RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 KCNT2Q6UVM3 1135 aa18.25■□□□□ 0.51
VHL-202ENST00000345392 TRIM74Q86UV6 250 aa18.25■□□□□ 0.51
VHL-202ENST00000345392 TRIM73Q86UV7 250 aa18.25■□□□□ 0.51
VHL-202ENST00000345392 LILRA2Q8N149 483 aa18.25■□□□□ 0.51
VHL-202ENST00000345392 PLD6Q8N2A8 252 aaKnown RBP18.25■□□□□ 0.51
VHL-202ENST00000345392 ADAM32Q8TC27 787 aa18.25■□□□□ 0.51
VHL-202ENST00000345392 ACMSDQ8TDX5 336 aa18.25■□□□□ 0.51
VHL-202ENST00000345392 WDR55Q9H6Y2 383 aaPredicted RBP18.25■□□□□ 0.51
VHL-202ENST00000345392 PARP14Q460N5 1801 aa18.24■□□□□ 0.51
VHL-202ENST00000345392 SPDYE16A6NNV3 312 aaPredicted RBP18.24■□□□□ 0.51
VHL-202ENST00000345392 HSPA4LO95757 839 aa18.24■□□□□ 0.51
VHL-202ENST00000345392 AMHP03971 560 aa18.24■□□□□ 0.51
VHL-202ENST00000345392 NFICP08651 508 aa18.24■□□□□ 0.51
VHL-202ENST00000345392 CDK4P11802 303 aa18.24■□□□□ 0.51
VHL-202ENST00000345392 MGAT1P26572 445 aa18.24■□□□□ 0.51
VHL-202ENST00000345392 HARS2P49590 506 aaKnown RBP18.24■□□□□ 0.51
VHL-202ENST00000345392 ATXN1P54253 815 aaKnown RBP18.24■□□□□ 0.51
VHL-202ENST00000345392 CDKL1Q00532 357 aa18.24■□□□□ 0.51
VHL-202ENST00000345392 FLOT2Q14254 428 aa18.24■□□□□ 0.51
VHL-202ENST00000345392 DBN1Q16643 649 aa18.24■□□□□ 0.51
VHL-202ENST00000345392 BOLA3Q53S33 107 aa18.24■□□□□ 0.51
VHL-202ENST00000345392 FSCBQ5H9T9 825 aa18.24■□□□□ 0.51
VHL-202ENST00000345392 C1orf127Q8N9H9 656 aa18.24■□□□□ 0.51
VHL-202ENST00000345392 KCNN1Q92952 543 aa18.24■□□□□ 0.51
VHL-202ENST00000345392 MRPL1Q9BYD6 325 aaKnown RBP18.24■□□□□ 0.51
VHL-202ENST00000345392 CEP41Q9BYV8 373 aa18.24■□□□□ 0.51
VHL-202ENST00000345392 Q9H521 79 aa18.24■□□□□ 0.51
VHL-202ENST00000345392 STK39Q9UEW8 545 aa18.24■□□□□ 0.51
VHL-202ENST00000345392 MFHAS1Q9Y4C4 1052 aa18.24■□□□□ 0.51
VHL-202ENST00000345392 RLFQ13129 1914 aa18.24■□□□□ 0.51
VHL-202ENST00000345392 H3BSA7 217 aa18.24■□□□□ 0.51
VHL-202ENST00000345392 CILPO75339 1184 aa18.24■□□□□ 0.51
VHL-202ENST00000345392 ITGB3P05106 788 aa18.24■□□□□ 0.51
VHL-202ENST00000345392 TPSB2P20231 275 aa18.24■□□□□ 0.51
VHL-202ENST00000345392 TPSAB1Q15661 275 aa18.24■□□□□ 0.51
VHL-202ENST00000345392 STXBP2Q15833 593 aa18.24■□□□□ 0.51
VHL-202ENST00000345392 RARS2Q5T160 578 aaKnown RBP18.24■□□□□ 0.51
VHL-202ENST00000345392 EPGNQ6UW88 154 aa18.24■□□□□ 0.51
VHL-202ENST00000345392 SNX32Q86XE0 403 aa18.24■□□□□ 0.51
VHL-202ENST00000345392 C12orf29Q8N999 325 aa18.24■□□□□ 0.51
VHL-202ENST00000345392 CEP70Q8NHQ1 597 aa18.24■□□□□ 0.51
VHL-202ENST00000345392 CDKL2Q92772 493 aa18.24■□□□□ 0.51
VHL-202ENST00000345392 NIFKQ9BYG3 293 aaKnown RBP18.24■□□□□ 0.51
VHL-202ENST00000345392 GCATO75600 419 aa18.23■□□□□ 0.51
VHL-202ENST00000345392 MLH1P40692 756 aa18.23■□□□□ 0.51
VHL-202ENST00000345392 ABCG1P45844 678 aa18.23■□□□□ 0.51
VHL-202ENST00000345392 GMPSP49915 693 aaPredicted RBP18.23■□□□□ 0.51
VHL-202ENST00000345392 GTF2A2P52657 109 aa18.23■□□□□ 0.51
VHL-202ENST00000345392 MS4A2Q01362 244 aa18.23■□□□□ 0.51
VHL-202ENST00000345392 PDK1Q15118 436 aa18.23■□□□□ 0.51
VHL-202ENST00000345392 LY6KQ17RY6 165 aa18.23■□□□□ 0.51
VHL-202ENST00000345392 EEF1DP3Q658K8 133 aa18.23■□□□□ 0.51
VHL-202ENST00000345392 CDKL3Q8IVW4 592 aaPredicted RBP18.23■□□□□ 0.51
VHL-202ENST00000345392 ABTB1Q969K4 478 aaPredicted RBP18.23■□□□□ 0.51
VHL-202ENST00000345392 MRPS26Q9BYN8 205 aaKnown RBP18.23■□□□□ 0.51
VHL-202ENST00000345392 CDH19Q9H159 772 aa18.23■□□□□ 0.51
VHL-202ENST00000345392 FAM96AQ9H5X1 160 aa18.23■□□□□ 0.51
VHL-202ENST00000345392 A0A0J9YVX5 310 aa18.23■□□□□ 0.51
VHL-202ENST00000345392 ALDH1A2O94788 518 aa18.23■□□□□ 0.51
VHL-202ENST00000345392 TNFAIP8O95379 198 aa18.23■□□□□ 0.51
VHL-202ENST00000345392 SH2D4BQ5SQS7 431 aa18.23■□□□□ 0.51
VHL-202ENST00000345392 AMIGO2Q86SJ2 522 aa18.23■□□□□ 0.51
VHL-202ENST00000345392 DSELQ8IZU8 1212 aa18.23■□□□□ 0.51
VHL-202ENST00000345392 RAB26Q9ULW5 256 aa18.23■□□□□ 0.51
VHL-202ENST00000345392 PHIPQ8WWQ0 1821 aa18.22■□□□□ 0.51
VHL-202ENST00000345392 STX16-NPEPL1H3BU86 382 aa18.22■□□□□ 0.51
VHL-202ENST00000345392 STRNO43815 780 aa18.22■□□□□ 0.51
VHL-202ENST00000345392 ACAT1P24752 427 aaKnown RBP18.22■□□□□ 0.51
VHL-202ENST00000345392 SLC5A2P31639 672 aa18.22■□□□□ 0.51
VHL-202ENST00000345392 LAMTOR4Q0VGL1 99 aa18.22■□□□□ 0.51
VHL-202ENST00000345392 ADGRE1Q14246 886 aa18.22■□□□□ 0.51
VHL-202ENST00000345392 SURF1Q15526 300 aa18.22■□□□□ 0.51
VHL-202ENST00000345392 SCUBE3Q8IX30 993 aa18.22■□□□□ 0.51
VHL-202ENST00000345392 PKP2Q99959 881 aa18.22■□□□□ 0.51
VHL-202ENST00000345392 DHX35Q9H5Z1 703 aaKnown RBP18.22■□□□□ 0.51
VHL-202ENST00000345392 MTMR10Q9NXD2 777 aa18.22■□□□□ 0.51
VHL-202ENST00000345392 RIMS3Q9UJD0 308 aa18.22■□□□□ 0.51
VHL-202ENST00000345392 TSPAN16Q9UKR8 245 aa18.22■□□□□ 0.51
VHL-202ENST00000345392 HEMK1Q9Y5R4 338 aaPredicted RBP18.22■□□□□ 0.51
VHL-202ENST00000345392 TCN1P20061 433 aaPredicted RBP18.22■□□□□ 0.51
VHL-202ENST00000345392 GALK1P51570 392 aa18.22■□□□□ 0.51
VHL-202ENST00000345392 STAT5BP51692 787 aa18.22■□□□□ 0.51
VHL-202ENST00000345392 TARBP2Q15633 366 aaKnown RBP18.22■□□□□ 0.51
VHL-202ENST00000345392 HEATR6Q6AI08 1181 aaKnown RBP18.22■□□□□ 0.51
VHL-202ENST00000345392 HACE1Q8IYU2 909 aa18.22■□□□□ 0.51
VHL-202ENST00000345392 BHLHE22Q8NFJ8 381 aaPredicted RBP18.22■□□□□ 0.51
VHL-202ENST00000345392 ARNTL2Q8WYA1 636 aa18.22■□□□□ 0.51
VHL-202ENST00000345392 TCF7L2Q9NQB0 619 aa18.22■□□□□ 0.51
VHL-202ENST00000345392 TXNDC16Q9P2K2 825 aa18.22■□□□□ 0.51
VHL-202ENST00000345392 DMTF1Q9Y222 760 aa18.22■□□□□ 0.51
VHL-202ENST00000345392 PCDHB12Q9Y5F1 795 aa18.22■□□□□ 0.51
VHL-202ENST00000345392 NOP56O00567 594 aaKnown RBP18.21■□□□□ 0.51
VHL-202ENST00000345392 B4GALT4O60513 344 aa18.21■□□□□ 0.51
VHL-202ENST00000345392 FARP2O94887 1054 aaPredicted RBP18.21■□□□□ 0.51
VHL-202ENST00000345392 MX2P20592 715 aa18.21■□□□□ 0.51
VHL-202ENST00000345392 PIK3R1P27986 724 aa18.21■□□□□ 0.51
VHL-202ENST00000345392 EPHA3P29320 983 aa18.21■□□□□ 0.51
VHL-202ENST00000345392 CCR10P46092 362 aa18.21■□□□□ 0.51
VHL-202ENST00000345392 EFNA5P52803 228 aa18.21■□□□□ 0.51
VHL-202ENST00000345392 OLIG2Q13516 323 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms