RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 CDH9Q9ULB4 789 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 PCDHA3Q9Y5H8 950 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 IQGAP1P46940 1657 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 TNS3Q68CZ2 1445 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 SH3D21A4FU49 640 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 DBTP11182 482 aaKnown RBP5.14□□□□□ -1.59
SKP1-202ENST00000353411 SEPHS1P49903 392 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 ETV1P50549 477 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 GSTM4Q03013 218 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 GPATCH4Q5T3I0 446 aaKnown RBP5.14□□□□□ -1.59
SKP1-202ENST00000353411 FAM102BQ5T8I3 360 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 ZNF57Q68EA5 555 aaPredicted RBP5.14□□□□□ -1.59
SKP1-202ENST00000353411 IQSEC1Q6DN90 963 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 PPP1R18Q6NYC8 613 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 KCTD8Q6ZWB6 473 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 PACRGLQ8N7B6 248 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 ZSCAN18Q8TBC5 510 aaPredicted RBP5.14□□□□□ -1.59
SKP1-202ENST00000353411 FAR1Q8WVX9 515 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 MYDGFQ969H8 173 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 C11orf70Q9BRQ4 267 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 TEKT3Q9BXF9 490 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 MUC13Q9H3R2 512 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 CHD2O14647 1828 aaKnown RBP5.14□□□□□ -1.59
SKP1-202ENST00000353411 DENRO43583 198 aaKnown RBP5.14□□□□□ -1.59
SKP1-202ENST00000353411 TIMM44O43615 452 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 DHFRP00374 187 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 CDK4P11802 303 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 SLC9A1P19634 815 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 XPAP23025 273 aaPredicted RBP5.14□□□□□ -1.59
SKP1-202ENST00000353411 WARSP23381 471 aaKnown RBP5.14□□□□□ -1.59
SKP1-202ENST00000353411 NUP62P37198 522 aaPredicted RBP5.14□□□□□ -1.59
SKP1-202ENST00000353411 NEK3P51956 506 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 ANO4Q32M45 955 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 TIGD2Q4W5G0 525 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 TIGD7Q6NT04 549 aaPredicted RBP5.14□□□□□ -1.59
SKP1-202ENST00000353411 ZNF767PQ75MW2 155 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 ASRGL1Q7L266 308 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 MPP5Q8N3R9 675 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 C10orf82Q8WW14 230 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 DCAF5Q96JK2 942 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 HGH1Q9BTY7 390 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 NMUR2Q9GZQ4 415 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.14□□□□□ -1.593e-9■■□□□ 13.9
SKP1-202ENST00000353411 MAD2L2Q9UI95 211 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 MAGED1Q9Y5V3 778 aaPredicted RBP5.14□□□□□ -1.59
SKP1-202ENST00000353411 DLC1Q96QB1 1528 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 E5RI56 91 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 EML1O00423 815 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 UBDO15205 165 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 KCNN4O15554 427 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 GRIN3BO60391 1043 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 PLEKHA8P1O95397 391 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 HSMCR30P0CW71 290 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 GARTP22102 1010 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 ACTR2P61160 394 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 POU5F1BQ06416 359 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 DLG1Q12959 904 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 CYP51A1Q16850 503 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 OTUD3Q5T2D3 398 aaPredicted RBP5.14□□□□□ -1.59
SKP1-202ENST00000353411 ANKRD13BQ86YJ7 626 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 ADHFE1Q8IWW8 467 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 C12orf43Q96C57 262 aaKnown RBP5.14□□□□□ -1.59
SKP1-202ENST00000353411 CEP295NLQ96MC4 621 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 MAGEB5Q9BZ81 275 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 SERHL2Q9H4I8 314 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 RSAD1Q9HA92 442 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 SERHLQ9NQF3 203 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 BARHL2Q9NY43 387 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 ANAPC2Q9UJX6 822 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 ADGRB2O60241 1585 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 VWDEQ8N2E2 1590 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 PLD2O14939 933 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 INPP4BO15327 924 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 GMFBP60983 142 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 CACNB1Q02641 598 aaPredicted RBP5.13□□□□□ -1.59
SKP1-202ENST00000353411 KLRC3Q07444 240 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 EFR3AQ14156 821 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 ZNF181Q2M3W8 571 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 TDRPQ86YL5 185 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 ETNPPLQ8TBG4 499 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 ASB12Q8WXK4 309 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 NSMCE2Q96MF7 247 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 ERMAPQ96PL5 475 aaPredicted RBP5.13□□□□□ -1.59
SKP1-202ENST00000353411 CATSPERZQ9NTU4 200 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 DDX43Q9NXZ2 648 aaKnown RBP5.13□□□□□ -1.59
SKP1-202ENST00000353411 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.13□□□□□ -1.591e-6■□□□□ 9.4
SKP1-202ENST00000353411 AP3M1Q9Y2T2 418 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 PRG3Q9Y2Y8 225 aaPredicted RBP5.13□□□□□ -1.59
SKP1-202ENST00000353411 HEY1Q9Y5J3 304 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 RCCD1A6NED2 376 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 IFNA14P01570 189 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 TCEA1P23193 301 aaKnown RBP5.13□□□□□ -1.59
SKP1-202ENST00000353411 TIE1P35590 1138 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 HSF2Q03933 536 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 DGCR6Q14129 220 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 UBAP2LQ14157 1087 aaKnown RBP5.13□□□□□ -1.59
SKP1-202ENST00000353411 FRG1Q14331 258 aaKnown RBP5.13□□□□□ -1.59
SKP1-202ENST00000353411 DCP2Q8IU60 420 aaKnown RBP5.13□□□□□ -1.59
SKP1-202ENST00000353411 MYO1HQ8N1T3 1032 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 IGDCC4Q8TDY8 1250 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms