RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 EIF4EBP2Q13542 120 aaPredicted RBP17.16■□□□□ 0.34
SAMM50-201ENST00000350028 CLLU1OSQ5K130 101 aa17.16■□□□□ 0.34
SAMM50-201ENST00000350028 BTBD8Q5XKL5 378 aa17.16■□□□□ 0.34
SAMM50-201ENST00000350028 FAM47EQ6ZV65 393 aa17.16■□□□□ 0.34
SAMM50-201ENST00000350028 ZNF280BQ86YH2 543 aa17.16■□□□□ 0.34
SAMM50-201ENST00000350028 COLGALT2Q8IYK4 626 aa17.16■□□□□ 0.34
SAMM50-201ENST00000350028 GBP7Q8N8V2 638 aaPredicted RBP17.16■□□□□ 0.34
SAMM50-201ENST00000350028 NETO2Q8NC67 525 aa17.16■□□□□ 0.34
SAMM50-201ENST00000350028 VAT1Q99536 393 aa17.16■□□□□ 0.34
SAMM50-201ENST00000350028 FTHL17Q9BXU8 183 aa17.16■□□□□ 0.34
SAMM50-201ENST00000350028 ARHGEF38Q9NXL2 777 aa17.16■□□□□ 0.34
SAMM50-201ENST00000350028 SAGE1Q9NXZ1 904 aa17.16■□□□□ 0.34
SAMM50-201ENST00000350028 TNFRSF10BO14763 440 aa17.15■□□□□ 0.34
SAMM50-201ENST00000350028 ALDH1A2O94788 518 aa17.15■□□□□ 0.34
SAMM50-201ENST00000350028 LRIG2O94898 1065 aa17.15■□□□□ 0.34
SAMM50-201ENST00000350028 OAZ2O95190 189 aa17.15■□□□□ 0.34
SAMM50-201ENST00000350028 PYGBP11216 843 aa17.15■□□□□ 0.34
SAMM50-201ENST00000350028 ADRA1DP25100 572 aa17.15■□□□□ 0.34
SAMM50-201ENST00000350028 EPHB2P29323 1055 aa17.15■□□□□ 0.34
SAMM50-201ENST00000350028 HTR7P34969 479 aa17.15■□□□□ 0.34
SAMM50-201ENST00000350028 COG7P83436 770 aa17.15■□□□□ 0.34
SAMM50-201ENST00000350028 MBTPS1Q14703 1052 aa17.15■□□□□ 0.34
SAMM50-201ENST00000350028 TP53INP2Q8IXH6 220 aa17.15■□□□□ 0.34
SAMM50-201ENST00000350028 ZNF296Q8WUU4 475 aaPredicted RBP17.15■□□□□ 0.34
SAMM50-201ENST00000350028 LINC01599Q8WXQ3 324 aa17.15■□□□□ 0.34
SAMM50-201ENST00000350028 TTC17Q96AE7 1141 aa17.15■□□□□ 0.34
SAMM50-201ENST00000350028 HAPLN3Q96S86 360 aa17.15■□□□□ 0.34
SAMM50-201ENST00000350028 ZCWPW1Q9H0M4 648 aa17.15■□□□□ 0.34
SAMM50-201ENST00000350028 STARD7Q9NQZ5 370 aa17.15■□□□□ 0.34
SAMM50-201ENST00000350028 A0A1W2PQ45 241 aaPredicted RBP17.14■□□□□ 0.33
SAMM50-201ENST00000350028 A0A1W2PQY0 241 aa17.14■□□□□ 0.33
SAMM50-201ENST00000350028 WDR27A2RRH5 827 aa17.14■□□□□ 0.33
SAMM50-201ENST00000350028 ERI2A8K979 691 aaKnown RBP17.14■□□□□ 0.33
SAMM50-201ENST00000350028 F8W810 466 aa17.14■□□□□ 0.33
SAMM50-201ENST00000350028 IRAK2O43187 625 aa17.14■□□□□ 0.33
SAMM50-201ENST00000350028 DNAJC8O75937 253 aaPredicted RBP17.14■□□□□ 0.33
SAMM50-201ENST00000350028 DHRS4L1P0CG22 281 aa17.14■□□□□ 0.33
SAMM50-201ENST00000350028 PGAM1P18669 254 aa17.14■□□□□ 0.33
SAMM50-201ENST00000350028 CNTFP26441 200 aa17.14■□□□□ 0.33
SAMM50-201ENST00000350028 SLC5A3P53794 718 aa17.14■□□□□ 0.33
SAMM50-201ENST00000350028 ZNF33AQ06730 810 aa17.14■□□□□ 0.33
SAMM50-201ENST00000350028 NAB1Q13506 487 aa17.14■□□□□ 0.33
SAMM50-201ENST00000350028 SPRED3Q2MJR0 410 aa17.14■□□□□ 0.33
SAMM50-201ENST00000350028 TTC31Q49AM3 519 aaPredicted RBP17.14■□□□□ 0.33
SAMM50-201ENST00000350028 ITPRIPL1Q6GPH6 555 aa17.14■□□□□ 0.33
SAMM50-201ENST00000350028 NPWQ8N729 165 aa17.14■□□□□ 0.33
SAMM50-201ENST00000350028 SCAMP5Q8TAC9 235 aa17.14■□□□□ 0.33
SAMM50-201ENST00000350028 DEPDC1BQ8WUY9 529 aa17.14■□□□□ 0.33
SAMM50-201ENST00000350028 FAM193BQ96PV7 902 aaPredicted RBP17.14■□□□□ 0.33
SAMM50-201ENST00000350028 CEP41Q9BYV8 373 aa17.14■□□□□ 0.33
SAMM50-201ENST00000350028 ABCF3Q9NUQ8 709 aa17.14■□□□□ 0.33
SAMM50-201ENST00000350028 WBP1LQ9NX94 342 aa17.14■□□□□ 0.33
SAMM50-201ENST00000350028 MKS1Q9NXB0 559 aa17.14■□□□□ 0.33
SAMM50-201ENST00000350028 SLC17A7Q9P2U7 560 aa17.14■□□□□ 0.33
SAMM50-201ENST00000350028 SNX10Q9Y5X0 201 aa17.14■□□□□ 0.33
SAMM50-201ENST00000350028 F5H423 210 aaPredicted RBP17.13■□□□□ 0.33
SAMM50-201ENST00000350028 KCNK1O00180 336 aa17.13■□□□□ 0.33
SAMM50-201ENST00000350028 COPEO14579 308 aa17.13■□□□□ 0.33
SAMM50-201ENST00000350028 B4GALT3O60512 393 aa17.13■□□□□ 0.33
SAMM50-201ENST00000350028 CSH1P0DML2 217 aa17.13■□□□□ 0.33
SAMM50-201ENST00000350028 CSH2P0DML3 217 aa17.13■□□□□ 0.33
SAMM50-201ENST00000350028 MGAT1P26572 445 aa17.13■□□□□ 0.33
SAMM50-201ENST00000350028 CCNFP41002 786 aa17.13■□□□□ 0.33
SAMM50-201ENST00000350028 GARSP41250 739 aaKnown RBP17.13■□□□□ 0.33
SAMM50-201ENST00000350028 OR1G1P47890 313 aa17.13■□□□□ 0.33
SAMM50-201ENST00000350028 SESN2P58004 480 aaPredicted RBP17.13■□□□□ 0.33
SAMM50-201ENST00000350028 NFE2Q16621 373 aaPredicted RBP17.13■□□□□ 0.33
SAMM50-201ENST00000350028 LHX8Q68G74 356 aa17.13■□□□□ 0.33
SAMM50-201ENST00000350028 CASC4Q6P4E1 433 aa17.13■□□□□ 0.33
SAMM50-201ENST00000350028 TRMT10BQ6PF06 316 aaKnown RBP17.13■□□□□ 0.33
SAMM50-201ENST00000350028 MARK2Q7KZI7 788 aaKnown RBP17.13■□□□□ 0.33
SAMM50-201ENST00000350028 CHSY1Q86X52 802 aa17.13■□□□□ 0.33
SAMM50-201ENST00000350028 ZNF276Q8N554 614 aa17.13■□□□□ 0.33
SAMM50-201ENST00000350028 CDKL2Q92772 493 aa17.13■□□□□ 0.33
SAMM50-201ENST00000350028 OXNAD1Q96HP4 312 aaPredicted RBP17.13■□□□□ 0.33
SAMM50-201ENST00000350028 FUBP3Q96I24 572 aaKnown RBP eCLIP17.13■□□□□ 0.33
SAMM50-201ENST00000350028 SMOC2Q9H3U7 446 aa17.13■□□□□ 0.33
SAMM50-201ENST00000350028 HMX1Q9NP08 348 aaPredicted RBP17.13■□□□□ 0.33
SAMM50-201ENST00000350028 TBC1D13Q9NVG8 400 aa17.13■□□□□ 0.33
SAMM50-201ENST00000350028 TMEM161AQ9NX61 479 aa17.13■□□□□ 0.33
SAMM50-201ENST00000350028 SLC12A4Q9UP95 1085 aa17.13■□□□□ 0.33
SAMM50-201ENST00000350028 ARVCFO00192 962 aa17.13■□□□□ 0.33
SAMM50-201ENST00000350028 AP2A1O95782 977 aa17.13■□□□□ 0.33
SAMM50-201ENST00000350028 ETV4P43268 484 aa17.13■□□□□ 0.33
SAMM50-201ENST00000350028 GALNTL6Q49A17 601 aa17.13■□□□□ 0.33
SAMM50-201ENST00000350028 SLC39A12Q504Y0 691 aa17.13■□□□□ 0.33
SAMM50-201ENST00000350028 TEX44Q53QW1 395 aa17.13■□□□□ 0.33
SAMM50-201ENST00000350028 TIFABQ6ZNK6 161 aa17.13■□□□□ 0.33
SAMM50-201ENST00000350028 FAM43BQ6ZT52 329 aaPredicted RBP17.13■□□□□ 0.33
SAMM50-201ENST00000350028 CCDC63Q8NA47 563 aa17.13■□□□□ 0.33
SAMM50-201ENST00000350028 ARNTL2Q8WYA1 636 aa17.13■□□□□ 0.33
SAMM50-201ENST00000350028 SPOCK2Q92563 424 aa17.13■□□□□ 0.33
SAMM50-201ENST00000350028 IQCGQ9H095 443 aaKnown RBP17.13■□□□□ 0.33
SAMM50-201ENST00000350028 ELAC1Q9H777 363 aaKnown RBP17.13■□□□□ 0.33
SAMM50-201ENST00000350028 RXFP1Q9HBX9 757 aa17.13■□□□□ 0.33
SAMM50-201ENST00000350028 SYN3O14994 580 aa17.12■□□□□ 0.33
SAMM50-201ENST00000350028 PSMD3O43242 534 aa17.12■□□□□ 0.33
SAMM50-201ENST00000350028 RFPL1O75677 317 aa17.12■□□□□ 0.33
SAMM50-201ENST00000350028 INHAP05111 366 aa17.12■□□□□ 0.33
SAMM50-201ENST00000350028 CCR1P32246 355 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms