RNA–Protein interactions for RNA: ENST00000340480.8

HIPK1-201, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 6,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-201ENST00000340480 PTPRJQ12913 1337 aa7.8□□□□□ -1.16
HIPK1-201ENST00000340480 DNAJC6O75061 913 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 FLT3P36888 993 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 FAM83EQ2M2I3 478 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 RFX8Q6ZV50 586 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 ANKS1BQ7Z6G8 1248 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 PARP9Q8IXQ6 854 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 KCTD13Q8WZ19 329 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 ERP27Q96DN0 273 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 EGFL8Q99944 293 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 KLC4Q9NSK0 619 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 ZDHHC18Q9NUE0 388 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 TUBGCP4Q9UGJ1 667 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 HES2Q9Y543 173 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 JCHAINP01591 159 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 URODP06132 367 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 MAP4P27816 1152 aaKnown RBP7.79□□□□□ -1.16
HIPK1-201ENST00000340480 GABRB2P47870 512 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 CSE1LP55060 971 aaKnown RBP7.79□□□□□ -1.16
HIPK1-201ENST00000340480 LILRA4P59901 499 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 MPP3Q13368 585 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 SLC24A5Q71RS6 500 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 RELL1Q8IUW5 271 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 OR9Q1Q8NGQ5 310 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 ZFP42Q96MM3 310 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 ASPSCR1Q9BZE9 553 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 UPF3AQ9H1J1 476 aaKnown RBP7.79□□□□□ -1.16
HIPK1-201ENST00000340480 EIF2B3Q9NR50 452 aaKnown RBP7.79□□□□□ -1.16
HIPK1-201ENST00000340480 SORCS3Q9UPU3 1222 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 TREHO43280 583 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 EOMESO95936 686 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 LRG1P02750 347 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 RALBP11234 206 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 LRPAP1P30533 357 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 ADRA1BP35368 520 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 CLNS1AP54105 237 aaKnown RBP7.79□□□□□ -1.16
HIPK1-201ENST00000340480 ATP13A4Q4VNC1 1196 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 LCA5Q86VQ0 697 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 IFNL1Q8IU54 200 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 TRIM48Q8IWZ4 208 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 FUBP3Q96I24 572 aaKnown RBP eCLIP7.79□□□□□ -1.166e-7■■■■□ 24.5
HIPK1-201ENST00000340480 QKIQ96PU8 341 aaKnown RBP eCLIP7.79□□□□□ -1.163e-8■■■■■ 28.2
HIPK1-201ENST00000340480 PTPRHQ9HD43 1115 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 GIMAP4Q9NUV9 329 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.79□□□□□ -1.16
HIPK1-201ENST00000340480 DYRK3O43781 588 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 POMCP01189 267 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 GCKP35557 465 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 NAA20P61599 178 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 OCRLQ01968 901 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 ZNF177Q13360 481 aaPredicted RBP7.79□□□□□ -1.16
HIPK1-201ENST00000340480 ARHGEF7Q14155 803 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 RNASEH2BQ5TBB1 312 aaKnown RBP7.79□□□□□ -1.16
HIPK1-201ENST00000340480 MARC1Q5VT66 337 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 PRCCQ92733 491 aaPredicted RBP7.79□□□□□ -1.16
HIPK1-201ENST00000340480 CMTM5Q96DZ9 223 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 EBNA1BP2Q99848 306 aaKnown RBP7.79□□□□□ -1.16
HIPK1-201ENST00000340480 RXFP1Q9HBX9 757 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 FAM50BQ9Y247 325 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 HEATR9A2RTY3 570 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 SYN3O14994 580 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 RBP1P09455 135 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 YBX3P16989 372 aaKnown RBP eCLIP7.79□□□□□ -1.164e-7■■■■□ 19.4
HIPK1-201ENST00000340480 NCF2P19878 526 aaPredicted RBP7.79□□□□□ -1.16
HIPK1-201ENST00000340480 ART3Q13508 389 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 PRAMEF19Q5SWL8 479 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 FAXCQ5TGI0 409 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 TAS2R42Q7RTR8 314 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 TRABD2AQ86V40 505 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 NCLNQ969V3 563 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 ELMO3Q96BJ8 720 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 RMDN1Q96DB5 314 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 CEP19Q96LK0 163 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 FAM111AQ96PZ2 611 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 C16orf70Q9BSU1 422 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 STARD13Q9Y3M8 1113 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 C5orf60A6NFR6 353 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 GOLGA8RI6L899 631 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 RNASEH1O60930 286 aaKnown RBP7.79□□□□□ -1.16
HIPK1-201ENST00000340480 CNMDO75829 334 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 SNAI1O95863 264 aaPredicted RBP7.79□□□□□ -1.16
HIPK1-201ENST00000340480 MYL4P12829 197 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 SLC18A1P54219 525 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 IFI35P80217 286 aaPredicted RBP7.79□□□□□ -1.16
HIPK1-201ENST00000340480 DEFB115Q30KQ5 88 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 FASTKD1Q53R41 847 aaKnown RBP7.79□□□□□ -1.16
HIPK1-201ENST00000340480 AGAP9Q5VTM2 703 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 MON1AQ86VX9 555 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 SLAIN1Q8ND83 568 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 MYLPFQ96A32 169 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 PPWD1Q96BP3 646 aaKnown RBP7.79□□□□□ -1.16
HIPK1-201ENST00000340480 GBP5Q96PP8 586 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 XYLT2Q9H1B5 865 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 SYTL2Q9HCH5 934 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 VPS45Q9NRW7 570 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 OR12D3Q9UGF7 316 aa7.79□□□□□ -1.16
HIPK1-201ENST00000340480 MAGED2Q9UNF1 606 aaPredicted RBP7.79□□□□□ -1.16
HIPK1-201ENST00000340480 R3HDM2Q9Y2K5 976 aaKnown RBP7.79□□□□□ -1.16
HIPK1-201ENST00000340480 QSER1Q2KHR3 1735 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 TRPC5OSA6NMA1 111 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms