RNA–Protein interactions for RNA: ENST00000356135.9

CHKA-202, Transcript of choline kinase alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHKA, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-202ENST00000356135 ERCC2P18074 760 aa24.8■■□□□ 1.56
CHKA-202ENST00000356135 SGSHP51688 502 aa24.8■■□□□ 1.56
CHKA-202ENST00000356135 ADGRF1Q5T601 910 aa24.8■■□□□ 1.56
CHKA-202ENST00000356135 LGI2Q8N0V4 545 aa24.8■■□□□ 1.56
CHKA-202ENST00000356135 TRAF3IP1Q8TDR0 691 aaPredicted RBP24.8■■□□□ 1.56
CHKA-202ENST00000356135 ASB16Q96NS5 453 aa24.8■■□□□ 1.56
CHKA-202ENST00000356135 DCLK3Q9C098 648 aa24.8■■□□□ 1.56
CHKA-202ENST00000356135 RCOR3Q9P2K3 495 aaPredicted RBP24.8■■□□□ 1.56
CHKA-202ENST00000356135 ZMYM5Q9UJ78 669 aa24.8■■□□□ 1.56
CHKA-202ENST00000356135 LSM7Q9UK45 103 aaKnown RBP24.8■■□□□ 1.56
CHKA-202ENST00000356135 CDH7Q9ULB5 785 aa24.8■■□□□ 1.56
CHKA-202ENST00000356135 USP15Q9Y4E8 981 aaPredicted RBP24.8■■□□□ 1.56
CHKA-202ENST00000356135 CNTN5O94779 1100 aa24.8■■□□□ 1.56
CHKA-202ENST00000356135 MTHFRP42898 656 aa24.8■■□□□ 1.56
CHKA-202ENST00000356135 NRG1Q02297 640 aaPredicted RBP24.8■■□□□ 1.56
CHKA-202ENST00000356135 ZNF77Q15935 545 aa24.8■■□□□ 1.56
CHKA-202ENST00000356135 ALFQ53S48 1182 aa24.8■■□□□ 1.56
CHKA-202ENST00000356135 C1orf228Q6PIY5 440 aa24.8■■□□□ 1.56
CHKA-202ENST00000356135 CIR1Q86X95 450 aaPredicted RBP24.8■■□□□ 1.56
CHKA-202ENST00000356135 VSIG1Q86XK7 387 aa24.8■■□□□ 1.56
CHKA-202ENST00000356135 GDE1Q9NZC3 331 aa24.8■■□□□ 1.56
CHKA-202ENST00000356135 EFR3BQ9Y2G0 817 aa24.8■■□□□ 1.56
CHKA-202ENST00000356135 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.79■■□□□ 1.56
CHKA-202ENST00000356135 KRIT1O00522 736 aa24.79■■□□□ 1.56
CHKA-202ENST00000356135 MAP3K6O95382 1288 aa24.79■■□□□ 1.56
CHKA-202ENST00000356135 SP100P23497 879 aaPredicted RBP24.79■■□□□ 1.56
CHKA-202ENST00000356135 HCAR3P49019 387 aa24.79■■□□□ 1.56
CHKA-202ENST00000356135 KCTD19Q17RG1 926 aaPredicted RBP24.79■■□□□ 1.56
CHKA-202ENST00000356135 SLC9A4Q6AI14 798 aa24.79■■□□□ 1.56
CHKA-202ENST00000356135 C8orf74Q6P047 294 aa24.79■■□□□ 1.56
CHKA-202ENST00000356135 LRRC31Q6UY01 552 aa24.79■■□□□ 1.56
CHKA-202ENST00000356135 CCDC33Q8N5R6 958 aa24.79■■□□□ 1.56
CHKA-202ENST00000356135 PLD5Q8N7P1 536 aa24.79■■□□□ 1.56
CHKA-202ENST00000356135 C1orf54Q8WWF1 131 aa24.79■■□□□ 1.56
CHKA-202ENST00000356135 TBC1D31Q96DN5 1066 aa24.79■■□□□ 1.56
CHKA-202ENST00000356135 RPRD1AQ96P16 312 aaPredicted RBP24.79■■□□□ 1.56
CHKA-202ENST00000356135 UBE2ZQ9H832 354 aaPredicted RBP24.79■■□□□ 1.56
CHKA-202ENST00000356135 STOML2Q9UJZ1 356 aa24.79■■□□□ 1.56
CHKA-202ENST00000356135 CCDC151A5D8V7 595 aa24.78■■□□□ 1.56
CHKA-202ENST00000356135 GRXCR2A6NFK2 248 aa24.78■■□□□ 1.56
CHKA-202ENST00000356135 ZNF487B1APH4 448 aa24.78■■□□□ 1.56
CHKA-202ENST00000356135 F5H5T6 163 aa24.78■■□□□ 1.56
CHKA-202ENST00000356135 APOL1O14791 398 aa24.78■■□□□ 1.56
CHKA-202ENST00000356135 PECAM1P16284 738 aaPredicted RBP24.78■■□□□ 1.56
CHKA-202ENST00000356135 GBP2P32456 591 aaPredicted RBP24.78■■□□□ 1.56
CHKA-202ENST00000356135 BRD3Q15059 726 aa24.78■■□□□ 1.56
CHKA-202ENST00000356135 NCBP2-AS2Q69YL0 99 aa24.78■■□□□ 1.56
CHKA-202ENST00000356135 BBS12Q6ZW61 710 aa24.78■■□□□ 1.56
CHKA-202ENST00000356135 ATG4AQ8WYN0 398 aa24.78■■□□□ 1.56
CHKA-202ENST00000356135 SMARCD2Q92925 531 aa24.78■■□□□ 1.56
CHKA-202ENST00000356135 P2RY11Q96G91 374 aa24.78■■□□□ 1.56
CHKA-202ENST00000356135 PRICKLE1Q96MT3 831 aaPredicted RBP24.78■■□□□ 1.56
CHKA-202ENST00000356135 LRRC1Q9BTT6 524 aa24.78■■□□□ 1.56
CHKA-202ENST00000356135 LINC00597Q9H2U6 94 aa24.78■■□□□ 1.56
CHKA-202ENST00000356135 NDFIP2Q9NV92 336 aa24.78■■□□□ 1.56
CHKA-202ENST00000356135 STIM2Q9P246 746 aa24.78■■□□□ 1.56
CHKA-202ENST00000356135 HELZP42694 1942 aaKnown RBP24.78■■□□□ 1.56
CHKA-202ENST00000356135 E2F8A0AVK6 867 aa24.77■■□□□ 1.56
CHKA-202ENST00000356135 DCLK1O15075 740 aa24.77■■□□□ 1.56
CHKA-202ENST00000356135 MCM3P25205 808 aa24.77■■□□□ 1.56
CHKA-202ENST00000356135 CLCN6P51797 869 aa24.77■■□□□ 1.56
CHKA-202ENST00000356135 RPS24P62847 133 aaKnown RBP24.77■■□□□ 1.56
CHKA-202ENST00000356135 MTA1Q13330 715 aa24.77■■□□□ 1.56
CHKA-202ENST00000356135 DDX42Q86XP3 938 aaKnown RBP eCLIP24.77■■□□□ 1.56
CHKA-202ENST00000356135 TP53INP2Q8IXH6 220 aa24.77■■□□□ 1.56
CHKA-202ENST00000356135 CELF5Q8N6W0 485 aaKnown RBP24.77■■□□□ 1.56
CHKA-202ENST00000356135 PRELID2Q8N945 189 aa24.77■■□□□ 1.56
CHKA-202ENST00000356135 SUSD6Q92537 303 aa24.77■■□□□ 1.56
CHKA-202ENST00000356135 HEY1Q9Y5J3 304 aa24.77■■□□□ 1.56
CHKA-202ENST00000356135 ZFP37Q9Y6Q3 630 aaPredicted RBP24.77■■□□□ 1.56
CHKA-202ENST00000356135 PRUNE2Q8WUY3 3088 aa24.77■■□□□ 1.56
CHKA-202ENST00000356135 IGLV3-10A0A075B6K4 115 aa24.77■■□□□ 1.56
CHKA-202ENST00000356135 DRGXA6NNA5 263 aa24.77■■□□□ 1.56
CHKA-202ENST00000356135 HOXC13P31276 330 aa24.77■■□□□ 1.56
CHKA-202ENST00000356135 GBE1Q04446 702 aa24.77■■□□□ 1.56
CHKA-202ENST00000356135 USP4Q13107 963 aa24.77■■□□□ 1.56
CHKA-202ENST00000356135 TFDP2Q14188 446 aa24.77■■□□□ 1.56
CHKA-202ENST00000356135 TANGO2Q6ICL3 276 aa24.77■■□□□ 1.56
CHKA-202ENST00000356135 LRRN4Q8WUT4 740 aa24.77■■□□□ 1.56
CHKA-202ENST00000356135 KRT12Q99456 494 aa24.77■■□□□ 1.56
CHKA-202ENST00000356135 GOLGA6L10A0A0M3HER8 536 aa24.76■■□□□ 1.55
CHKA-202ENST00000356135 LATS1O95835 1130 aa24.76■■□□□ 1.55
CHKA-202ENST00000356135 FCARP24071 287 aa24.76■■□□□ 1.55
CHKA-202ENST00000356135 WEE1P30291 646 aa24.76■■□□□ 1.55
CHKA-202ENST00000356135 VSNL1P62760 191 aa24.76■■□□□ 1.55
CHKA-202ENST00000356135 SLC10A2Q12908 348 aaPredicted RBP24.76■■□□□ 1.55
CHKA-202ENST00000356135 B4GALNT4Q76KP1 1039 aa24.76■■□□□ 1.55
CHKA-202ENST00000356135 TFAP2DQ7Z6R9 452 aa24.76■■□□□ 1.55
CHKA-202ENST00000356135 BHMTQ93088 406 aa24.76■■□□□ 1.55
CHKA-202ENST00000356135 ZYG11BQ9C0D3 744 aa24.76■■□□□ 1.55
CHKA-202ENST00000356135 PPARGC1AQ9UBK2 798 aaKnown RBP24.76■■□□□ 1.55
CHKA-202ENST00000356135 LAMP2P13473 410 aa24.75■■□□□ 1.55
CHKA-202ENST00000356135 ZNF135P52742 658 aaPredicted RBP24.75■■□□□ 1.55
CHKA-202ENST00000356135 SNX1Q13596 522 aa24.75■■□□□ 1.55
CHKA-202ENST00000356135 TPGS1Q6ZTW0 290 aa24.75■■□□□ 1.55
CHKA-202ENST00000356135 NPWQ8N729 165 aa24.75■■□□□ 1.55
CHKA-202ENST00000356135 ACTL9Q8TC94 416 aa24.75■■□□□ 1.55
CHKA-202ENST00000356135 ZNF510Q9Y2H8 683 aa24.75■■□□□ 1.55
CHKA-202ENST00000356135 WNT6Q9Y6F9 365 aa24.75■■□□□ 1.55
CHKA-202ENST00000356135 OTUD4Q01804 1114 aaKnown RBP24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms