RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 RXFP2Q8WXD0 754 aa9.63□□□□□ -0.87
SMG6-202ENST00000354901 RSPH1Q8WYR4 309 aa9.63□□□□□ -0.87
SMG6-202ENST00000354901 TUBB6Q9BUF5 446 aa9.63□□□□□ -0.87
SMG6-202ENST00000354901 EIF2AQ9BY44 585 aaKnown RBP9.63□□□□□ -0.87
SMG6-202ENST00000354901 SPATC1LQ9H0A9 340 aa9.63□□□□□ -0.87
SMG6-202ENST00000354901 PDGFCQ9NRA1 345 aa9.63□□□□□ -0.87
SMG6-202ENST00000354901 MOSPD1Q9UJG1 213 aa9.63□□□□□ -0.87
SMG6-202ENST00000354901 GPC6Q9Y625 555 aaPredicted RBP9.63□□□□□ -0.87
SMG6-202ENST00000354901 AP4B1Q9Y6B7 739 aa9.63□□□□□ -0.87
SMG6-202ENST00000354901 IGKV6D-21A0A0A0MT36 114 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 FUOMA2VDF0 154 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 E5RJQ4 531 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 MED7O43513 233 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 VTNP04004 478 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 CDH3P22223 829 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 RPL10P27635 214 aaKnown RBP9.62□□□□□ -0.87
SMG6-202ENST00000354901 FDFT1P37268 417 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 PRAMEP78395 509 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 MXD4Q14582 209 aaPredicted RBP9.62□□□□□ -0.87
SMG6-202ENST00000354901 KLHL38Q2WGJ6 581 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 UGT2A3Q6UWM9 527 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 PCGF5Q86SE9 256 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 TTC13Q8NBP0 860 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 DCAKDQ8WVC6 231 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 ATP2A3Q93084 1043 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 COX4I2Q96KJ9 171 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 LPIN3Q9BQK8 851 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 MAGEB5Q9BZ81 275 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 SENP6Q9GZR1 1112 aaPredicted RBP9.62□□□□□ -0.87
SMG6-202ENST00000354901 ADARB2Q9NS39 739 aaKnown RBP9.62□□□□□ -0.87
SMG6-202ENST00000354901 PIH1D1Q9NWS0 290 aaKnown RBP9.62□□□□□ -0.87
SMG6-202ENST00000354901 PCDHGC3Q9UN70 934 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 AKT3Q9Y243 479 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 A0A087WZ62 844 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 TRIM49D1C9J1S8 452 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 PRPSAP2O60256 369 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 UGT1A9O60656 530 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 TRUB2O95900 331 aaKnown RBP9.62□□□□□ -0.87
SMG6-202ENST00000354901 PROCP04070 461 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 STAG3L1P0CL83 205 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 TCEA1P23193 301 aaKnown RBP9.62□□□□□ -0.87
SMG6-202ENST00000354901 NRF1Q16656 503 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 PDCD4Q53EL6 469 aaKnown RBP9.62□□□□□ -0.87
SMG6-202ENST00000354901 EGFLAMQ63HQ2 1017 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 MAP1SQ66K74 1059 aaPredicted RBP9.62□□□□□ -0.87
SMG6-202ENST00000354901 LBX2Q6XYB7 198 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 RNF19BQ6ZMZ0 732 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 RNF111Q6ZNA4 994 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 ZCCHC23Q6ZST2 131 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 MOB2Q70IA6 237 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 HPS6Q86YV9 775 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 DDHD1Q8NEL9 900 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 DCUN1D1Q96GG9 259 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 ZNF512Q96ME7 567 aaPredicted RBP9.62□□□□□ -0.87
SMG6-202ENST00000354901 FDXACB1Q9BRP7 624 aaPredicted RBP9.62□□□□□ -0.87
SMG6-202ENST00000354901 CCDC28BQ9BUN5 200 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 RNPEPQ9H4A4 650 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 UGT1A7Q9HAW7 530 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 UGT1A10Q9HAW8 530 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 UGT1A8Q9HAW9 530 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 RSL24D1Q9UHA3 163 aaKnown RBP9.62□□□□□ -0.87
SMG6-202ENST00000354901 UNCXA6NJT0 531 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 I3L4J1 428 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 APOC4-APOC2K7ER74 178 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 ACKR2O00590 384 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 TM7SF2O76062 418 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 APOC2P02655 101 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 FUCA1P04066 466 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 MX2P20592 715 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 NDST1P52848 882 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 AQP5P55064 265 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 ARPC4P59998 168 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 AMHR2Q16671 573 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 TRNP1Q6NT89 227 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 ADGRD1Q6QNK2 874 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 PACS1Q6VY07 963 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 POLNQ7Z5Q5 900 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 NIPA2Q8N8Q9 360 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 GRIN3AQ8TCU5 1115 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 TMEM176AQ96HP8 235 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 MAML3Q96JK9 1138 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 SNX27Q96L92 541 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 GPR20Q99678 358 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 TPK1Q9H3S4 243 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 Q9H521 79 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 ELP3Q9H9T3 547 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 PLGRKTQ9HBL7 147 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 PALMDQ9NP74 551 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 MTO1Q9Y2Z2 717 aaKnown RBP9.62□□□□□ -0.87
SMG6-202ENST00000354901 FADS3Q9Y5Q0 445 aa9.62□□□□□ -0.87
SMG6-202ENST00000354901 ZBTB42B2RXF5 422 aa9.61□□□□□ -0.87
SMG6-202ENST00000354901 MATN2O00339 956 aa9.61□□□□□ -0.87
SMG6-202ENST00000354901 MAGEB2O15479 319 aa9.61□□□□□ -0.87
SMG6-202ENST00000354901 CFLARO15519 480 aa9.61□□□□□ -0.87
SMG6-202ENST00000354901 CBFA2T3O75081 653 aa9.61□□□□□ -0.87
SMG6-202ENST00000354901 SEC24DO94855 1032 aaPredicted RBP9.61□□□□□ -0.87
SMG6-202ENST00000354901 HMGCRP04035 888 aa9.61□□□□□ -0.87
SMG6-202ENST00000354901 FGFR3P22607 806 aa9.61□□□□□ -0.87
SMG6-202ENST00000354901 RBL1P28749 1068 aa9.61□□□□□ -0.87
SMG6-202ENST00000354901 TKTP29401 623 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms