RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 NOD1Q9Y239 953 aa21.92■■□□□ 1.1
PTPN18-202ENST00000347849 SEC23IPQ9Y6Y8 1000 aaKnown RBP21.92■■□□□ 1.1
PTPN18-202ENST00000347849 E7ESA3 106 aa21.92■■□□□ 1.1
PTPN18-202ENST00000347849 TGDSO95455 350 aa21.92■■□□□ 1.1
PTPN18-202ENST00000347849 FYNP06241 537 aa21.92■■□□□ 1.1
PTPN18-202ENST00000347849 CST5P28325 142 aaPredicted RBP21.92■■□□□ 1.1
PTPN18-202ENST00000347849 SULT1E1P49888 294 aa21.92■■□□□ 1.1
PTPN18-202ENST00000347849 KRT72Q14CN4 511 aa21.92■■□□□ 1.1
PTPN18-202ENST00000347849 DPYSL2Q16555 572 aa21.92■■□□□ 1.1
PTPN18-202ENST00000347849 FAM35AQ86V20 835 aa21.92■■□□□ 1.1
PTPN18-202ENST00000347849 ALYREFQ86V81 257 aaKnown RBP21.92■■□□□ 1.1
PTPN18-202ENST00000347849 APLFQ8IW19 511 aaPredicted RBP21.92■■□□□ 1.1
PTPN18-202ENST00000347849 FAF2Q96CS3 445 aa21.92■■□□□ 1.1
PTPN18-202ENST00000347849 NMUR2Q9GZQ4 415 aa21.92■■□□□ 1.1
PTPN18-202ENST00000347849 WASF2Q9Y6W5 498 aa21.92■■□□□ 1.1
PTPN18-202ENST00000347849 IQANK1A0A1B0GTG1 560 aa21.91■■□□□ 1.1
PTPN18-202ENST00000347849 ZNF623O75123 536 aa21.91■■□□□ 1.1
PTPN18-202ENST00000347849 AMHP03971 560 aa21.91■■□□□ 1.1
PTPN18-202ENST00000347849 DHRS4L1P0CG22 281 aa21.91■■□□□ 1.1
PTPN18-202ENST00000347849 GOT1P17174 413 aa21.91■■□□□ 1.1
PTPN18-202ENST00000347849 SCNN1AP37088 669 aa21.91■■□□□ 1.1
PTPN18-202ENST00000347849 ELK3P41970 407 aa21.91■■□□□ 1.1
PTPN18-202ENST00000347849 YWHAZP63104 245 aaKnown RBP21.91■■□□□ 1.1
PTPN18-202ENST00000347849 AP1B1Q10567 949 aa21.91■■□□□ 1.1
PTPN18-202ENST00000347849 EFHC1Q5JVL4 640 aa21.91■■□□□ 1.1
PTPN18-202ENST00000347849 FAXCQ5TGI0 409 aa21.91■■□□□ 1.1
PTPN18-202ENST00000347849 ARCQ7LC44 396 aa21.91■■□□□ 1.1
PTPN18-202ENST00000347849 ADAM32Q8TC27 787 aa21.91■■□□□ 1.1
PTPN18-202ENST00000347849 CAPNS2Q96L46 248 aa21.91■■□□□ 1.1
PTPN18-202ENST00000347849 ZNF670Q9BS34 389 aa21.91■■□□□ 1.1
PTPN18-202ENST00000347849 ULBP1Q9BZM6 244 aa21.91■■□□□ 1.1
PTPN18-202ENST00000347849 LRRC4Q9HBW1 653 aa21.91■■□□□ 1.1
PTPN18-202ENST00000347849 THSD7BQ9C0I4 1608 aa21.91■■□□□ 1.1
PTPN18-202ENST00000347849 YJEFN3A6XGL0 299 aa21.91■■□□□ 1.1
PTPN18-202ENST00000347849 B2RBV5 119 aa21.91■■□□□ 1.1
PTPN18-202ENST00000347849 KCNN4O15554 427 aa21.91■■□□□ 1.1
PTPN18-202ENST00000347849 B4GALT3O60512 393 aa21.91■■□□□ 1.1
PTPN18-202ENST00000347849 AP1G2O75843 785 aa21.91■■□□□ 1.1
PTPN18-202ENST00000347849 FAM200BP0CF97 657 aa21.91■■□□□ 1.1
PTPN18-202ENST00000347849 AMPD1P23109 780 aa21.91■■□□□ 1.1
PTPN18-202ENST00000347849 ZRSR2Q15696 482 aaKnown RBP21.91■■□□□ 1.1
PTPN18-202ENST00000347849 KBTBD12Q3ZCT8 623 aa21.91■■□□□ 1.1
PTPN18-202ENST00000347849 MAP3K21Q5TCX8 1036 aa21.91■■□□□ 1.1
PTPN18-202ENST00000347849 CFAP61Q8NHU2 1237 aa21.91■■□□□ 1.1
PTPN18-202ENST00000347849 TMEM209Q96SK2 561 aa21.91■■□□□ 1.1
PTPN18-202ENST00000347849 SRRDQ9UH36 339 aa21.91■■□□□ 1.1
PTPN18-202ENST00000347849 SNUPNO95149 360 aaKnown RBP21.9■■□□□ 1.1
PTPN18-202ENST00000347849 NEK3P51956 506 aa21.9■■□□□ 1.1
PTPN18-202ENST00000347849 MBTPS1Q14703 1052 aa21.9■■□□□ 1.1
PTPN18-202ENST00000347849 RBBP5Q15291 538 aaKnown RBP21.9■■□□□ 1.1
PTPN18-202ENST00000347849 SLC25A52Q3SY17 297 aa21.9■■□□□ 1.1
PTPN18-202ENST00000347849 RTN4RL1Q86UN2 441 aaPredicted RBP21.9■■□□□ 1.1
PTPN18-202ENST00000347849 CHSY1Q86X52 802 aa21.9■■□□□ 1.1
PTPN18-202ENST00000347849 APOPT1Q96IL0 206 aa21.9■■□□□ 1.1
PTPN18-202ENST00000347849 FAM161BQ96MY7 647 aa21.9■■□□□ 1.1
PTPN18-202ENST00000347849 CSPG4P5Q96PW8 444 aa21.9■■□□□ 1.1
PTPN18-202ENST00000347849 MAP3K7O43318 606 aa21.9■■□□□ 1.1
PTPN18-202ENST00000347849 INHBAP08476 426 aa21.9■■□□□ 1.1
PTPN18-202ENST00000347849 YY1P25490 414 aa21.9■■□□□ 1.1
PTPN18-202ENST00000347849 NME3Q13232 169 aa21.9■■□□□ 1.1
PTPN18-202ENST00000347849 CWF19L1Q69YN2 538 aaKnown RBP21.9■■□□□ 1.1
PTPN18-202ENST00000347849 SIX6OS1Q8N1H7 587 aa21.9■■□□□ 1.1
PTPN18-202ENST00000347849 KCTD13Q8WZ19 329 aa21.9■■□□□ 1.1
PTPN18-202ENST00000347849 MMADHCQ9H3L0 296 aaPredicted RBP21.9■■□□□ 1.1
PTPN18-202ENST00000347849 ANLNQ9NQW6 1124 aa21.9■■□□□ 1.1
PTPN18-202ENST00000347849 TMLHEQ9NVH6 421 aa21.9■■□□□ 1.1
PTPN18-202ENST00000347849 TCRBV9S1A1TA0A576 114 aa21.89■■□□□ 1.1
PTPN18-202ENST00000347849 AVILO75366 819 aa21.89■■□□□ 1.1
PTPN18-202ENST00000347849 LHX1P48742 406 aa21.89■■□□□ 1.1
PTPN18-202ENST00000347849 PCSK9Q8NBP7 692 aaKnown RBP21.89■■□□□ 1.1
PTPN18-202ENST00000347849 FBXO27Q8NI29 283 aa21.89■■□□□ 1.1
PTPN18-202ENST00000347849 H3BRJ5 948 aa21.89■■□□□ 1.09
PTPN18-202ENST00000347849 I6L893 689 aaPredicted RBP21.89■■□□□ 1.09
PTPN18-202ENST00000347849 USP17L7P0C7H9 530 aa21.89■■□□□ 1.09
PTPN18-202ENST00000347849 TGM2P21980 687 aa21.89■■□□□ 1.09
PTPN18-202ENST00000347849 STIP1P31948 543 aaKnown RBP21.89■■□□□ 1.09
PTPN18-202ENST00000347849 SERPINB4P48594 390 aa21.89■■□□□ 1.09
PTPN18-202ENST00000347849 YWHAGP61981 247 aaKnown RBP eCLIP21.89■■□□□ 1.09
PTPN18-202ENST00000347849 SH2D5Q6ZV89 423 aa21.89■■□□□ 1.09
PTPN18-202ENST00000347849 STRADAQ7RTN6 431 aa21.89■■□□□ 1.09
PTPN18-202ENST00000347849 KBTBD2Q8IY47 623 aa21.89■■□□□ 1.09
PTPN18-202ENST00000347849 TMEM86AQ8N2M4 240 aa21.89■■□□□ 1.09
PTPN18-202ENST00000347849 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.89■■□□□ 1.09
PTPN18-202ENST00000347849 NT5C3BQ969T7 300 aa21.89■■□□□ 1.09
PTPN18-202ENST00000347849 NPY6RQ99463 290 aa21.89■■□□□ 1.09
PTPN18-202ENST00000347849 PHACTR1Q9C0D0 580 aa21.89■■□□□ 1.09
PTPN18-202ENST00000347849 PIGVQ9NUD9 493 aa21.89■■□□□ 1.09
PTPN18-202ENST00000347849 ZNF212Q9UDV6 495 aa21.89■■□□□ 1.09
PTPN18-202ENST00000347849 USP3Q9Y6I4 520 aa21.89■■□□□ 1.09
PTPN18-202ENST00000347849 M0QYT0 321 aa21.88■■□□□ 1.09
PTPN18-202ENST00000347849 DAB1O75553 588 aa21.88■■□□□ 1.09
PTPN18-202ENST00000347849 FAM155BO75949 473 aa21.88■■□□□ 1.09
PTPN18-202ENST00000347849 ENO1P06733 434 aaKnown RBP21.88■■□□□ 1.09
PTPN18-202ENST00000347849 POLE2P56282 527 aa21.88■■□□□ 1.09
PTPN18-202ENST00000347849 SLC18A2Q05940 514 aa21.88■■□□□ 1.09
PTPN18-202ENST00000347849 CDHR3Q6ZTQ4 885 aa21.88■■□□□ 1.09
PTPN18-202ENST00000347849 GALNT15Q8N3T1 639 aa21.88■■□□□ 1.09
PTPN18-202ENST00000347849 CCDC110Q8TBZ0 833 aa21.88■■□□□ 1.09
PTPN18-202ENST00000347849 ARHGEF4Q9NR80 690 aa21.88■■□□□ 1.09
PTPN18-202ENST00000347849 FZD10Q9ULW2 581 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms