RNA–Protein interactions for RNA: ENST00000358971.7

SEPSECS-201, Transcript of Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase, humanhuman

TSL 1 (best)

Gene SEPSECS, Length 3,344 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEPSECS-201ENST00000358971 ELK3P41970 407 aa11.68□□□□□ -0.54
SEPSECS-201ENST00000358971 ADCY7P51828 1080 aa11.68□□□□□ -0.54
SEPSECS-201ENST00000358971 RACK1P63244 317 aaKnown RBP11.68□□□□□ -0.54
SEPSECS-201ENST00000358971 CEP55Q53EZ4 464 aa11.68□□□□□ -0.54
SEPSECS-201ENST00000358971 PIGGQ5H8A4 983 aa11.68□□□□□ -0.54
SEPSECS-201ENST00000358971 LGSNQ5TDP6 509 aa11.68□□□□□ -0.54
SEPSECS-201ENST00000358971 USP17L2Q6R6M4 530 aa11.68□□□□□ -0.54
SEPSECS-201ENST00000358971 ATG14Q6ZNE5 492 aa11.68□□□□□ -0.54
SEPSECS-201ENST00000358971 CCDC60Q8IWA6 550 aaPredicted RBP11.68□□□□□ -0.54
SEPSECS-201ENST00000358971 LSMEM2Q8N112 164 aa11.68□□□□□ -0.54
SEPSECS-201ENST00000358971 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.68□□□□□ -0.54
SEPSECS-201ENST00000358971 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.68□□□□□ -0.54
SEPSECS-201ENST00000358971 ACMSDQ8TDX5 336 aa11.68□□□□□ -0.54
SEPSECS-201ENST00000358971 ZUFSPQ96AP4 578 aa11.68□□□□□ -0.54
SEPSECS-201ENST00000358971 RMDN1Q96DB5 314 aa11.68□□□□□ -0.54
SEPSECS-201ENST00000358971 OMA1Q96E52 524 aa11.68□□□□□ -0.54
SEPSECS-201ENST00000358971 AKAP10O43572 662 aa11.67□□□□□ -0.54
SEPSECS-201ENST00000358971 ZBTB14O43829 449 aa11.67□□□□□ -0.54
SEPSECS-201ENST00000358971 NADKO95544 446 aaPredicted RBP11.67□□□□□ -0.54
SEPSECS-201ENST00000358971 CLIC3O95833 236 aa11.67□□□□□ -0.54
SEPSECS-201ENST00000358971 TOP3BO95985 862 aaKnown RBP11.67□□□□□ -0.54
SEPSECS-201ENST00000358971 MYL4P12829 197 aa11.67□□□□□ -0.54
SEPSECS-201ENST00000358971 CES1P23141 567 aa11.67□□□□□ -0.54
SEPSECS-201ENST00000358971 NFX1Q12986 1120 aaKnown RBP11.67□□□□□ -0.54
SEPSECS-201ENST00000358971 VPS72Q15906 364 aa11.67□□□□□ -0.54
SEPSECS-201ENST00000358971 OTOP3Q7RTS5 596 aa11.67□□□□□ -0.54
SEPSECS-201ENST00000358971 PCGF5Q86SE9 256 aa11.67□□□□□ -0.54
SEPSECS-201ENST00000358971 SLC26A11Q86WA9 606 aa11.67□□□□□ -0.54
SEPSECS-201ENST00000358971 CCDC28AQ8IWP9 274 aa11.67□□□□□ -0.54
SEPSECS-201ENST00000358971 GLT1D1Q96MS3 346 aa11.67□□□□□ -0.54
SEPSECS-201ENST00000358971 ZNF717Q9BY31 904 aaPredicted RBP11.67□□□□□ -0.54
SEPSECS-201ENST00000358971 WARS2Q9UGM6 360 aaKnown RBP11.67□□□□□ -0.54
SEPSECS-201ENST00000358971 ZHX2Q9Y6X8 837 aa11.67□□□□□ -0.54
SEPSECS-201ENST00000358971 KBTBD13C9JR72 458 aa11.67□□□□□ -0.54
SEPSECS-201ENST00000358971 HAT1O14929 419 aa11.67□□□□□ -0.54
SEPSECS-201ENST00000358971 BCAS2O75934 225 aaPredicted RBP11.67□□□□□ -0.54
SEPSECS-201ENST00000358971 CAPNS1P04632 268 aa11.67□□□□□ -0.54
SEPSECS-201ENST00000358971 CD1EP15812 388 aa11.67□□□□□ -0.54
SEPSECS-201ENST00000358971 YAP1P46937 504 aaKnown RBP11.67□□□□□ -0.54
SEPSECS-201ENST00000358971 GCLMP48507 274 aa11.67□□□□□ -0.54
SEPSECS-201ENST00000358971 ART3Q13508 389 aa11.67□□□□□ -0.54
SEPSECS-201ENST00000358971 TUBA3CQ13748 450 aa11.67□□□□□ -0.54
SEPSECS-201ENST00000358971 ATP13A4Q4VNC1 1196 aa11.67□□□□□ -0.54
SEPSECS-201ENST00000358971 ACAD10Q6JQN1 1059 aa11.67□□□□□ -0.54
SEPSECS-201ENST00000358971 ZCCHC8Q6NZY4 707 aaKnown RBP11.67□□□□□ -0.54
SEPSECS-201ENST00000358971 MAVSQ7Z434 540 aa11.67□□□□□ -0.54
SEPSECS-201ENST00000358971 CYGBQ8WWM9 190 aa11.67□□□□□ -0.54
SEPSECS-201ENST00000358971 TFAP2CQ92754 450 aa11.67□□□□□ -0.54
SEPSECS-201ENST00000358971 CFAP36Q96G28 342 aa11.67□□□□□ -0.54
SEPSECS-201ENST00000358971 TXNDC15Q96J42 360 aa11.67□□□□□ -0.54
SEPSECS-201ENST00000358971 C8orf48Q96LL4 319 aa11.67□□□□□ -0.54
SEPSECS-201ENST00000358971 IL12RB2Q99665 862 aa11.67□□□□□ -0.54
SEPSECS-201ENST00000358971 AS3MTQ9HBK9 375 aa11.67□□□□□ -0.54
SEPSECS-201ENST00000358971 DCP1AQ9NPI6 582 aaPredicted RBP11.67□□□□□ -0.54
SEPSECS-201ENST00000358971 C20orf96Q9NUD7 363 aaPredicted RBP11.67□□□□□ -0.54
SEPSECS-201ENST00000358971 THG1LQ9NWX6 298 aaKnown RBP11.67□□□□□ -0.54
SEPSECS-201ENST00000358971 MCM9Q9NXL9 1143 aa11.67□□□□□ -0.54
SEPSECS-201ENST00000358971 KCNN3Q9UGI6 736 aa11.67□□□□□ -0.54
SEPSECS-201ENST00000358971 DYRK3O43781 588 aa11.66□□□□□ -0.54
SEPSECS-201ENST00000358971 EDIL3O43854 480 aa11.66□□□□□ -0.54
SEPSECS-201ENST00000358971 QARSP47897 775 aaKnown RBP11.66□□□□□ -0.54
SEPSECS-201ENST00000358971 TMBIM6P55061 237 aa11.66□□□□□ -0.54
SEPSECS-201ENST00000358971 CTAG1AP78358 180 aa11.66□□□□□ -0.54
SEPSECS-201ENST00000358971 PRKCQQ04759 706 aa11.66□□□□□ -0.54
SEPSECS-201ENST00000358971 SLC13A2Q13183 592 aa11.66□□□□□ -0.54
SEPSECS-201ENST00000358971 EPC2Q52LR7 807 aa11.66□□□□□ -0.54
SEPSECS-201ENST00000358971 BOLA3Q53S33 107 aa11.66□□□□□ -0.54
SEPSECS-201ENST00000358971 NHSL2Q5HYW2 709 aa11.66□□□□□ -0.54
SEPSECS-201ENST00000358971 HYIQ5T013 277 aa11.66□□□□□ -0.54
SEPSECS-201ENST00000358971 ARCQ7LC44 396 aa11.66□□□□□ -0.54
SEPSECS-201ENST00000358971 SLC51BQ86UW2 128 aa11.66□□□□□ -0.54
SEPSECS-201ENST00000358971 ARMC8Q8IUR7 673 aa11.66□□□□□ -0.54
SEPSECS-201ENST00000358971 IGDCC3Q8IVU1 814 aa11.66□□□□□ -0.54
SEPSECS-201ENST00000358971 GALNT6Q8NCL4 622 aa11.66□□□□□ -0.54
SEPSECS-201ENST00000358971 CPT1BQ92523 772 aa11.66□□□□□ -0.54
SEPSECS-201ENST00000358971 VPS33AQ96AX1 596 aa11.66□□□□□ -0.54
SEPSECS-201ENST00000358971 PGBD4Q96DM1 585 aa11.66□□□□□ -0.54
SEPSECS-201ENST00000358971 TMA16Q96EY4 203 aaKnown RBP11.66□□□□□ -0.54
SEPSECS-201ENST00000358971 DCAF5Q96JK2 942 aa11.66□□□□□ -0.54
SEPSECS-201ENST00000358971 YME1L1Q96TA2 773 aa11.66□□□□□ -0.54
SEPSECS-201ENST00000358971 EMILIN2Q9BXX0 1053 aa11.66□□□□□ -0.54
SEPSECS-201ENST00000358971 ATP13A3Q9H7F0 1226 aa11.66□□□□□ -0.54
SEPSECS-201ENST00000358971 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.66□□□□□ -0.54
SEPSECS-201ENST00000358971 PCDH9Q9HC56 1237 aa11.66□□□□□ -0.54
SEPSECS-201ENST00000358971 ADA2Q9NZK5 511 aa11.66□□□□□ -0.54
SEPSECS-201ENST00000358971 XPO7Q9UIA9 1087 aaKnown RBP11.66□□□□□ -0.54
SEPSECS-201ENST00000358971 SNCAIPQ9Y6H5 919 aa11.66□□□□□ -0.54
SEPSECS-201ENST00000358971 SAC3D1A6NKF1 404 aa11.66□□□□□ -0.54
SEPSECS-201ENST00000358971 TSPAN1O60635 241 aa11.66□□□□□ -0.54
SEPSECS-201ENST00000358971 CCNKO75909 580 aa11.66□□□□□ -0.54
SEPSECS-201ENST00000358971 DLGAP3O95886 979 aa11.66□□□□□ -0.54
SEPSECS-201ENST00000358971 TMEM191BP0C7N4 346 aa11.66□□□□□ -0.54
SEPSECS-201ENST00000358971 PRKACAP17612 351 aa11.66□□□□□ -0.54
SEPSECS-201ENST00000358971 IL4RP24394 825 aa11.66□□□□□ -0.54
SEPSECS-201ENST00000358971 PTGS2P35354 604 aa11.66□□□□□ -0.54
SEPSECS-201ENST00000358971 TEDDM1Q5T9Z0 273 aa11.66□□□□□ -0.54
SEPSECS-201ENST00000358971 HERC6Q8IVU3 1022 aa11.66□□□□□ -0.54
SEPSECS-201ENST00000358971 MYCT1Q8N699 235 aa11.66□□□□□ -0.54
SEPSECS-201ENST00000358971 ANGPTL6Q8NI99 470 aa11.66□□□□□ -0.54
SEPSECS-201ENST00000358971 PMEPA1Q969W9 287 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms