RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 PNKPQ96T60 521 aa16.49■□□□□ 0.23
FDPS-201ENST00000356657 RAB6CQ9H0N0 254 aa16.49■□□□□ 0.23
FDPS-201ENST00000356657 CATSPERBQ9H7T0 1116 aa16.49■□□□□ 0.23
FDPS-201ENST00000356657 DDX56Q9NY93 547 aaKnown RBP16.49■□□□□ 0.23
FDPS-201ENST00000356657 STIM2Q9P246 746 aa16.49■□□□□ 0.23
FDPS-201ENST00000356657 ALG6Q9Y672 507 aa16.49■□□□□ 0.23
FDPS-201ENST00000356657 GOLGA6L7A0A1B0GV03 622 aa16.48■□□□□ 0.23
FDPS-201ENST00000356657 KANSL1LA0AUZ9 987 aa16.48■□□□□ 0.23
FDPS-201ENST00000356657 MACROD2A1Z1Q3 448 aa16.48■□□□□ 0.23
FDPS-201ENST00000356657 PRR33A8MZF0 331 aa16.48■□□□□ 0.23
FDPS-201ENST00000356657 NCAM2O15394 837 aa16.48■□□□□ 0.23
FDPS-201ENST00000356657 TULP3O75386 442 aa16.48■□□□□ 0.23
FDPS-201ENST00000356657 LRIG2O94898 1065 aa16.48■□□□□ 0.23
FDPS-201ENST00000356657 RHOQP17081 205 aa16.48■□□□□ 0.23
FDPS-201ENST00000356657 IL1R2P27930 398 aa16.48■□□□□ 0.23
FDPS-201ENST00000356657 ARL4AP40617 200 aa16.48■□□□□ 0.23
FDPS-201ENST00000356657 GRIA2P42262 883 aa16.48■□□□□ 0.23
FDPS-201ENST00000356657 MAPKAPK2P49137 400 aa16.48■□□□□ 0.23
FDPS-201ENST00000356657 DGKGP49619 791 aa16.48■□□□□ 0.23
FDPS-201ENST00000356657 GRSF1Q12849 480 aaKnown RBP eCLIP16.48■□□□□ 0.23
FDPS-201ENST00000356657 DMC1Q14565 340 aa16.48■□□□□ 0.23
FDPS-201ENST00000356657 EIF4HQ15056 248 aaKnown RBP16.48■□□□□ 0.23
FDPS-201ENST00000356657 TMEM196Q5HYL7 178 aa16.48■□□□□ 0.23
FDPS-201ENST00000356657 GRAMD4Q6IC98 578 aa16.48■□□□□ 0.23
FDPS-201ENST00000356657 ZNF783Q6ZMS7 281 aa16.48■□□□□ 0.23
FDPS-201ENST00000356657 MFN1Q8IWA4 741 aa16.48■□□□□ 0.23
FDPS-201ENST00000356657 SIX5Q8N196 739 aa16.48■□□□□ 0.23
FDPS-201ENST00000356657 SYNPOQ8N3V7 929 aa16.48■□□□□ 0.23
FDPS-201ENST00000356657 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.48■□□□□ 0.23
FDPS-201ENST00000356657 FAM71BQ8TC56 605 aa16.48■□□□□ 0.23
FDPS-201ENST00000356657 WFIKKN2Q8TEU8 576 aa16.48■□□□□ 0.23
FDPS-201ENST00000356657 FAM3CQ92520 227 aa16.48■□□□□ 0.23
FDPS-201ENST00000356657 LRFN3Q9BTN0 628 aa16.48■□□□□ 0.23
FDPS-201ENST00000356657 DHX35Q9H5Z1 703 aaKnown RBP16.48■□□□□ 0.23
FDPS-201ENST00000356657 PRDM16Q9HAZ2 1276 aa16.48■□□□□ 0.23
FDPS-201ENST00000356657 C11orf16Q9NQ32 467 aa16.48■□□□□ 0.23
FDPS-201ENST00000356657 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.48■□□□□ 0.23
FDPS-201ENST00000356657 DNAJC17Q9NVM6 304 aaKnown RBP16.48■□□□□ 0.23
FDPS-201ENST00000356657 SALL4Q9UJQ4 1053 aa16.48■□□□□ 0.23
FDPS-201ENST00000356657 CA14Q9ULX7 337 aa16.48■□□□□ 0.23
FDPS-201ENST00000356657 TFR2Q9UP52 801 aa16.48■□□□□ 0.23
FDPS-201ENST00000356657 DUSP10Q9Y6W6 482 aa16.48■□□□□ 0.23
FDPS-201ENST00000356657 CHD5Q8TDI0 1954 aa16.48■□□□□ 0.23
FDPS-201ENST00000356657 A0A0A0MRY4 1105 aa16.48■□□□□ 0.23
FDPS-201ENST00000356657 TMEM110-MUSTN1A8MSY1 372 aa16.48■□□□□ 0.23
FDPS-201ENST00000356657 MIF4GDA9UHW6 222 aaKnown RBP16.48■□□□□ 0.23
FDPS-201ENST00000356657 BUB1O43683 1085 aa16.48■□□□□ 0.23
FDPS-201ENST00000356657 TSPAN3O60637 253 aa16.48■□□□□ 0.23
FDPS-201ENST00000356657 RARAP10276 462 aa16.48■□□□□ 0.23
FDPS-201ENST00000356657 COMTP21964 271 aa16.48■□□□□ 0.23
FDPS-201ENST00000356657 ETFBP38117 255 aa16.48■□□□□ 0.23
FDPS-201ENST00000356657 OPRD1P41143 372 aa16.48■□□□□ 0.23
FDPS-201ENST00000356657 MAGEA9P43362 315 aa16.48■□□□□ 0.23
FDPS-201ENST00000356657 TPI1P60174 286 aa16.48■□□□□ 0.23
FDPS-201ENST00000356657 RPS24P62847 133 aaKnown RBP16.48■□□□□ 0.23
FDPS-201ENST00000356657 LRRC32Q14392 662 aa16.48■□□□□ 0.23
FDPS-201ENST00000356657 HS1BP3Q53T59 392 aa16.48■□□□□ 0.23
FDPS-201ENST00000356657 DGKKQ5KSL6 1271 aa16.48■□□□□ 0.23
FDPS-201ENST00000356657 C6orf118Q5T5N4 469 aa16.48■□□□□ 0.23
FDPS-201ENST00000356657 ANKS1BQ7Z6G8 1248 aa16.48■□□□□ 0.23
FDPS-201ENST00000356657 CCAR2Q8N163 923 aaKnown RBP16.48■□□□□ 0.23
FDPS-201ENST00000356657 LRRC57Q8N9N7 239 aa16.48■□□□□ 0.23
FDPS-201ENST00000356657 TRIM58Q8NG06 486 aa16.48■□□□□ 0.23
FDPS-201ENST00000356657 KCNV2Q8TDN2 545 aa16.48■□□□□ 0.23
FDPS-201ENST00000356657 CHFRQ96EP1 664 aa16.48■□□□□ 0.23
FDPS-201ENST00000356657 ZNF670Q9BS34 389 aa16.48■□□□□ 0.23
FDPS-201ENST00000356657 IER2Q9BTL4 223 aa16.48■□□□□ 0.23
FDPS-201ENST00000356657 GUCA1BQ9UMX6 200 aa16.48■□□□□ 0.23
FDPS-201ENST00000356657 TBC1D30Q9Y2I9 924 aa16.48■□□□□ 0.23
FDPS-201ENST00000356657 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.47■□□□□ 0.23
FDPS-201ENST00000356657 CXorf51AA0A1B0GTR3 108 aa16.47■□□□□ 0.23
FDPS-201ENST00000356657 CCDC66A2RUB6 948 aa16.47■□□□□ 0.23
FDPS-201ENST00000356657 KRBA1A5PL33 1030 aa16.47■□□□□ 0.23
FDPS-201ENST00000356657 TMEM221A6NGB7 291 aa16.47■□□□□ 0.23
FDPS-201ENST00000356657 WASH4PA8MWX3 477 aa16.47■□□□□ 0.23
FDPS-201ENST00000356657 H0Y626 953 aa16.47■□□□□ 0.23
FDPS-201ENST00000356657 H3BRJ5 948 aa16.47■□□□□ 0.23
FDPS-201ENST00000356657 M0R296 226 aa16.47■□□□□ 0.23
FDPS-201ENST00000356657 EEF2KO00418 725 aaKnown RBP16.47■□□□□ 0.23
FDPS-201ENST00000356657 NPC1O15118 1278 aa16.47■□□□□ 0.23
FDPS-201ENST00000356657 TIMM44O43615 452 aa16.47■□□□□ 0.23
FDPS-201ENST00000356657 SRGAP2O75044 1071 aa16.47■□□□□ 0.23
FDPS-201ENST00000356657 MOCS3O95396 460 aa16.47■□□□□ 0.23
FDPS-201ENST00000356657 APODP05090 189 aa16.47■□□□□ 0.23
FDPS-201ENST00000356657 MSNP26038 577 aaKnown RBP16.47■□□□□ 0.23
FDPS-201ENST00000356657 EPHB2P29323 1055 aa16.47■□□□□ 0.23
FDPS-201ENST00000356657 ZNF177Q13360 481 aaPredicted RBP16.47■□□□□ 0.23
FDPS-201ENST00000356657 ODF2Q5BJF6 829 aa16.47■□□□□ 0.23
FDPS-201ENST00000356657 AHI1Q8N157 1196 aa16.47■□□□□ 0.23
FDPS-201ENST00000356657 TERB1Q8NA31 727 aa16.47■□□□□ 0.23
FDPS-201ENST00000356657 IGSF8Q969P0 613 aa16.47■□□□□ 0.23
FDPS-201ENST00000356657 MFSD1Q9H3U5 465 aa16.47■□□□□ 0.23
FDPS-201ENST00000356657 ARHGEF4Q9NR80 690 aa16.47■□□□□ 0.23
FDPS-201ENST00000356657 TMPRSS4Q9NRS4 437 aa16.47■□□□□ 0.23
FDPS-201ENST00000356657 TMEM248Q9NWD8 314 aa16.47■□□□□ 0.23
FDPS-201ENST00000356657 PLK2Q9NYY3 685 aa16.47■□□□□ 0.23
FDPS-201ENST00000356657 KIAA1522Q9P206 1035 aaPredicted RBP16.47■□□□□ 0.23
FDPS-201ENST00000356657 GRID2IPA4D2P6 1211 aa16.46■□□□□ 0.23
FDPS-201ENST00000356657 CREB3O43889 395 aa16.46■□□□□ 0.23
FDPS-201ENST00000356657 KAT7O95251 611 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms