RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 ENDOVQ8N8Q3 282 aaKnown RBP7.59□□□□□ -1.19
ZNF540-202ENST00000343599 TRAPPC12Q8WVT3 735 aa7.59□□□□□ -1.19
ZNF540-202ENST00000343599 TCHPQ9BT92 498 aa7.59□□□□□ -1.19
ZNF540-202ENST00000343599 EIF2AQ9BY44 585 aaKnown RBP7.59□□□□□ -1.19
ZNF540-202ENST00000343599 PLA2G2FQ9BZM2 168 aa7.59□□□□□ -1.19
ZNF540-202ENST00000343599 ELOVL4Q9GZR5 314 aa7.59□□□□□ -1.19
ZNF540-202ENST00000343599 CYP3A43Q9HB55 503 aa7.59□□□□□ -1.19
ZNF540-202ENST00000343599 ITM2CQ9NQX7 267 aa7.59□□□□□ -1.19
ZNF540-202ENST00000343599 TBCCD1Q9NVR7 557 aa7.59□□□□□ -1.19
ZNF540-202ENST00000343599 STIM2Q9P246 746 aa7.59□□□□□ -1.19
ZNF540-202ENST00000343599 CTTNBP2NLQ9P2B4 639 aa7.59□□□□□ -1.19
ZNF540-202ENST00000343599 LNPEPQ9UIQ6 1025 aa7.59□□□□□ -1.19
ZNF540-202ENST00000343599 INPP5FQ9Y2H2 1132 aa7.59□□□□□ -1.19
ZNF540-202ENST00000343599 TTLL3Q9Y4R7 772 aa7.59□□□□□ -1.19
ZNF540-202ENST00000343599 PLXNA2O75051 1894 aa7.59□□□□□ -1.19
ZNF540-202ENST00000343599 WNT7AO00755 349 aa7.59□□□□□ -1.19
ZNF540-202ENST00000343599 OPHN1O60890 802 aa7.59□□□□□ -1.19
ZNF540-202ENST00000343599 SRGAP2O75044 1071 aa7.59□□□□□ -1.19
ZNF540-202ENST00000343599 HNRNPCP07910 306 aaKnown RBP eCLIP7.59□□□□□ -1.19
ZNF540-202ENST00000343599 CFHP08603 1231 aa7.59□□□□□ -1.19
ZNF540-202ENST00000343599 HOXC4P09017 264 aaPredicted RBP7.59□□□□□ -1.19
ZNF540-202ENST00000343599 CALB2P22676 271 aa7.59□□□□□ -1.19
ZNF540-202ENST00000343599 CCT6AP40227 531 aaKnown RBP7.59□□□□□ -1.19
ZNF540-202ENST00000343599 KIR2DL1P43626 348 aaPredicted RBP7.59□□□□□ -1.19
ZNF540-202ENST00000343599 TAF6P49848 677 aa7.59□□□□□ -1.19
ZNF540-202ENST00000343599 CLCN2P51788 898 aa7.59□□□□□ -1.19
ZNF540-202ENST00000343599 PLK1P53350 603 aa7.59□□□□□ -1.19
ZNF540-202ENST00000343599 GUCY1B3Q02153 619 aa7.59□□□□□ -1.19
ZNF540-202ENST00000343599 C2orf54Q08AI8 447 aa7.59□□□□□ -1.19
ZNF540-202ENST00000343599 P3H1Q32P28 736 aa7.59□□□□□ -1.19
ZNF540-202ENST00000343599 INTS6LQ5JSJ4 861 aaKnown RBP7.59□□□□□ -1.19
ZNF540-202ENST00000343599 CFAP157Q5JU67 520 aa7.59□□□□□ -1.19
ZNF540-202ENST00000343599 TRPM8Q7Z2W7 1104 aa7.59□□□□□ -1.19
ZNF540-202ENST00000343599 LINC00301Q8NCQ3 95 aa7.59□□□□□ -1.19
ZNF540-202ENST00000343599 OR6C4Q8NGE1 309 aa7.59□□□□□ -1.19
ZNF540-202ENST00000343599 ZSCAN18Q8TBC5 510 aaPredicted RBP7.59□□□□□ -1.19
ZNF540-202ENST00000343599 KCNG4Q8TDN1 519 aa7.59□□□□□ -1.19
ZNF540-202ENST00000343599 FBF1Q8TES7 1133 aa7.59□□□□□ -1.19
ZNF540-202ENST00000343599 CLIP3Q96DZ5 547 aa7.59□□□□□ -1.19
ZNF540-202ENST00000343599 CHMP6Q96FZ7 201 aa7.59□□□□□ -1.19
ZNF540-202ENST00000343599 DHTKD1Q96HY7 919 aaPredicted RBP7.59□□□□□ -1.19
ZNF540-202ENST00000343599 CATSPER2Q96P56 530 aa7.59□□□□□ -1.19
ZNF540-202ENST00000343599 LRRC1Q9BTT6 524 aa7.59□□□□□ -1.19
ZNF540-202ENST00000343599 OSBPL10Q9BXB5 764 aa7.59□□□□□ -1.19
ZNF540-202ENST00000343599 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.59□□□□□ -1.19
ZNF540-202ENST00000343599 HAUS4Q9H6D7 363 aa7.59□□□□□ -1.19
ZNF540-202ENST00000343599 OLA1Q9NTK5 396 aaKnown RBP7.59□□□□□ -1.19
ZNF540-202ENST00000343599 UBAP1Q9NZ09 502 aa7.59□□□□□ -1.19
ZNF540-202ENST00000343599 LARSQ9P2J5 1176 aaKnown RBP7.59□□□□□ -1.19
ZNF540-202ENST00000343599 MTUS1Q9ULD2 1270 aa7.59□□□□□ -1.19
ZNF540-202ENST00000343599 CA14Q9ULX7 337 aa7.59□□□□□ -1.19
ZNF540-202ENST00000343599 TIMM22Q9Y584 194 aa7.59□□□□□ -1.19
ZNF540-202ENST00000343599 PCDHGA8Q9Y5G5 932 aa7.59□□□□□ -1.19
ZNF540-202ENST00000343599 DNMT3AQ9Y6K1 912 aaPredicted RBP7.59□□□□□ -1.19
ZNF540-202ENST00000343599 CACNA1AO00555 2505 aa7.59□□□□□ -1.2
ZNF540-202ENST00000343599 YEATS4O95619 227 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 SRPRAP08240 638 aaKnown RBP7.58□□□□□ -1.2
ZNF540-202ENST00000343599 KRT16P08779 473 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 GNSP15586 552 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 CMA1P23946 247 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 TEAD1P28347 426 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 MAPK8P45983 427 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 GEMIN4P57678 1058 aaKnown RBP7.58□□□□□ -1.2
ZNF540-202ENST00000343599 HPCAP84074 193 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 C19orf57Q0VDD7 668 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 AGERQ15109 404 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 C21orf62-AS1Q17RA5 79 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 ZNF362Q5T0B9 420 aaPredicted RBP7.58□□□□□ -1.2
ZNF540-202ENST00000343599 TAS1R1Q7RTX1 841 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 CPLX4Q7Z7G2 160 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 TMEFF1Q8IYR6 380 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 C1orf216Q8TAB5 229 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 ITFG1Q8TB96 612 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 IGSF8Q969P0 613 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 PLD4Q96BZ4 506 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 IQCDQ96DY2 449 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 HIC2Q96JB3 615 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 CGREF1Q99674 301 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 RAB17Q9H0T7 212 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 RNPEPL1Q9HAU8 725 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 USP18Q9UMW8 372 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 TBC1D30Q9Y2I9 924 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 A8MUI8 341 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 ARHGAP33O14559 1287 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 AKR1B10O60218 316 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 APODP05090 189 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 ITGA2BP08514 1039 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 PORP16435 677 aaPredicted RBP7.58□□□□□ -1.2
ZNF540-202ENST00000343599 ACO1P21399 889 aaKnown RBP7.58□□□□□ -1.2
ZNF540-202ENST00000343599 SLC12A3P55017 1021 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 STRN3Q13033 797 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 EIF3IQ13347 325 aaKnown RBP7.58□□□□□ -1.2
ZNF540-202ENST00000343599 C5orf22Q49AR2 442 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 WDR44Q5JSH3 913 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 C9orf57Q5W0N0 161 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 TMC5Q6UXY8 1006 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 APTXQ7Z2E3 356 aaKnown RBP7.58□□□□□ -1.2
ZNF540-202ENST00000343599 WDR49Q8IV35 697 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 MRPS31Q92665 395 aaKnown RBP7.58□□□□□ -1.2
ZNF540-202ENST00000343599 DYDC2Q96IM9 177 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms