RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 RBM44Q6ZP01 1051 aaKnown RBP12.71□□□□□ -0.38
SNRNP48-201ENST00000342415 KCTD4Q8WVF5 259 aa12.71□□□□□ -0.38
SNRNP48-201ENST00000342415 C7orf43Q8WVR3 580 aa12.71□□□□□ -0.38
SNRNP48-201ENST00000342415 ZNF333Q96JL9 665 aa12.71□□□□□ -0.38
SNRNP48-201ENST00000342415 TBCBQ99426 244 aa12.71□□□□□ -0.38
SNRNP48-201ENST00000342415 GOLGA2P5Q9HBQ8 144 aa12.71□□□□□ -0.38
SNRNP48-201ENST00000342415 NUP188Q5SRE5 1749 aa12.71□□□□□ -0.38
SNRNP48-201ENST00000342415 SIN3BO75182 1162 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 B3GAT3O94766 335 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 PARNO95453 639 aaKnown RBP12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 CCNB1P14635 433 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 ACADSBP45954 432 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 PPIDQ08752 370 aaKnown RBP12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 BST2Q10589 180 aaKnown RBP12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 STX5Q13190 355 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 MAPRE2Q15555 327 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 CERCAMQ5T4B2 595 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 CDHR3Q6ZTQ4 885 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 TFAP2DQ7Z6R9 452 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 MIB1Q86YT6 1006 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 ADGRF2Q8IZF7 708 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 NAT8LQ8N9F0 302 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 EMID1Q96A84 441 aaPredicted RBP12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 SLC7A6OSQ96CW6 309 aaPredicted RBP12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 MOCOSQ96EN8 888 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 NRBF2Q96F24 287 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 DNAJC1Q96KC8 554 aaKnown RBP12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 WDR41Q9HAD4 459 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 GPAMQ9HCL2 828 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 PDGFCQ9NRA1 345 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 SNX15Q9NRS6 342 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 NCKIPSDQ9NZQ3 722 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 TMEM216Q9P0N5 145 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 A0A0A0MRY4 1105 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 ASB14A6NK59 587 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 ERI2A8K979 691 aaKnown RBP12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 GPR25O00155 361 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 PGAM1P18669 254 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 NFKBIAP25963 317 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 SP2Q02086 613 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 PTP4A2Q12974 167 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 OLIG2Q13516 323 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 CAPRIN1Q14444 709 aaKnown RBP12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 C16orf72Q14CZ0 275 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 TAS2R42Q7RTR8 314 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 CCDC117Q8IWD4 279 aaPredicted RBP12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 SLCO2A1Q92959 643 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 BHMTQ93088 406 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 P2RY11Q96G91 374 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 SPATA13Q96N96 652 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 TUBGCP5Q96RT8 1024 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 NDNQ99608 321 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 NPAS2Q99743 824 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 NTPCRQ9BSD7 190 aaKnown RBP12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 EML4Q9HC35 981 aaKnown RBP12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 KIAA1257Q9ULG3 409 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 MYO18AQ92614 2054 aaKnown RBP12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 E5RI56 91 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 BAIAP3O94812 1187 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 MPSTP25325 297 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 RBBP7Q16576 425 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 SLC5A9Q2M3M2 681 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 FRA10AC1Q70Z53 315 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 LPCAT2Q7L5N7 544 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 TDRPQ86YL5 185 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 BBS5Q8N3I7 341 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 URGCPQ8TCY9 931 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 DCAKDQ8WVC6 231 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 LENG8Q96PV6 779 aaPredicted RBP12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 MRPL45Q9BRJ2 306 aaKnown RBP12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 TMEM134Q9H6X4 195 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 ETAA1Q9NY74 926 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 C9JVG2 144 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 UBDO15205 165 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 ITM2AO43736 263 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 MAFO75444 373 aaPredicted RBP12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 CNTFP26441 200 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 GRIA4P48058 902 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 AQP4P55087 323 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 NOTUMQ6P988 496 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 C4orf22Q6V702 233 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 PCYOX1LQ8NBM8 494 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 ZNF483Q8TF39 744 aaPredicted RBP12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 CLEC4CQ8WTT0 213 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 MFSD3Q96ES6 412 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 EGFL8Q99944 293 aa12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 ACE2Q9BYF1 805 aaPredicted RBP12.7□□□□□ -0.38
SNRNP48-201ENST00000342415 ZNF142P52746 1687 aaPredicted RBP12.69□□□□□ -0.38
SNRNP48-201ENST00000342415 SUPT3HB4E1H0 165 aa12.69□□□□□ -0.38
SNRNP48-201ENST00000342415 HNRNPRO43390 633 aaKnown RBP12.69□□□□□ -0.38
SNRNP48-201ENST00000342415 DDHD2O94830 711 aa12.69□□□□□ -0.38
SNRNP48-201ENST00000342415 USP17L7P0C7H9 530 aa12.69□□□□□ -0.38
SNRNP48-201ENST00000342415 ZNF23P17027 643 aa12.69□□□□□ -0.38
SNRNP48-201ENST00000342415 CCNFP41002 786 aa12.69□□□□□ -0.38
SNRNP48-201ENST00000342415 CSE1LP55060 971 aaKnown RBP12.69□□□□□ -0.38
SNRNP48-201ENST00000342415 KLF1Q13351 362 aaPredicted RBP12.69□□□□□ -0.38
SNRNP48-201ENST00000342415 GALNTL6Q49A17 601 aa12.69□□□□□ -0.38
SNRNP48-201ENST00000342415 RAB6CQ53S08 254 aa12.69□□□□□ -0.38
SNRNP48-201ENST00000342415 TEDDM1Q5T9Z0 273 aa12.69□□□□□ -0.38
SNRNP48-201ENST00000342415 MOB2Q70IA6 237 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms