RNA–Protein interactions for RNA: ENST00000343256.9

MUC1-204, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-204ENST00000343256 HNRNPA1L2Q32P51 320 aaKnown RBP18.41■□□□□ 0.54
MUC1-204ENST00000343256 C3orf38Q5JPI3 329 aa18.41■□□□□ 0.54
MUC1-204ENST00000343256 C9orf64Q5T6V5 341 aa18.41■□□□□ 0.54
MUC1-204ENST00000343256 TBC1D3GQ6DHY5 549 aa18.41■□□□□ 0.54
MUC1-204ENST00000343256 TBC1D3CQ6IPX1 549 aa18.41■□□□□ 0.54
MUC1-204ENST00000343256 NAPEPLDQ6IQ20 393 aa18.41■□□□□ 0.54
MUC1-204ENST00000343256 SND1Q7KZF4 910 aaKnown RBP eCLIP18.41■□□□□ 0.542e-6■□□□□ 8.2
MUC1-204ENST00000343256 TBC1D3Q8IZP1 549 aaPredicted RBP18.41■□□□□ 0.54
MUC1-204ENST00000343256 UCKL1Q9NWZ5 548 aa18.41■□□□□ 0.54
MUC1-204ENST00000343256 SMC3Q9UQE7 1217 aa18.41■□□□□ 0.54
MUC1-204ENST00000343256 CA5BQ9Y2D0 317 aa18.41■□□□□ 0.54
MUC1-204ENST00000343256 SSUH2Q9Y2M2 353 aa18.41■□□□□ 0.54
MUC1-204ENST00000343256 DOCK9Q9BZ29 2069 aa18.41■□□□□ 0.54
MUC1-204ENST00000343256 GOLGA6L7A0A1B0GV03 622 aa18.4■□□□□ 0.54
MUC1-204ENST00000343256 TERTO14746 1132 aaKnown RBP18.4■□□□□ 0.54
MUC1-204ENST00000343256 ASS1P00966 412 aaKnown RBP18.4■□□□□ 0.54
MUC1-204ENST00000343256 TRIM21P19474 475 aaKnown RBP18.4■□□□□ 0.54
MUC1-204ENST00000343256 CLDN10P78369 228 aa18.4■□□□□ 0.54
MUC1-204ENST00000343256 INCA1Q0VD86 236 aa18.4■□□□□ 0.54
MUC1-204ENST00000343256 FAM173BQ6P4H8 233 aa18.4■□□□□ 0.54
MUC1-204ENST00000343256 RFWD3Q6PCD5 774 aa18.4■□□□□ 0.54
MUC1-204ENST00000343256 ARHGAP18Q8N392 663 aa18.4■□□□□ 0.54
MUC1-204ENST00000343256 MRGPRX3Q96LB0 322 aa18.4■□□□□ 0.54
MUC1-204ENST00000343256 SATB2Q9UPW6 733 aa18.4■□□□□ 0.54
MUC1-204ENST00000343256 TDRD6O60522 2096 aaKnown RBP18.4■□□□□ 0.54
MUC1-204ENST00000343256 A0A1W2PNU3 283 aaPredicted RBP18.39■□□□□ 0.53
MUC1-204ENST00000343256 TTC34A8MYJ7 566 aa18.39■□□□□ 0.53
MUC1-204ENST00000343256 MSI1O43347 362 aaKnown RBP18.39■□□□□ 0.53
MUC1-204ENST00000343256 LATO43561 262 aa18.39■□□□□ 0.53
MUC1-204ENST00000343256 EIF5BO60841 1220 aaKnown RBP18.39■□□□□ 0.53
MUC1-204ENST00000343256 GOT1P17174 413 aa18.39■□□□□ 0.53
MUC1-204ENST00000343256 CSKP41240 450 aa18.39■□□□□ 0.53
MUC1-204ENST00000343256 SNRPFP62306 86 aaKnown RBP18.39■□□□□ 0.53
MUC1-204ENST00000343256 POM121L1PQ3SYA9 428 aa18.39■□□□□ 0.53
MUC1-204ENST00000343256 ZACNQ401N2 412 aa18.39■□□□□ 0.53
MUC1-204ENST00000343256 ZNF394Q53GI3 561 aa18.39■□□□□ 0.53
MUC1-204ENST00000343256 ADGRF1Q5T601 910 aa18.39■□□□□ 0.53
MUC1-204ENST00000343256 CCDC81Q6ZN84 652 aa18.39■□□□□ 0.53
MUC1-204ENST00000343256 C12orf56Q8IXR9 622 aa18.39■□□□□ 0.53
MUC1-204ENST00000343256 FAM129BQ96TA1 746 aa18.39■□□□□ 0.53
MUC1-204ENST00000343256 TNMDQ9H2S6 317 aa18.39■□□□□ 0.53
MUC1-204ENST00000343256 APOBEC3GQ9HC16 384 aaKnown RBP18.39■□□□□ 0.53
MUC1-204ENST00000343256 STIM2Q9P246 746 aa18.39■□□□□ 0.53
MUC1-204ENST00000343256 ARHGAP20Q9P2F6 1191 aa18.39■□□□□ 0.53
MUC1-204ENST00000343256 STOML2Q9UJZ1 356 aa18.39■□□□□ 0.53
MUC1-204ENST00000343256 INTS6Q9UL03 887 aaKnown RBP18.39■□□□□ 0.53
MUC1-204ENST00000343256 UBE4BO95155 1302 aa18.39■□□□□ 0.53
MUC1-204ENST00000343256 UBR5O95071 2799 aaPredicted RBP18.38■□□□□ 0.53
MUC1-204ENST00000343256 NYNRINQ9P2P1 1898 aaKnown RBP18.38■□□□□ 0.53
MUC1-204ENST00000343256 HLA-DRAP01903 254 aa18.38■□□□□ 0.53
MUC1-204ENST00000343256 RPN1P04843 607 aaKnown RBP18.38■□□□□ 0.53
MUC1-204ENST00000343256 DGKAP23743 735 aa18.38■□□□□ 0.53
MUC1-204ENST00000343256 PIK3CAP42336 1068 aa18.38■□□□□ 0.53
MUC1-204ENST00000343256 CTSOP43234 321 aaPredicted RBP18.38■□□□□ 0.53
MUC1-204ENST00000343256 METAP1P53582 386 aa18.38■□□□□ 0.53
MUC1-204ENST00000343256 ZNF445P59923 1031 aa18.38■□□□□ 0.53
MUC1-204ENST00000343256 ZSCAN23Q3MJ62 389 aa18.38■□□□□ 0.53
MUC1-204ENST00000343256 HS1BP3Q53T59 392 aa18.38■□□□□ 0.53
MUC1-204ENST00000343256 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.38■□□□□ 0.53
MUC1-204ENST00000343256 SV2AQ7L0J3 742 aa18.38■□□□□ 0.53
MUC1-204ENST00000343256 PRPF39Q86UA1 669 aaKnown RBP18.38■□□□□ 0.53
MUC1-204ENST00000343256 PIGZQ86VD9 579 aa18.38■□□□□ 0.53
MUC1-204ENST00000343256 STK40Q8N2I9 435 aa18.38■□□□□ 0.53
MUC1-204ENST00000343256 OR4C6Q8NH72 309 aa18.38■□□□□ 0.53
MUC1-204ENST00000343256 EDEM1Q92611 657 aa18.38■□□□□ 0.53
MUC1-204ENST00000343256 TAF4BQ92750 862 aa18.38■□□□□ 0.53
MUC1-204ENST00000343256 TTC17Q96AE7 1141 aa18.38■□□□□ 0.53
MUC1-204ENST00000343256 LMLNQ96KR4 655 aa18.38■□□□□ 0.53
MUC1-204ENST00000343256 ULBP1Q9BZM6 244 aa18.38■□□□□ 0.53
MUC1-204ENST00000343256 SLC39A2Q9NP94 309 aa18.38■□□□□ 0.53
MUC1-204ENST00000343256 KBTBD4Q9NVX7 518 aa18.38■□□□□ 0.53
MUC1-204ENST00000343256 WDR70Q9NW82 654 aa18.38■□□□□ 0.53
MUC1-204ENST00000343256 TFIP11Q9UBB9 837 aaKnown RBP18.38■□□□□ 0.53
MUC1-204ENST00000343256 PMS2P1A4D2B8 440 aa18.37■□□□□ 0.53
MUC1-204ENST00000343256 VPS37CA5D8V6 355 aaPredicted RBP18.37■□□□□ 0.53
MUC1-204ENST00000343256 CD2BP2O95400 341 aaKnown RBP18.37■□□□□ 0.53
MUC1-204ENST00000343256 CKMT1AP12532 417 aa18.37■□□□□ 0.53
MUC1-204ENST00000343256 CASP1P29466 404 aa18.37■□□□□ 0.53
MUC1-204ENST00000343256 RBMS1P29558 406 aaKnown RBP18.37■□□□□ 0.53
MUC1-204ENST00000343256 SLC6A4P31645 630 aa18.37■□□□□ 0.53
MUC1-204ENST00000343256 TKTL1P51854 596 aa18.37■□□□□ 0.53
MUC1-204ENST00000343256 STAT4Q14765 748 aa18.37■□□□□ 0.53
MUC1-204ENST00000343256 LINC00303Q3SY05 128 aa18.37■□□□□ 0.53
MUC1-204ENST00000343256 RAB41Q5JT25 222 aa18.37■□□□□ 0.53
MUC1-204ENST00000343256 PIK3R6Q5UE93 754 aa18.37■□□□□ 0.53
MUC1-204ENST00000343256 MMS22LQ6ZRQ5 1243 aa18.37■□□□□ 0.53
MUC1-204ENST00000343256 BHLHA9Q7RTU4 235 aa18.37■□□□□ 0.53
MUC1-204ENST00000343256 MFN1Q8IWA4 741 aa18.37■□□□□ 0.53
MUC1-204ENST00000343256 ABCG4Q9H172 646 aa18.37■□□□□ 0.53
MUC1-204ENST00000343256 HBS1LQ9Y450 684 aaKnown RBP18.37■□□□□ 0.53
MUC1-204ENST00000343256 MAGEC1O60732 1142 aa18.36■□□□□ 0.53
MUC1-204ENST00000343256 IL1BP01584 269 aa18.36■□□□□ 0.53
MUC1-204ENST00000343256 CENPBP07199 599 aaPredicted RBP18.36■□□□□ 0.53
MUC1-204ENST00000343256 GIMD1P0DJR0 217 aa18.36■□□□□ 0.53
MUC1-204ENST00000343256 C5AR1P21730 350 aa18.36■□□□□ 0.53
MUC1-204ENST00000343256 DRD3P35462 400 aa18.36■□□□□ 0.53
MUC1-204ENST00000343256 NUMBP49757 651 aa18.36■□□□□ 0.53
MUC1-204ENST00000343256 SKOR1P84550 965 aa18.36■□□□□ 0.53
MUC1-204ENST00000343256 FOXR1Q6PIV2 292 aa18.36■□□□□ 0.53
MUC1-204ENST00000343256 IQCHQ86VS3 1027 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms