AQ16665 826 aa13.88□□□□□ -0.19
CCDC197-201ENST00000359253 C6orf118Q5T5N4 469 aa13.88□□□□□ -0.19
CCDC197-201ENST00000359253 FAM72AQ5TYM5 149 aa13.88□□□□□ -0.19
CCDC197-201ENST00000359253 FAM72DQ6L9T8 149 aa13.88□□□□□ -0.19
CCDC197-201ENST00000359253 ARHGEF18Q6ZSZ5 1173 aa13.88□□□□□ -0.19
CCDC197-201ENST00000359253 CCDC25Q86WR0 208 aa13.88□□□□□ -0.19
CCDC197-201ENST00000359253 FAM72BQ86X60 149 aa13.88□□□□□ -0.19
CCDC197-201ENST00000359253 CNPY4Q8N129 248 aa13.88□□□□□ -0.19
CCDC197-201ENST00000359253 FATE1Q969F0 183 aa13.88□□□□□ -0.19
CCDC197-201ENST00000359253 PSMG2Q969U7 264 aa13.88□□□□□ -0.19
CCDC197-201ENST00000359253 PLD4Q96BZ4 506 aa13.88□□□□□ -0.19
CCDC197-201ENST00000359253 ZNF512Q96ME7 567 aaPredicted RBP13.88□□□□□ -0.19
CCDC197-201ENST00000359253 SPATA13Q96N96 652 aa13.88□□□□□ -0.19
CCDC197-201ENST00000359253 TSGA13Q96PP4 275 aa13.88□□□□□ -0.19
CCDC197-201ENST00000359253 PPP1R2P1Q96PQ5 205 aa13.88□□□□□ -0.19
CCDC197-201ENST00000359253 MAGEB5Q9BZ81 275 aa13.88□□□□□ -0.19
CCDC197-201ENST00000359253 CDC42EP4Q9H3Q1 356 aaKnown RBP13.88□□□□□ -0.19
CCDC197-201ENST00000359253 SEMA4AQ9H3S1 761 aa13.88□□□□□ -0.19
CCDC197-201ENST00000359253 TMPRSS4Q9NRS4 437 aa13.88□□□□□ -0.19
CCDC197-201ENST00000359253 MAGED2Q9UNF1 606 aaPredicted RBP13.88□□□□□ -0.19
CCDC197-201ENST00000359253 IGLV3-10A0A075B6K4 115 aa13.87□□□□□ -0.19
CCDC197-201ENST00000359253 SLC12A8A0AV02 714 aa13.87□□□□□ -0.19
CCDC197-201ENST00000359253 ZNF840PA6NDX5 716 aa13.87□□□□□ -0.19
CCDC197-201ENST00000359253 A6NNZ2 444 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms