RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 ARHGAP10A1A4S6 786 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 E7ESA3 106 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 EEF2KO00418 725 aaKnown RBP6.73□□□□□ -1.33
CSDE1-203ENST00000358528 ACKR2O00590 384 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 TRIM13O60858 407 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 IL18RAPO95256 599 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 HOXC6P09630 235 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 GP5P40197 560 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 SCNN1BP51168 640 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 SLC12A1Q13621 1099 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 DGKDQ16760 1214 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 SLC9B1Q4ZJI4 515 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 FOXB2Q5VYV0 432 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 MAP1SQ66K74 1059 aaPredicted RBP6.73□□□□□ -1.33
CSDE1-203ENST00000358528 C16orf89Q6UX73 402 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 MYLK4Q86YV6 388 aaPredicted RBP6.73□□□□□ -1.33
CSDE1-203ENST00000358528 SLC7A14Q8TBB6 771 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 GATA6Q92908 595 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 OTUD5Q96G74 571 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 CELF6Q96J87 481 aaKnown RBP6.73□□□□□ -1.33
CSDE1-203ENST00000358528 NPAS2Q99743 824 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 APBA2Q99767 749 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 DNAI2Q9GZS0 605 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 ATXN3LQ9H3M9 355 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 TMEM134Q9H6X4 195 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 CHST12Q9NRB3 414 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 GALNT8Q9NY28 637 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 CPSF3Q9UKF6 684 aaKnown RBP6.73□□□□□ -1.33
CSDE1-203ENST00000358528 CDYLQ9Y232 598 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 C2CD4BA6NLJ0 364 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 MSCO60682 206 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 CHRNGP07510 517 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 PSMC3P17980 439 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 TSPAN8P19075 237 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 ACAT1P24752 427 aaKnown RBP6.73□□□□□ -1.33
CSDE1-203ENST00000358528 GMPSP49915 693 aaPredicted RBP6.73□□□□□ -1.33
CSDE1-203ENST00000358528 GALK1P51570 392 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 RABGGTBP53611 331 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 SH3BGRP55822 239 aaPredicted RBP6.73□□□□□ -1.33
CSDE1-203ENST00000358528 SLC6A3Q01959 620 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 PLOD1Q02809 727 aaPredicted RBP6.73□□□□□ -1.33
CSDE1-203ENST00000358528 MPP3Q13368 585 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 PTK2BQ14289 1009 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 KIZQ2M2Z5 673 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 TEDDM1Q5T9Z0 273 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 ARCQ7LC44 396 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 PQLC1Q8N2U9 271 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 FBXW8Q8N3Y1 598 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 NIPA2Q8N8Q9 360 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 IPMKQ8NFU5 416 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 FAM81AQ8TBF8 368 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 OR52B2Q96RD2 323 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 AGAP2Q99490 1192 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 CCDC106Q9BWC9 280 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 PRDM12Q9H4Q4 367 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 MINDY3Q9H8M7 445 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 CCDC167Q9P0B6 97 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 COPG2Q9UBF2 871 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 CSADQ9Y600 493 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 SAC3D1A6NKF1 404 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 C3orf70A6NLC5 250 aaPredicted RBP6.73□□□□□ -1.33
CSDE1-203ENST00000358528 DFFAO00273 331 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 NOL3O60936 208 aaKnown RBP6.73□□□□□ -1.33
CSDE1-203ENST00000358528 HMGB2P26583 209 aaKnown RBP6.73□□□□□ -1.33
CSDE1-203ENST00000358528 FDFT1P37268 417 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 ETFBP38117 255 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 GPD2P43304 727 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 ESRRGP62508 458 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 IRF9Q00978 393 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 TNFAIP2Q03169 654 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 PCSK7Q16549 785 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 PDZD4Q76G19 769 aaPredicted RBP6.73□□□□□ -1.33
CSDE1-203ENST00000358528 DEFB106AQ8N104 65 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 CCDC185Q8N715 623 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 CERS2Q96G23 380 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 ELMO2Q96JJ3 720 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 LHX5Q9H2C1 402 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 USP29Q9HBJ7 922 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 NMRAL1Q9HBL8 299 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 FETUBQ9UGM5 382 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 CDK5RAP2Q96SN8 1893 aa6.73□□□□□ -1.33
CSDE1-203ENST00000358528 ARHGEF37A1IGU5 675 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 TK2O00142 265 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 GIPC1O14908 333 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 BIRC5O15392 142 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 CILPO75339 1184 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 MAFO75444 373 aaPredicted RBP6.72□□□□□ -1.33
CSDE1-203ENST00000358528 JCHAINP01591 159 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 FAM58BPP0C7Q3 252 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 DHRS4L1P0CG22 281 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 TSHRP16473 764 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 ITGAXP20702 1163 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 PIK3R1P27986 724 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 BAG6P46379 1132 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 TPI1P60174 286 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 EN1Q05925 392 aaPredicted RBP6.72□□□□□ -1.33
CSDE1-203ENST00000358528 POU6F1Q14863 301 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 CERCAMQ5T4B2 595 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 PAOXQ6QHF9 649 aa6.72□□□□□ -1.33
CSDE1-203ENST00000358528 DLK2Q6UY11 383 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms