RNA–Protein interactions for RNA: ENST00000358808.6

CLIP1-202, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLIP1, Length 5,880 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-202ENST00000358808 STX11O75558 287 aa10.39□□□□□ -0.75
CLIP1-202ENST00000358808 RPL4P36578 427 aaKnown RBP10.39□□□□□ -0.75
CLIP1-202ENST00000358808 GSTM5P46439 218 aa10.39□□□□□ -0.75
CLIP1-202ENST00000358808 BNC1Q01954 994 aa10.39□□□□□ -0.75
CLIP1-202ENST00000358808 ELAVL2Q12926 359 aaKnown RBP10.39□□□□□ -0.75
CLIP1-202ENST00000358808 USP41Q3LFD5 358 aa10.39□□□□□ -0.75
CLIP1-202ENST00000358808 RIPOR1Q6ZS17 1223 aa10.39□□□□□ -0.75
CLIP1-202ENST00000358808 C16orf59Q7L2K0 433 aa10.39□□□□□ -0.75
CLIP1-202ENST00000358808 CD302Q8IX05 232 aa10.39□□□□□ -0.75
CLIP1-202ENST00000358808 OR52L1Q8NGH7 329 aa10.39□□□□□ -0.75
CLIP1-202ENST00000358808 KCNB2Q92953 911 aa10.39□□□□□ -0.75
CLIP1-202ENST00000358808 CXorf40BQ96DE9 158 aa10.39□□□□□ -0.75
CLIP1-202ENST00000358808 TMEM237Q96Q45 408 aa10.39□□□□□ -0.75
CLIP1-202ENST00000358808 TMEM120AQ9BXJ8 343 aa10.39□□□□□ -0.75
CLIP1-202ENST00000358808 ATP13A1Q9HD20 1204 aa10.39□□□□□ -0.75
CLIP1-202ENST00000358808 CPA4Q9UI42 421 aa10.39□□□□□ -0.75
CLIP1-202ENST00000358808 PHF11Q9UIL8 331 aa10.39□□□□□ -0.75
CLIP1-202ENST00000358808 SNX12Q9UMY4 172 aa10.39□□□□□ -0.75
CLIP1-202ENST00000358808 PCDHB5Q9Y5E4 795 aa10.39□□□□□ -0.75
CLIP1-202ENST00000358808 POMCP01189 267 aa10.39□□□□□ -0.75
CLIP1-202ENST00000358808 MYBL2P10244 700 aa10.39□□□□□ -0.75
CLIP1-202ENST00000358808 FCGR1AP12314 374 aa10.39□□□□□ -0.75
CLIP1-202ENST00000358808 VHLP40337 213 aa10.39□□□□□ -0.75
CLIP1-202ENST00000358808 STAT5AP42229 794 aa10.39□□□□□ -0.75
CLIP1-202ENST00000358808 PRKAG1P54619 331 aa10.39□□□□□ -0.75
CLIP1-202ENST00000358808 SNRPFP62306 86 aaKnown RBP10.39□□□□□ -0.75
CLIP1-202ENST00000358808 ERO1BQ86YB8 467 aa10.39□□□□□ -0.75
CLIP1-202ENST00000358808 SLC22A9Q8IVM8 553 aa10.39□□□□□ -0.75
CLIP1-202ENST00000358808 SVOPQ8N4V2 548 aa10.39□□□□□ -0.75
CLIP1-202ENST00000358808 ROPN1BQ9BZX4 212 aaPredicted RBP10.39□□□□□ -0.75
CLIP1-202ENST00000358808 ROPN1Q9HAT0 212 aaPredicted RBP10.39□□□□□ -0.75
CLIP1-202ENST00000358808 CMTM6Q9NX76 183 aa10.39□□□□□ -0.75
CLIP1-202ENST00000358808 UBP1Q9NZI7 540 aa10.39□□□□□ -0.75
CLIP1-202ENST00000358808 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.39□□□□□ -0.75
CLIP1-202ENST00000358808 DLGAP2Q9P1A6 1054 aa10.39□□□□□ -0.75
CLIP1-202ENST00000358808 MCIDASD6RGH6 385 aa10.39□□□□□ -0.75
CLIP1-202ENST00000358808 GTPBP1O00178 669 aaKnown RBP10.39□□□□□ -0.75
CLIP1-202ENST00000358808 ANXA5P08758 320 aa10.39□□□□□ -0.75
CLIP1-202ENST00000358808 VEGFAP15692 232 aaPredicted RBP10.39□□□□□ -0.75
CLIP1-202ENST00000358808 ARF4P18085 180 aaPredicted RBP10.39□□□□□ -0.75
CLIP1-202ENST00000358808 BCAT1P54687 386 aa10.39□□□□□ -0.75
CLIP1-202ENST00000358808 OASLQ15646 514 aaKnown RBP10.39□□□□□ -0.75
CLIP1-202ENST00000358808 CBWD6Q4V339 395 aa10.39□□□□□ -0.75
CLIP1-202ENST00000358808 KLHL12Q53G59 568 aa10.39□□□□□ -0.75
CLIP1-202ENST00000358808 TBCELQ5QJ74 424 aa10.39□□□□□ -0.75
CLIP1-202ENST00000358808 NEK5Q6P3R8 708 aa10.39□□□□□ -0.75
CLIP1-202ENST00000358808 HPS6Q86YV9 775 aa10.39□□□□□ -0.75
CLIP1-202ENST00000358808 TAAR1Q96RJ0 339 aa10.39□□□□□ -0.75
CLIP1-202ENST00000358808 CCT8L2Q96SF2 557 aa10.39□□□□□ -0.75
CLIP1-202ENST00000358808 BHLHE41Q9C0J9 482 aaPredicted RBP10.39□□□□□ -0.75
CLIP1-202ENST00000358808 HMG20AQ9NP66 347 aa10.39□□□□□ -0.75
CLIP1-202ENST00000358808 NR2E3Q9Y5X4 410 aa10.39□□□□□ -0.75
CLIP1-202ENST00000358808 SIGLEC1Q9BZZ2 1709 aa10.39□□□□□ -0.75
CLIP1-202ENST00000358808 EFCAB10A6NFE3 127 aa10.38□□□□□ -0.75
CLIP1-202ENST00000358808 PDE9AO76083 593 aa10.38□□□□□ -0.75
CLIP1-202ENST00000358808 ZNF7P17097 686 aaPredicted RBP10.38□□□□□ -0.75
CLIP1-202ENST00000358808 CCZ1BP86790 482 aa10.38□□□□□ -0.75
CLIP1-202ENST00000358808 CCZ1P86791 482 aaPredicted RBP10.38□□□□□ -0.75
CLIP1-202ENST00000358808 ARSJQ5FYB0 599 aaPredicted RBP10.38□□□□□ -0.75
CLIP1-202ENST00000358808 AGBL2Q5U5Z8 902 aa10.38□□□□□ -0.75
CLIP1-202ENST00000358808 OLFML2AQ68BL7 652 aa10.38□□□□□ -0.75
CLIP1-202ENST00000358808 MAGEC3Q8TD91 643 aa10.38□□□□□ -0.75
CLIP1-202ENST00000358808 ENOPH1Q9UHY7 261 aa10.38□□□□□ -0.75
CLIP1-202ENST00000358808 CHKBQ9Y259 395 aa10.38□□□□□ -0.75
CLIP1-202ENST00000358808 SNUPNO95149 360 aaKnown RBP10.38□□□□□ -0.75
CLIP1-202ENST00000358808 VDRP11473 427 aa10.38□□□□□ -0.75
CLIP1-202ENST00000358808 KCNJ1P48048 391 aa10.38□□□□□ -0.75
CLIP1-202ENST00000358808 PDK2Q15119 407 aa10.38□□□□□ -0.75
CLIP1-202ENST00000358808 TFAP2DQ7Z6R9 452 aa10.38□□□□□ -0.75
CLIP1-202ENST00000358808 ZNF605Q86T29 641 aa10.38□□□□□ -0.75
CLIP1-202ENST00000358808 CCNJLQ8IV13 435 aa10.38□□□□□ -0.75
CLIP1-202ENST00000358808 TMEM132CQ8N3T6 1108 aa10.38□□□□□ -0.75
CLIP1-202ENST00000358808 FNDC5Q8NAU1 212 aa10.38□□□□□ -0.75
CLIP1-202ENST00000358808 FBXO36Q8NEA4 188 aa10.38□□□□□ -0.75
CLIP1-202ENST00000358808 CENPIQ92674 756 aaPredicted RBP10.38□□□□□ -0.75
CLIP1-202ENST00000358808 TINF2Q9BSI4 451 aa10.38□□□□□ -0.75
CLIP1-202ENST00000358808 TMEM138Q9NPI0 162 aa10.38□□□□□ -0.75
CLIP1-202ENST00000358808 A1CFQ9NQ94 594 aaKnown RBP10.38□□□□□ -0.75
CLIP1-202ENST00000358808 CCDC177Q9NQR7 707 aaPredicted RBP10.38□□□□□ -0.75
CLIP1-202ENST00000358808 ZNF232Q9UNY5 417 aa10.38□□□□□ -0.75
CLIP1-202ENST00000358808 IFT172Q9UG01 1749 aa10.38□□□□□ -0.75
CLIP1-202ENST00000358808 IGF2BP3O00425 579 aaKnown RBP eCLIP10.38□□□□□ -0.75
CLIP1-202ENST00000358808 TBX3O15119 743 aa10.38□□□□□ -0.75
CLIP1-202ENST00000358808 JCHAINP01591 159 aa10.38□□□□□ -0.75
CLIP1-202ENST00000358808 PDHBP11177 359 aa10.38□□□□□ -0.75
CLIP1-202ENST00000358808 COILP38432 576 aaPredicted RBP10.38□□□□□ -0.75
CLIP1-202ENST00000358808 SCRN3Q0VDG4 424 aa10.38□□□□□ -0.75
CLIP1-202ENST00000358808 GRB14Q14449 540 aa10.38□□□□□ -0.75
CLIP1-202ENST00000358808 ACAP2Q15057 778 aa10.38□□□□□ -0.75
CLIP1-202ENST00000358808 NAB2Q15742 525 aa10.38□□□□□ -0.75
CLIP1-202ENST00000358808 XRRA1Q6P2D8 792 aa10.38□□□□□ -0.75
CLIP1-202ENST00000358808 PGBD2Q6P3X8 592 aa10.38□□□□□ -0.75
CLIP1-202ENST00000358808 SGMS1Q86VZ5 419 aa10.38□□□□□ -0.75
CLIP1-202ENST00000358808 MTMR12Q9C0I1 747 aa10.38□□□□□ -0.75
CLIP1-202ENST00000358808 MAT2BQ9NZL9 334 aa10.38□□□□□ -0.75
CLIP1-202ENST00000358808 KANSL3Q9P2N6 904 aa10.38□□□□□ -0.75
CLIP1-202ENST00000358808 DAPK2Q9UIK4 370 aa10.38□□□□□ -0.75
CLIP1-202ENST00000358808 BTBD3Q9Y2F9 522 aa10.38□□□□□ -0.75
CLIP1-202ENST00000358808 KLHL41O60662 606 aa10.38□□□□□ -0.75
CLIP1-202ENST00000358808 PRG2P13727 222 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms