RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 SLC6A3Q01959 620 aa17.31■□□□□ 0.36
PDLIM7-201ENST00000355572 BYSLQ13895 437 aaKnown RBP17.31■□□□□ 0.36
PDLIM7-201ENST00000355572 STARD3Q14849 445 aa17.31■□□□□ 0.36
PDLIM7-201ENST00000355572 PITRM1Q5JRX3 1037 aa17.31■□□□□ 0.36
PDLIM7-201ENST00000355572 SPDYCQ5MJ68 293 aa17.31■□□□□ 0.36
PDLIM7-201ENST00000355572 N4BP2L1Q5TBK1 243 aaPredicted RBP17.31■□□□□ 0.36
PDLIM7-201ENST00000355572 IL31Q6EBC2 164 aa17.31■□□□□ 0.36
PDLIM7-201ENST00000355572 SLC36A4Q6YBV0 504 aa17.31■□□□□ 0.36
PDLIM7-201ENST00000355572 SLC26A9Q7LBE3 791 aa17.31■□□□□ 0.36
PDLIM7-201ENST00000355572 FAM124AQ86V42 546 aa17.31■□□□□ 0.36
PDLIM7-201ENST00000355572 OR2T3Q8NH03 318 aa17.31■□□□□ 0.36
PDLIM7-201ENST00000355572 EPS8L1Q8TE68 723 aa17.31■□□□□ 0.36
PDLIM7-201ENST00000355572 TTC17Q96AE7 1141 aa17.31■□□□□ 0.36
PDLIM7-201ENST00000355572 FAM204AQ9H8W3 233 aa17.31■□□□□ 0.36
PDLIM7-201ENST00000355572 PIGVQ9NUD9 493 aa17.31■□□□□ 0.36
PDLIM7-201ENST00000355572 TMEM63CQ9P1W3 806 aa17.31■□□□□ 0.36
PDLIM7-201ENST00000355572 NOCTQ9UK39 431 aaKnown RBP17.31■□□□□ 0.36
PDLIM7-201ENST00000355572 SIK3Q9Y2K2 1263 aa17.31■□□□□ 0.36
PDLIM7-201ENST00000355572 TTC34A8MYJ7 566 aa17.3■□□□□ 0.36
PDLIM7-201ENST00000355572 NPC1O15118 1278 aa17.3■□□□□ 0.36
PDLIM7-201ENST00000355572 TIMM44O43615 452 aa17.3■□□□□ 0.36
PDLIM7-201ENST00000355572 SYNCRIPO60506 623 aaKnown RBP17.3■□□□□ 0.36
PDLIM7-201ENST00000355572 HSF2BPO75031 334 aa17.3■□□□□ 0.36
PDLIM7-201ENST00000355572 KCNK5O95279 499 aa17.3■□□□□ 0.36
PDLIM7-201ENST00000355572 IGLV3-19P01714 112 aa17.3■□□□□ 0.36
PDLIM7-201ENST00000355572 APOEP02649 317 aa17.3■□□□□ 0.36
PDLIM7-201ENST00000355572 C7P10643 843 aa17.3■□□□□ 0.36
PDLIM7-201ENST00000355572 MZF1P28698 734 aaPredicted RBP17.3■□□□□ 0.36
PDLIM7-201ENST00000355572 ACSL1P33121 698 aa17.3■□□□□ 0.36
PDLIM7-201ENST00000355572 KRT9P35527 623 aa17.3■□□□□ 0.36
PDLIM7-201ENST00000355572 FLT3P36888 993 aa17.3■□□□□ 0.36
PDLIM7-201ENST00000355572 STK19P49842 368 aaPredicted RBP17.3■□□□□ 0.36
PDLIM7-201ENST00000355572 JAM2P57087 298 aa17.3■□□□□ 0.36
PDLIM7-201ENST00000355572 RPS14P62263 151 aaKnown RBP17.3■□□□□ 0.36
PDLIM7-201ENST00000355572 NME3Q13232 169 aa17.3■□□□□ 0.36
PDLIM7-201ENST00000355572 CXorf57Q6NSI4 855 aaKnown RBP17.3■□□□□ 0.36
PDLIM7-201ENST00000355572 FBXL22Q6P050 247 aa17.3■□□□□ 0.36
PDLIM7-201ENST00000355572 XYLT1Q86Y38 959 aa17.3■□□□□ 0.36
PDLIM7-201ENST00000355572 ZNF397Q8NF99 534 aaPredicted RBP17.3■□□□□ 0.36
PDLIM7-201ENST00000355572 BTN2A3PQ96KV6 586 aa17.3■□□□□ 0.36
PDLIM7-201ENST00000355572 NPY6RQ99463 290 aa17.3■□□□□ 0.36
PDLIM7-201ENST00000355572 NLRC4Q9NPP4 1024 aa17.3■□□□□ 0.36
PDLIM7-201ENST00000355572 TMEM9BQ9NQ34 198 aa17.3■□□□□ 0.36
PDLIM7-201ENST00000355572 SERGEFQ9UGK8 458 aa17.3■□□□□ 0.36
PDLIM7-201ENST00000355572 SLCO3A1Q9UIG8 710 aa17.3■□□□□ 0.36
PDLIM7-201ENST00000355572 HS3ST4Q9Y661 456 aa17.3■□□□□ 0.36
PDLIM7-201ENST00000355572 CHD5Q8TDI0 1954 aa17.29■□□□□ 0.36
PDLIM7-201ENST00000355572 PCNX2A6NKB5 2137 aa17.29■□□□□ 0.36
PDLIM7-201ENST00000355572 SIN3BO75182 1162 aa17.29■□□□□ 0.36
PDLIM7-201ENST00000355572 GFPT2O94808 682 aa17.29■□□□□ 0.36
PDLIM7-201ENST00000355572 GJB6O95452 261 aa17.29■□□□□ 0.36
PDLIM7-201ENST00000355572 ADCY5O95622 1261 aa17.29■□□□□ 0.36
PDLIM7-201ENST00000355572 CFIP05156 583 aa17.29■□□□□ 0.36
PDLIM7-201ENST00000355572 GLI1P08151 1106 aa17.29■□□□□ 0.36
PDLIM7-201ENST00000355572 VAV1P15498 845 aa17.29■□□□□ 0.36
PDLIM7-201ENST00000355572 POLR2EP19388 210 aaKnown RBP17.29■□□□□ 0.36
PDLIM7-201ENST00000355572 GABRB2P47870 512 aa17.29■□□□□ 0.36
PDLIM7-201ENST00000355572 COPB1P53618 953 aaKnown RBP17.29■□□□□ 0.36
PDLIM7-201ENST00000355572 RNASE9P60153 205 aaKnown RBP17.29■□□□□ 0.36
PDLIM7-201ENST00000355572 NOMO3P69849 1222 aa17.29■□□□□ 0.36
PDLIM7-201ENST00000355572 CDK17Q00537 523 aa17.29■□□□□ 0.36
PDLIM7-201ENST00000355572 BNC1Q01954 994 aa17.29■□□□□ 0.36
PDLIM7-201ENST00000355572 ARID5AQ03989 594 aa17.29■□□□□ 0.36
PDLIM7-201ENST00000355572 UAP1L1Q3KQV9 507 aa17.29■□□□□ 0.36
PDLIM7-201ENST00000355572 CT47A1Q5JQC4 288 aaPredicted RBP17.29■□□□□ 0.36
PDLIM7-201ENST00000355572 EFHC1Q5JVL4 640 aa17.29■□□□□ 0.36
PDLIM7-201ENST00000355572 ZNF683Q8IZ20 524 aa17.29■□□□□ 0.36
PDLIM7-201ENST00000355572 CCAR2Q8N163 923 aaKnown RBP17.29■□□□□ 0.36
PDLIM7-201ENST00000355572 CPA5Q8WXQ8 436 aa17.29■□□□□ 0.36
PDLIM7-201ENST00000355572 PRCCQ92733 491 aaPredicted RBP17.29■□□□□ 0.36
PDLIM7-201ENST00000355572 ALG14Q96F25 216 aa17.29■□□□□ 0.36
PDLIM7-201ENST00000355572 RPL10LQ96L21 214 aaKnown RBP17.29■□□□□ 0.36
PDLIM7-201ENST00000355572 STK33Q9BYT3 514 aa17.29■□□□□ 0.36
PDLIM7-201ENST00000355572 IRX2Q9BZI1 471 aaPredicted RBP17.29■□□□□ 0.36
PDLIM7-201ENST00000355572 C6orf106Q9H6K1 298 aaPredicted RBP17.29■□□□□ 0.36
PDLIM7-201ENST00000355572 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.29■□□□□ 0.36
PDLIM7-201ENST00000355572 ERVW-1Q9UQF0 538 aa17.29■□□□□ 0.36
PDLIM7-201ENST00000355572 M0QYT0 321 aa17.28■□□□□ 0.36
PDLIM7-201ENST00000355572 PAGE1O75459 146 aa17.28■□□□□ 0.36
PDLIM7-201ENST00000355572 TOP3BO95985 862 aaKnown RBP17.28■□□□□ 0.36
PDLIM7-201ENST00000355572 ZNF18P17022 549 aa17.28■□□□□ 0.36
PDLIM7-201ENST00000355572 METAP1P53582 386 aa17.28■□□□□ 0.36
PDLIM7-201ENST00000355572 POLR2FP61218 127 aaKnown RBP17.28■□□□□ 0.36
PDLIM7-201ENST00000355572 FMO1Q01740 532 aa17.28■□□□□ 0.36
PDLIM7-201ENST00000355572 CDH18Q13634 790 aa17.28■□□□□ 0.36
PDLIM7-201ENST00000355572 PLEKHG6Q3KR16 790 aa17.28■□□□□ 0.36
PDLIM7-201ENST00000355572 PSAPL1Q6NUJ1 521 aa17.28■□□□□ 0.36
PDLIM7-201ENST00000355572 PHLDB2Q86SQ0 1253 aa17.28■□□□□ 0.36
PDLIM7-201ENST00000355572 DHX40Q8IX18 779 aaKnown RBP17.28■□□□□ 0.36
PDLIM7-201ENST00000355572 ATP6V0D2Q8N8Y2 350 aa17.28■□□□□ 0.36
PDLIM7-201ENST00000355572 CNTNAP3BQ96NU0 1288 aa17.28■□□□□ 0.36
PDLIM7-201ENST00000355572 GBP4Q96PP9 640 aa17.28■□□□□ 0.36
PDLIM7-201ENST00000355572 PCDHB18PQ96TA0 734 aa17.28■□□□□ 0.36
PDLIM7-201ENST00000355572 TBCBQ99426 244 aa17.28■□□□□ 0.36
PDLIM7-201ENST00000355572 CNTNAP3Q9BZ76 1288 aa17.28■□□□□ 0.36
PDLIM7-201ENST00000355572 FAM207AQ9NSI2 230 aaPredicted RBP17.28■□□□□ 0.36
PDLIM7-201ENST00000355572 VANGL2Q9ULK5 521 aa17.28■□□□□ 0.36
PDLIM7-201ENST00000355572 F5H5T6 163 aa17.27■□□□□ 0.36
PDLIM7-201ENST00000355572 H0Y626 953 aa17.27■□□□□ 0.36
PDLIM7-201ENST00000355572 GOLGA8SH3BPF8 625 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms