RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 CDHR5Q9HBB8 845 aa16.35■□□□□ 0.21
PTPN11-201ENST00000351677 NMRAL1Q9HBL8 299 aa16.35■□□□□ 0.21
PTPN11-201ENST00000351677 ATP13A1Q9HD20 1204 aa16.35■□□□□ 0.21
PTPN11-201ENST00000351677 DOLKQ9UPQ8 538 aa16.35■□□□□ 0.21
PTPN11-201ENST00000351677 BLVRAP53004 296 aa16.35■□□□□ 0.21
PTPN11-201ENST00000351677 SEPHS2Q99611 448 aa16.35■□□□□ 0.21
PTPN11-201ENST00000351677 POMKQ9H5K3 350 aa16.35■□□□□ 0.21
PTPN11-201ENST00000351677 SYNDIG1Q9H7V2 258 aa16.35■□□□□ 0.21
PTPN11-201ENST00000351677 ACTR8Q9H981 624 aa16.35■□□□□ 0.21
PTPN11-201ENST00000351677 ZNF143P52747 638 aaPredicted RBP16.35■□□□□ 0.21
PTPN11-201ENST00000351677 RUNX1T1Q06455 604 aa16.35■□□□□ 0.21
PTPN11-201ENST00000351677 SLC34A1Q06495 639 aa16.35■□□□□ 0.21
PTPN11-201ENST00000351677 FASTKQ14296 549 aaKnown RBP16.35■□□□□ 0.21
PTPN11-201ENST00000351677 DUPD1Q68J44 220 aa16.35■□□□□ 0.21
PTPN11-201ENST00000351677 ART4Q93070 314 aa16.35■□□□□ 0.21
PTPN11-201ENST00000351677 ZBTB10Q96DT7 871 aa16.35■□□□□ 0.21
PTPN11-201ENST00000351677 SERPINB11Q96P15 392 aa16.35■□□□□ 0.21
PTPN11-201ENST00000351677 LRRC19Q9H756 370 aa16.35■□□□□ 0.21
PTPN11-201ENST00000351677 RAD54BQ9Y620 910 aa16.35■□□□□ 0.21
PTPN11-201ENST00000351677 RAB27AP51159 221 aa16.35■□□□□ 0.21
PTPN11-201ENST00000351677 ZNF284Q2VY69 593 aa16.35■□□□□ 0.21
PTPN11-201ENST00000351677 BBS7Q8IWZ6 715 aa16.35■□□□□ 0.21
PTPN11-201ENST00000351677 DCDC2CA8MYV0 355 aa16.35■□□□□ 0.21
PTPN11-201ENST00000351677 PTPN1P18031 435 aaKnown RBP16.35■□□□□ 0.21
PTPN11-201ENST00000351677 KPNA1P52294 538 aaPredicted RBP16.35■□□□□ 0.21
PTPN11-201ENST00000351677 NCKAP1LP55160 1127 aa16.35■□□□□ 0.21
PTPN11-201ENST00000351677 TAS2R40P59535 323 aa16.35■□□□□ 0.21
PTPN11-201ENST00000351677 CRYMQ14894 314 aa16.35■□□□□ 0.21
PTPN11-201ENST00000351677 SNX32Q86XE0 403 aa16.35■□□□□ 0.21
PTPN11-201ENST00000351677 LGI2Q8N0V4 545 aa16.35■□□□□ 0.21
PTPN11-201ENST00000351677 FBXO39Q8N4B4 442 aa16.35■□□□□ 0.21
PTPN11-201ENST00000351677 GDPD5Q8WTR4 605 aa16.35■□□□□ 0.21
PTPN11-201ENST00000351677 HIC2Q96JB3 615 aa16.35■□□□□ 0.21
PTPN11-201ENST00000351677 SNRNP25Q9BV90 132 aaKnown RBP16.35■□□□□ 0.21
PTPN11-201ENST00000351677 CDT1Q9H211 546 aa16.35■□□□□ 0.21
PTPN11-201ENST00000351677 ELOVL6Q9H5J4 265 aa16.35■□□□□ 0.21
PTPN11-201ENST00000351677 CRYL1Q9Y2S2 319 aa16.35■□□□□ 0.21
PTPN11-201ENST00000351677 MLNP12872 115 aa16.34■□□□□ 0.21
PTPN11-201ENST00000351677 YWHAQP27348 245 aa16.34■□□□□ 0.21
PTPN11-201ENST00000351677 TRAF2Q12933 501 aa16.34■□□□□ 0.21
PTPN11-201ENST00000351677 FSCN1Q16658 493 aaKnown RBP16.34■□□□□ 0.21
PTPN11-201ENST00000351677 PARP6Q2NL67 630 aa16.34■□□□□ 0.21
PTPN11-201ENST00000351677 NMD3Q96D46 503 aaKnown RBP16.34■□□□□ 0.21
PTPN11-201ENST00000351677 YME1L1Q96TA2 773 aa16.34■□□□□ 0.21
PTPN11-201ENST00000351677 CIPCQ9C0C6 399 aa16.34■□□□□ 0.21
PTPN11-201ENST00000351677 ELOVL4Q9GZR5 314 aa16.34■□□□□ 0.21
PTPN11-201ENST00000351677 VAV3Q9UKW4 847 aa16.34■□□□□ 0.21
PTPN11-201ENST00000351677 TNFSF13BQ9Y275 285 aa16.34■□□□□ 0.21
PTPN11-201ENST00000351677 GNG14A0A1W2PPG7 69 aa16.34■□□□□ 0.21
PTPN11-201ENST00000351677 CHADO15335 359 aa16.34■□□□□ 0.21
PTPN11-201ENST00000351677 MAFO75444 373 aaPredicted RBP16.34■□□□□ 0.21
PTPN11-201ENST00000351677 MAPK1P28482 360 aa16.34■□□□□ 0.21
PTPN11-201ENST00000351677 NOMO3P69849 1222 aa16.34■□□□□ 0.21
PTPN11-201ENST00000351677 TAF2Q6P1X5 1199 aa16.34■□□□□ 0.21
PTPN11-201ENST00000351677 PRKD2Q9BZL6 878 aa16.34■□□□□ 0.21
PTPN11-201ENST00000351677 BMT2Q1RMZ1 405 aa16.34■□□□□ 0.21
PTPN11-201ENST00000351677 SDE2Q6IQ49 451 aa16.34■□□□□ 0.21
PTPN11-201ENST00000351677 CCDC167Q9P0B6 97 aa16.34■□□□□ 0.21
PTPN11-201ENST00000351677 VTI1BQ9UEU0 232 aa16.34■□□□□ 0.21
PTPN11-201ENST00000351677 B4GALT5O43286 388 aa16.34■□□□□ 0.21
PTPN11-201ENST00000351677 CLPTM1O96005 669 aa16.34■□□□□ 0.21
PTPN11-201ENST00000351677 RAG1P15918 1043 aa16.34■□□□□ 0.21
PTPN11-201ENST00000351677 ZC3H12AQ5D1E8 599 aaKnown RBP16.34■□□□□ 0.21
PTPN11-201ENST00000351677 TMEM139Q8IV31 216 aa16.34■□□□□ 0.21
PTPN11-201ENST00000351677 WNT8BQ93098 351 aa16.34■□□□□ 0.21
PTPN11-201ENST00000351677 TMEM79Q9BSE2 394 aa16.34■□□□□ 0.21
PTPN11-201ENST00000351677 NMRK1Q9NWW6 199 aa16.34■□□□□ 0.21
PTPN11-201ENST00000351677 MREGQ8N565 214 aa16.33■□□□□ 0.21
PTPN11-201ENST00000351677 MGAT4DA6NG13 374 aa16.33■□□□□ 0.21
PTPN11-201ENST00000351677 IRF6O14896 467 aa16.33■□□□□ 0.21
PTPN11-201ENST00000351677 SNX3O60493 162 aa16.33■□□□□ 0.21
PTPN11-201ENST00000351677 PARNO95453 639 aaKnown RBP16.33■□□□□ 0.21
PTPN11-201ENST00000351677 MYL4P12829 197 aa16.33■□□□□ 0.21
PTPN11-201ENST00000351677 NOS2P35228 1153 aa16.33■□□□□ 0.21
PTPN11-201ENST00000351677 CAMK2GQ13555 558 aaPredicted RBP16.33■□□□□ 0.21
PTPN11-201ENST00000351677 PRAMEF19Q5SWL8 479 aa16.33■□□□□ 0.21
PTPN11-201ENST00000351677 TMC7Q7Z402 723 aa16.33■□□□□ 0.21
PTPN11-201ENST00000351677 GLT6D1Q7Z4J2 308 aa16.33■□□□□ 0.21
PTPN11-201ENST00000351677 CASP10Q92851 521 aa16.33■□□□□ 0.21
PTPN11-201ENST00000351677 INPP4AQ96PE3 977 aaPredicted RBP16.33■□□□□ 0.21
PTPN11-201ENST00000351677 EMILIN2Q9BXX0 1053 aa16.33■□□□□ 0.21
PTPN11-201ENST00000351677 FAM237BA0A1B0GVD1 139 aa16.33■□□□□ 0.2
PTPN11-201ENST00000351677 KANSL1LA0AUZ9 987 aa16.33■□□□□ 0.2
PTPN11-201ENST00000351677 PROCP04070 461 aa16.33■□□□□ 0.2
PTPN11-201ENST00000351677 AKR1A1P14550 325 aa16.33■□□□□ 0.2
PTPN11-201ENST00000351677 ARL4DP49703 201 aa16.33■□□□□ 0.2
PTPN11-201ENST00000351677 ELF3P78545 371 aaPredicted RBP16.33■□□□□ 0.2
PTPN11-201ENST00000351677 LZTR1Q8N653 840 aa16.33■□□□□ 0.2
PTPN11-201ENST00000351677 ARRDC4Q8NCT1 418 aa16.33■□□□□ 0.2
PTPN11-201ENST00000351677 KANSL3Q9P2N6 904 aa16.33■□□□□ 0.2
PTPN11-201ENST00000351677 OR12D3Q9UGF7 316 aa16.33■□□□□ 0.2
PTPN11-201ENST00000351677 CROTQ9UKG9 612 aa16.33■□□□□ 0.2
PTPN11-201ENST00000351677 ANKRD6Q9Y2G4 727 aa16.33■□□□□ 0.2
PTPN11-201ENST00000351677 TRPV2Q9Y5S1 764 aa16.33■□□□□ 0.2
PTPN11-201ENST00000351677 STAU1O95793 577 aaKnown RBP16.33■□□□□ 0.2
PTPN11-201ENST00000351677 RPLP2P05387 115 aaKnown RBP16.33■□□□□ 0.2
PTPN11-201ENST00000351677 CACNA2D1P54289 1103 aa16.33■□□□□ 0.2
PTPN11-201ENST00000351677 CYP2R1Q6VVX0 501 aa16.33■□□□□ 0.2
PTPN11-201ENST00000351677 KYAT3Q6YP21 454 aaKnown RBP16.33■□□□□ 0.2
PTPN11-201ENST00000351677 PHF13Q86YI8 300 aaPredicted RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms