RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 A8MXQ7 604 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 H0Y3Z8 333 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 MAGEB2O15479 319 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 TLR2O60603 784 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 GAS7O60861 476 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 PHF2O75151 1096 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 TCEA3O75764 348 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 PSMG1O95456 288 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 LYNP07948 512 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 ITGA2BP08514 1039 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 FAM228BP0C875 321 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 MYBL1P10243 752 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 SCG2P13521 617 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 SLC9A1P19634 815 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 PRDX5P30044 214 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 LSSP48449 732 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 KCNC1P48547 511 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 CLCN2P51788 898 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 PLTPP55058 493 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 INHBCP55103 352 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 POLR2FP61218 127 aaKnown RBP8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 PHC1P78364 1004 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 IL13RA1P78552 427 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 ALDH6A1Q02252 535 aaKnown RBP8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 SF3A3Q12874 501 aaKnown RBP eCLIP8.03□□□□□ -1.122e-8■□□□□ 10.5
UBE2D3-204ENST00000349311 MAPK7Q13164 816 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 CBX3Q13185 183 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 ORC2Q13416 577 aaPredicted RBP8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 RCN1Q15293 331 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 NPY5RQ15761 445 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 ADRM1Q16186 407 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 KBTBD12Q3ZCT8 623 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 GPR158Q5T848 1215 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 GALNT17Q6IS24 598 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 ZDHHC24Q6UX98 284 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 C4orf50Q6ZRC1 276 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 RGS9BPQ6ZS82 235 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 SEPT14Q6ZU15 432 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 TMTC3Q6ZXV5 915 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 CCDC80Q76M96 950 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 STRA8Q7Z7C7 330 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 ADGRA1Q86SQ6 560 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 NT5DC3Q86UY8 548 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 ANKRD35Q8N283 1001 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 SLC17A8Q8NDX2 589 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 TTC8Q8TAM2 541 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 MGARPQ8TDB4 240 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 NAT14Q8WUY8 206 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 ERP27Q96DN0 273 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 CALML4Q96GE6 196 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 FOXB1Q99853 325 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 PITPNM3Q9BZ71 974 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 CRNKL1Q9BZJ0 848 aaKnown RBP8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 TRIM31Q9BZY9 425 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 NT5C3AQ9H0P0 336 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 DENND2DQ9H6A0 471 aaPredicted RBP8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 ZMAT4Q9H898 229 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 UCKL1Q9NWZ5 548 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 PTTG2Q9NZH5 202 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 STX18Q9P2W9 335 aaKnown RBP8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 ARMCX3Q9UH62 379 aaPredicted RBP8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 DDX25Q9UHL0 483 aaKnown RBP8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 LGALS13Q9UHV8 139 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 HAO1Q9UJM8 370 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 SSX2IPQ9Y2D8 614 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 SH3GLB1Q9Y371 365 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 COL4A3BPQ9Y5P4 624 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 ARID1BQ8NFD5 2236 aaPredicted RBP8.02□□□□□ -1.13
UBE2D3-204ENST00000349311 CCDC194A0A1B0GVG4 234 aa8.02□□□□□ -1.13
UBE2D3-204ENST00000349311 CCDC22O60826 627 aa8.02□□□□□ -1.13
UBE2D3-204ENST00000349311 PRDM1O75626 825 aa8.02□□□□□ -1.13
UBE2D3-204ENST00000349311 PRLP01236 227 aa8.02□□□□□ -1.13
UBE2D3-204ENST00000349311 FGGP02679 453 aa8.02□□□□□ -1.13
UBE2D3-204ENST00000349311 PABPC4LP0CB38 370 aaKnown RBP8.02□□□□□ -1.13
UBE2D3-204ENST00000349311 ALAS1P13196 640 aa8.02□□□□□ -1.13
UBE2D3-204ENST00000349311 TAC1P20366 129 aa8.02□□□□□ -1.13
UBE2D3-204ENST00000349311 EPHB2P29323 1055 aa8.02□□□□□ -1.13
UBE2D3-204ENST00000349311 RGS2P41220 211 aa8.02□□□□□ -1.13
UBE2D3-204ENST00000349311 PRKCIP41743 596 aa8.02□□□□□ -1.13
UBE2D3-204ENST00000349311 EPS15P42566 896 aa8.02□□□□□ -1.13
UBE2D3-204ENST00000349311 ECE1P42892 770 aa8.02□□□□□ -1.13
UBE2D3-204ENST00000349311 GLRBP48167 497 aa8.02□□□□□ -1.13
UBE2D3-204ENST00000349311 PHEXP78562 749 aa8.02□□□□□ -1.13
UBE2D3-204ENST00000349311 CDR2Q01850 454 aa8.02□□□□□ -1.13
UBE2D3-204ENST00000349311 MGAT5Q09328 741 aa8.02□□□□□ -1.13
UBE2D3-204ENST00000349311 STK4Q13043 487 aa8.02□□□□□ -1.13
UBE2D3-204ENST00000349311 CYLC2Q14093 348 aaPredicted RBP8.02□□□□□ -1.13
UBE2D3-204ENST00000349311 LRRC32Q14392 662 aa8.02□□□□□ -1.13
UBE2D3-204ENST00000349311 R3HDM1Q15032 1099 aaKnown RBP8.02□□□□□ -1.13
UBE2D3-204ENST00000349311 SLC45A4Q5BKX6 768 aa8.02□□□□□ -1.13
UBE2D3-204ENST00000349311 C6orf163Q5TEZ5 329 aa8.02□□□□□ -1.13
UBE2D3-204ENST00000349311 PRAMEF18Q5VWM3 479 aa8.02□□□□□ -1.13
UBE2D3-204ENST00000349311 VSTM1Q6UX27 236 aa8.02□□□□□ -1.13
UBE2D3-204ENST00000349311 DZIP1Q86YF9 867 aaKnown RBP8.02□□□□□ -1.13
UBE2D3-204ENST00000349311 PASD1Q8IV76 773 aa8.02□□□□□ -1.13
UBE2D3-204ENST00000349311 RTKN2Q8IZC4 609 aa8.02□□□□□ -1.13
UBE2D3-204ENST00000349311 BLIDQ8IZY5 108 aa8.02□□□□□ -1.13
UBE2D3-204ENST00000349311 RIBC1Q8N443 379 aaPredicted RBP8.02□□□□□ -1.13
UBE2D3-204ENST00000349311 ANKRD42Q8N9B4 389 aa8.02□□□□□ -1.13
UBE2D3-204ENST00000349311 WDR60Q8WVS4 1066 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms