RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 ZNF165P49910 485 aa16.61■□□□□ 0.25
ATG4B-201ENST00000344376 KLHL40Q2TBA0 621 aa16.61■□□□□ 0.25
ATG4B-201ENST00000344376 FILIP1LQ4L180 1135 aa16.61■□□□□ 0.25
ATG4B-201ENST00000344376 ARMCX6Q7L4S7 300 aa16.61■□□□□ 0.25
ATG4B-201ENST00000344376 APTXQ7Z2E3 356 aaKnown RBP16.61■□□□□ 0.25
ATG4B-201ENST00000344376 METTL3Q86U44 580 aaKnown RBP16.61■□□□□ 0.25
ATG4B-201ENST00000344376 TMPRSS6Q8IU80 811 aa16.61■□□□□ 0.25
ATG4B-201ENST00000344376 PIGKQ92643 395 aa16.61■□□□□ 0.25
ATG4B-201ENST00000344376 MYEOVQ96EZ4 313 aa16.61■□□□□ 0.25
ATG4B-201ENST00000344376 RPRD1AQ96P16 312 aaPredicted RBP16.61■□□□□ 0.25
ATG4B-201ENST00000344376 NPY6RQ99463 290 aa16.61■□□□□ 0.25
ATG4B-201ENST00000344376 SLC6A17Q9H1V8 727 aa16.61■□□□□ 0.25
ATG4B-201ENST00000344376 FBRSQ9HAH7 460 aa16.61■□□□□ 0.25
ATG4B-201ENST00000344376 A0A1B0GVM2 712 aa16.6■□□□□ 0.25
ATG4B-201ENST00000344376 FAM170AA1A519 330 aa16.6■□□□□ 0.25
ATG4B-201ENST00000344376 TCAF2A6NFQ2 919 aa16.6■□□□□ 0.25
ATG4B-201ENST00000344376 CYP1A1P04798 512 aaPredicted RBP16.6■□□□□ 0.25
ATG4B-201ENST00000344376 CCDC172P0C7W6 258 aa16.6■□□□□ 0.25
ATG4B-201ENST00000344376 HLA-EP13747 358 aa16.6■□□□□ 0.25
ATG4B-201ENST00000344376 CSKP41240 450 aa16.6■□□□□ 0.25
ATG4B-201ENST00000344376 OXCT1P55809 520 aa16.6■□□□□ 0.25
ATG4B-201ENST00000344376 FOXK2Q01167 660 aa16.6■□□□□ 0.25
ATG4B-201ENST00000344376 FMO1Q01740 532 aa16.6■□□□□ 0.25
ATG4B-201ENST00000344376 DEUP1Q05D60 604 aa16.6■□□□□ 0.25
ATG4B-201ENST00000344376 SLC25A52Q3SY17 297 aa16.6■□□□□ 0.25
ATG4B-201ENST00000344376 BRMS1LQ5PSV4 323 aa16.6■□□□□ 0.25
ATG4B-201ENST00000344376 RNF219Q5W0B1 726 aaPredicted RBP16.6■□□□□ 0.25
ATG4B-201ENST00000344376 MMS22LQ6ZRQ5 1243 aa16.6■□□□□ 0.25
ATG4B-201ENST00000344376 DHX40Q8IX18 779 aaKnown RBP16.6■□□□□ 0.25
ATG4B-201ENST00000344376 OR2T3Q8NH03 318 aa16.6■□□□□ 0.25
ATG4B-201ENST00000344376 TTC17Q96AE7 1141 aa16.6■□□□□ 0.25
ATG4B-201ENST00000344376 PRMT1Q99873 361 aaKnown RBP16.6■□□□□ 0.25
ATG4B-201ENST00000344376 MKRN2Q9H000 416 aaKnown RBP16.6■□□□□ 0.25
ATG4B-201ENST00000344376 TMEM245Q9H330 911 aa16.6■□□□□ 0.25
ATG4B-201ENST00000344376 SMOC1Q9H4F8 434 aa16.6■□□□□ 0.25
ATG4B-201ENST00000344376 WDCPQ9H6R7 721 aa16.6■□□□□ 0.25
ATG4B-201ENST00000344376 PIGVQ9NUD9 493 aa16.6■□□□□ 0.25
ATG4B-201ENST00000344376 SUN2Q9UH99 717 aa16.6■□□□□ 0.25
ATG4B-201ENST00000344376 SLC30A4O14863 429 aa16.6■□□□□ 0.25
ATG4B-201ENST00000344376 KHNYNO15037 678 aaKnown RBP16.6■□□□□ 0.25
ATG4B-201ENST00000344376 PTGER3P43115 390 aa16.6■□□□□ 0.25
ATG4B-201ENST00000344376 NSFP46459 744 aaKnown RBP16.6■□□□□ 0.25
ATG4B-201ENST00000344376 CAMK2GQ13555 558 aaPredicted RBP16.6■□□□□ 0.25
ATG4B-201ENST00000344376 SLC12A1Q13621 1099 aa16.6■□□□□ 0.25
ATG4B-201ENST00000344376 NFKBIBQ15653 356 aa16.6■□□□□ 0.25
ATG4B-201ENST00000344376 PTPRNQ16849 979 aa16.6■□□□□ 0.25
ATG4B-201ENST00000344376 C2CD6Q53TS8 623 aa16.6■□□□□ 0.25
ATG4B-201ENST00000344376 PITRM1Q5JRX3 1037 aa16.6■□□□□ 0.25
ATG4B-201ENST00000344376 ACBD5Q5T8D3 534 aaPredicted RBP16.6■□□□□ 0.25
ATG4B-201ENST00000344376 SYT12Q8IV01 421 aa16.6■□□□□ 0.25
ATG4B-201ENST00000344376 PGAP3Q96FM1 320 aaPredicted RBP16.6■□□□□ 0.25
ATG4B-201ENST00000344376 LMLNQ96KR4 655 aa16.6■□□□□ 0.25
ATG4B-201ENST00000344376 PPP1R9BQ96SB3 815 aa16.6■□□□□ 0.25
ATG4B-201ENST00000344376 SEPT11Q9NVA2 429 aaKnown RBP16.6■□□□□ 0.25
ATG4B-201ENST00000344376 DMXL1Q9Y485 3027 aa16.59■□□□□ 0.25
ATG4B-201ENST00000344376 GDF9O60383 454 aa16.59■□□□□ 0.25
ATG4B-201ENST00000344376 PAGE1O75459 146 aa16.59■□□□□ 0.25
ATG4B-201ENST00000344376 CHRNB2P17787 502 aa16.59■□□□□ 0.25
ATG4B-201ENST00000344376 MMP8P22894 467 aa16.59■□□□□ 0.25
ATG4B-201ENST00000344376 CD6P30203 668 aa16.59■□□□□ 0.25
ATG4B-201ENST00000344376 OXTRP30559 389 aa16.59■□□□□ 0.25
ATG4B-201ENST00000344376 HOXD12P35452 270 aa16.59■□□□□ 0.25
ATG4B-201ENST00000344376 CXCR3P49682 368 aa16.59■□□□□ 0.25
ATG4B-201ENST00000344376 COPAP53621 1224 aa16.59■□□□□ 0.25
ATG4B-201ENST00000344376 LIMK1P53667 647 aa16.59■□□□□ 0.25
ATG4B-201ENST00000344376 ATXN1P54253 815 aaKnown RBP16.59■□□□□ 0.25
ATG4B-201ENST00000344376 TPM4P67936 248 aa16.59■□□□□ 0.25
ATG4B-201ENST00000344376 AUHQ13825 339 aaKnown RBP16.59■□□□□ 0.25
ATG4B-201ENST00000344376 FSCBQ5H9T9 825 aa16.59■□□□□ 0.25
ATG4B-201ENST00000344376 OTUD1Q5VV17 481 aaPredicted RBP16.59■□□□□ 0.25
ATG4B-201ENST00000344376 IL31Q6EBC2 164 aa16.59■□□□□ 0.25
ATG4B-201ENST00000344376 TCEAL6Q6IPX3 200 aa16.59■□□□□ 0.25
ATG4B-201ENST00000344376 FBXL22Q6P050 247 aa16.59■□□□□ 0.25
ATG4B-201ENST00000344376 ARCQ7LC44 396 aa16.59■□□□□ 0.25
ATG4B-201ENST00000344376 RABEPKQ7Z6M1 372 aa16.59■□□□□ 0.25
ATG4B-201ENST00000344376 CCAR2Q8N163 923 aaKnown RBP16.59■□□□□ 0.25
ATG4B-201ENST00000344376 ZNF366Q8N895 744 aa16.59■□□□□ 0.25
ATG4B-201ENST00000344376 KDM1BQ8NB78 822 aa16.59■□□□□ 0.25
ATG4B-201ENST00000344376 TCEAL3Q969E4 200 aa16.59■□□□□ 0.25
ATG4B-201ENST00000344376 NT5C3BQ969T7 300 aa16.59■□□□□ 0.25
ATG4B-201ENST00000344376 TBCBQ99426 244 aa16.59■□□□□ 0.25
ATG4B-201ENST00000344376 C11orf70Q9BRQ4 267 aa16.59■□□□□ 0.25
ATG4B-201ENST00000344376 TKTL2Q9H0I9 626 aa16.59■□□□□ 0.25
ATG4B-201ENST00000344376 ARHGEF38Q9NXL2 777 aa16.59■□□□□ 0.25
ATG4B-201ENST00000344376 USP36Q9P275 1121 aaKnown RBP16.59■□□□□ 0.25
ATG4B-201ENST00000344376 VANGL2Q9ULK5 521 aa16.59■□□□□ 0.25
ATG4B-201ENST00000344376 HS3ST4Q9Y661 456 aa16.59■□□□□ 0.25
ATG4B-201ENST00000344376 CEP250Q9BV73 2442 aa16.59■□□□□ 0.25
ATG4B-201ENST00000344376 SDK1Q7Z5N4 2213 aa16.58■□□□□ 0.24
ATG4B-201ENST00000344376 FERP16591 822 aa16.58■□□□□ 0.24
ATG4B-201ENST00000344376 RDXP35241 583 aaKnown RBP16.58■□□□□ 0.24
ATG4B-201ENST00000344376 FLT3P36888 993 aa16.58■□□□□ 0.24
ATG4B-201ENST00000344376 ZNF33AQ06730 810 aa16.58■□□□□ 0.24
ATG4B-201ENST00000344376 PLEKHG6Q3KR16 790 aa16.58■□□□□ 0.24
ATG4B-201ENST00000344376 CIR1Q86X95 450 aaPredicted RBP16.58■□□□□ 0.24
ATG4B-201ENST00000344376 CACUL1Q86Y37 369 aa16.58■□□□□ 0.24
ATG4B-201ENST00000344376 FOXJ1Q92949 421 aa16.58■□□□□ 0.24
ATG4B-201ENST00000344376 EDEM2Q9BV94 578 aa16.58■□□□□ 0.24
ATG4B-201ENST00000344376 SIK2Q9H0K1 926 aa16.58■□□□□ 0.24
ATG4B-201ENST00000344376 RTN4Q9NQC3 1192 aaKnown RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms