RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 CACUL1Q86Y37 369 aa14.94□□□□□ -0.02
HMGN3-202ENST00000344726 XYLT1Q86Y38 959 aa14.94□□□□□ -0.02
HMGN3-202ENST00000344726 SYT12Q8IV01 421 aa14.94□□□□□ -0.02
HMGN3-202ENST00000344726 MFN1Q8IWA4 741 aa14.94□□□□□ -0.02
HMGN3-202ENST00000344726 LGI2Q8N0V4 545 aa14.94□□□□□ -0.02
HMGN3-202ENST00000344726 AHI1Q8N157 1196 aa14.94□□□□□ -0.02
HMGN3-202ENST00000344726 ZNF397Q8NF99 534 aaPredicted RBP14.94□□□□□ -0.02
HMGN3-202ENST00000344726 FIBINQ8TAL6 211 aa14.94□□□□□ -0.02
HMGN3-202ENST00000344726 BTN2A3PQ96KV6 586 aa14.94□□□□□ -0.02
HMGN3-202ENST00000344726 PRMT1Q99873 361 aaKnown RBP14.94□□□□□ -0.02
HMGN3-202ENST00000344726 DDX50Q9BQ39 737 aaKnown RBP14.94□□□□□ -0.02
HMGN3-202ENST00000344726 PDCL3Q9H2J4 239 aa14.94□□□□□ -0.02
HMGN3-202ENST00000344726 TMEM245Q9H330 911 aa14.94□□□□□ -0.02
HMGN3-202ENST00000344726 SYNCQ9H7C4 482 aa14.94□□□□□ -0.02
HMGN3-202ENST00000344726 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.94□□□□□ -0.02
HMGN3-202ENST00000344726 USP36Q9P275 1121 aaKnown RBP14.94□□□□□ -0.02
HMGN3-202ENST00000344726 EVLQ9UI08 416 aaPredicted RBP14.94□□□□□ -0.02
HMGN3-202ENST00000344726 INTS6Q9UL03 887 aaKnown RBP14.94□□□□□ -0.02
HMGN3-202ENST00000344726 CEP83Q9Y592 693 aa14.94□□□□□ -0.02
HMGN3-202ENST00000344726 TIMM44O43615 452 aa14.93□□□□□ -0.02
HMGN3-202ENST00000344726 ZNF217O75362 1048 aa14.93□□□□□ -0.02
HMGN3-202ENST00000344726 EPHX1P07099 455 aa14.93□□□□□ -0.02
HMGN3-202ENST00000344726 TPM2P07951 284 aa14.93□□□□□ -0.02
HMGN3-202ENST00000344726 NOS2P35228 1153 aa14.93□□□□□ -0.02
HMGN3-202ENST00000344726 SOX5P35711 763 aa14.93□□□□□ -0.02
HMGN3-202ENST00000344726 NOMO3P69849 1222 aa14.93□□□□□ -0.02
HMGN3-202ENST00000344726 ZNF33AQ06730 810 aa14.93□□□□□ -0.02
HMGN3-202ENST00000344726 STARD3Q14849 445 aa14.93□□□□□ -0.02
HMGN3-202ENST00000344726 TRNP1Q6NT89 227 aa14.93□□□□□ -0.02
HMGN3-202ENST00000344726 CAVIN1Q6NZI2 390 aaKnown RBP14.93□□□□□ -0.02
HMGN3-202ENST00000344726 SERPINA13PQ6UXR4 307 aa14.93□□□□□ -0.02
HMGN3-202ENST00000344726 SLC36A4Q6YBV0 504 aa14.93□□□□□ -0.02
HMGN3-202ENST00000344726 CHSY1Q86X52 802 aa14.93□□□□□ -0.02
HMGN3-202ENST00000344726 ZDHHC17Q8IUH5 632 aa14.93□□□□□ -0.02
HMGN3-202ENST00000344726 CARNMT1Q8N4J0 409 aa14.93□□□□□ -0.02
HMGN3-202ENST00000344726 ATP6V0D2Q8N8Y2 350 aa14.93□□□□□ -0.02
HMGN3-202ENST00000344726 CPA5Q8WXQ8 436 aa14.93□□□□□ -0.02
HMGN3-202ENST00000344726 C18orf8Q96DM3 657 aa14.93□□□□□ -0.02
HMGN3-202ENST00000344726 MYO19Q96H55 970 aa14.93□□□□□ -0.02
HMGN3-202ENST00000344726 HSPA12BQ96MM6 686 aa14.93□□□□□ -0.02
HMGN3-202ENST00000344726 PRDM16Q9HAZ2 1276 aa14.93□□□□□ -0.02
HMGN3-202ENST00000344726 ANLNQ9NQW6 1124 aa14.93□□□□□ -0.02
HMGN3-202ENST00000344726 KNL1Q8NG31 2342 aa14.93□□□□□ -0.02
HMGN3-202ENST00000344726 I6L893 689 aaPredicted RBP14.92□□□□□ -0.02
HMGN3-202ENST00000344726 GIPC1O14908 333 aa14.92□□□□□ -0.02
HMGN3-202ENST00000344726 LUC7L3O95232 432 aaKnown RBP14.92□□□□□ -0.02
HMGN3-202ENST00000344726 KCNK5O95279 499 aa14.92□□□□□ -0.02
HMGN3-202ENST00000344726 LSM8O95777 96 aaKnown RBP14.92□□□□□ -0.02
HMGN3-202ENST00000344726 ENGP17813 658 aa14.92□□□□□ -0.02
HMGN3-202ENST00000344726 CDK11BP21127 795 aaKnown RBP14.92□□□□□ -0.02
HMGN3-202ENST00000344726 MATKP42679 507 aa14.92□□□□□ -0.02
HMGN3-202ENST00000344726 IRAK1P51617 712 aa14.92□□□□□ -0.02
HMGN3-202ENST00000344726 SNX16P57768 344 aa14.92□□□□□ -0.02
HMGN3-202ENST00000344726 RNASE9P60153 205 aaKnown RBP14.92□□□□□ -0.02
HMGN3-202ENST00000344726 FMO1Q01740 532 aa14.92□□□□□ -0.02
HMGN3-202ENST00000344726 CDR2Q01850 454 aa14.92□□□□□ -0.02
HMGN3-202ENST00000344726 ARID5AQ03989 594 aa14.92□□□□□ -0.02
HMGN3-202ENST00000344726 UBXN1Q04323 297 aa14.92□□□□□ -0.02
HMGN3-202ENST00000344726 NME3Q13232 169 aa14.92□□□□□ -0.02
HMGN3-202ENST00000344726 FNDC3BQ53EP0 1204 aaKnown RBP14.92□□□□□ -0.02
HMGN3-202ENST00000344726 N4BP2L1Q5TBK1 243 aaPredicted RBP14.92□□□□□ -0.02
HMGN3-202ENST00000344726 NAA35Q5VZE5 725 aa14.92□□□□□ -0.02
HMGN3-202ENST00000344726 SLC23A3Q6PIS1 610 aa14.92□□□□□ -0.02
HMGN3-202ENST00000344726 METTL3Q86U44 580 aaKnown RBP14.92□□□□□ -0.02
HMGN3-202ENST00000344726 ERICH1Q86X53 443 aa14.92□□□□□ -0.02
HMGN3-202ENST00000344726 CIR1Q86X95 450 aaPredicted RBP14.92□□□□□ -0.02
HMGN3-202ENST00000344726 TMPRSS6Q8IU80 811 aa14.92□□□□□ -0.02
HMGN3-202ENST00000344726 DHX40Q8IX18 779 aaKnown RBP14.92□□□□□ -0.02
HMGN3-202ENST00000344726 NT5C3BQ969T7 300 aa14.92□□□□□ -0.02
HMGN3-202ENST00000344726 TTC17Q96AE7 1141 aa14.92□□□□□ -0.02
HMGN3-202ENST00000344726 ZNF419Q96HQ0 510 aaPredicted RBP14.92□□□□□ -0.02
HMGN3-202ENST00000344726 ERGIC2Q96RQ1 377 aa14.92□□□□□ -0.02
HMGN3-202ENST00000344726 NPY6RQ99463 290 aa14.92□□□□□ -0.02
HMGN3-202ENST00000344726 MTG2Q9H4K7 406 aa14.92□□□□□ -0.02
HMGN3-202ENST00000344726 ITM2CQ9NQX7 267 aa14.92□□□□□ -0.02
HMGN3-202ENST00000344726 PIGVQ9NUD9 493 aa14.92□□□□□ -0.02
HMGN3-202ENST00000344726 WSB2Q9NYS7 404 aaPredicted RBP14.92□□□□□ -0.02
HMGN3-202ENST00000344726 TYW5A2RUC4 315 aaKnown RBP14.91□□□□□ -0.02
HMGN3-202ENST00000344726 M0QYT0 321 aa14.91□□□□□ -0.02
HMGN3-202ENST00000344726 TEX33O43247 280 aa14.91□□□□□ -0.02
HMGN3-202ENST00000344726 SYNCRIPO60506 623 aaKnown RBP14.91□□□□□ -0.02
HMGN3-202ENST00000344726 CYP1A1P04798 512 aaPredicted RBP14.91□□□□□ -0.02
HMGN3-202ENST00000344726 DLDP09622 509 aaKnown RBP14.91□□□□□ -0.02
HMGN3-202ENST00000344726 POLR2EP19388 210 aaKnown RBP14.91□□□□□ -0.02
HMGN3-202ENST00000344726 MAOBP27338 520 aa14.91□□□□□ -0.02
HMGN3-202ENST00000344726 CD6P30203 668 aa14.91□□□□□ -0.02
HMGN3-202ENST00000344726 CCR1P32246 355 aa14.91□□□□□ -0.02
HMGN3-202ENST00000344726 FLT3P36888 993 aa14.91□□□□□ -0.02
HMGN3-202ENST00000344726 SCNN1AP37088 669 aa14.91□□□□□ -0.02
HMGN3-202ENST00000344726 GGCXP38435 758 aa14.91□□□□□ -0.02
HMGN3-202ENST00000344726 CSKP41240 450 aa14.91□□□□□ -0.02
HMGN3-202ENST00000344726 CTSOP43234 321 aaPredicted RBP14.91□□□□□ -0.02
HMGN3-202ENST00000344726 TPMTP51580 245 aa14.91□□□□□ -0.02
HMGN3-202ENST00000344726 CAMK2GQ13555 558 aaPredicted RBP14.91□□□□□ -0.02
HMGN3-202ENST00000344726 FAM102AQ5T9C2 384 aaPredicted RBP14.91□□□□□ -0.02
HMGN3-202ENST00000344726 FBXL22Q6P050 247 aa14.91□□□□□ -0.02
HMGN3-202ENST00000344726 ZNF677Q86XU0 584 aa14.91□□□□□ -0.02
HMGN3-202ENST00000344726 ANKRD20A12PQ8NF67 263 aa14.91□□□□□ -0.02
HMGN3-202ENST00000344726 RNF34Q969K3 372 aa14.91□□□□□ -0.02
HMGN3-202ENST00000344726 IGSF8Q969P0 613 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms