RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 MARK1Q9P0L2 795 aa7.39□□□□□ -1.23
NUP43-201ENST00000340413 ZNF212Q9UDV6 495 aa7.39□□□□□ -1.23
NUP43-201ENST00000340413 ZNF148Q9UQR1 794 aa7.39□□□□□ -1.23
NUP43-201ENST00000340413 R3HDM2Q9Y2K5 976 aaKnown RBP7.39□□□□□ -1.23
NUP43-201ENST00000340413 TRAV19A0A0A6YYK7 116 aa7.38□□□□□ -1.23
NUP43-201ENST00000340413 TCRBV7S2A1N4TA0A589 114 aa7.38□□□□□ -1.23
NUP43-201ENST00000340413 E9PAM4 449 aa7.38□□□□□ -1.23
NUP43-201ENST00000340413 GRAP2O75791 330 aa7.38□□□□□ -1.23
NUP43-201ENST00000340413 USP46P62068 366 aa7.38□□□□□ -1.23
NUP43-201ENST00000340413 IL10RBQ08334 325 aa7.38□□□□□ -1.23
NUP43-201ENST00000340413 TWF1Q12792 350 aa7.38□□□□□ -1.23
NUP43-201ENST00000340413 KCNJ11Q14654 390 aa7.38□□□□□ -1.23
NUP43-201ENST00000340413 CA9Q16790 459 aa7.38□□□□□ -1.23
NUP43-201ENST00000340413 CDO1Q16878 200 aa7.38□□□□□ -1.23
NUP43-201ENST00000340413 ZC3H12AQ5D1E8 599 aaKnown RBP7.38□□□□□ -1.23
NUP43-201ENST00000340413 PPM1LQ5SGD2 360 aa7.38□□□□□ -1.23
NUP43-201ENST00000340413 SH3PXD2AQ5TCZ1 1133 aa7.38□□□□□ -1.23
NUP43-201ENST00000340413 PHLDB2Q86SQ0 1253 aa7.38□□□□□ -1.23
NUP43-201ENST00000340413 FAM131BQ86XD5 332 aa7.38□□□□□ -1.23
NUP43-201ENST00000340413 CCDC13Q8IYE1 715 aa7.38□□□□□ -1.23
NUP43-201ENST00000340413 NAT8LQ8N9F0 302 aa7.38□□□□□ -1.23
NUP43-201ENST00000340413 HTR3CQ8WXA8 447 aa7.38□□□□□ -1.23
NUP43-201ENST00000340413 IL12RB2Q99665 862 aa7.38□□□□□ -1.23
NUP43-201ENST00000340413 TCF25Q9BQ70 676 aa7.38□□□□□ -1.23
NUP43-201ENST00000340413 SLC2A11Q9BYW1 496 aa7.38□□□□□ -1.23
NUP43-201ENST00000340413 STMN4Q9H169 189 aaPredicted RBP7.38□□□□□ -1.23
NUP43-201ENST00000340413 MRM3Q9HC36 420 aaKnown RBP7.38□□□□□ -1.23
NUP43-201ENST00000340413 RIMKLBQ9ULI2 386 aa7.38□□□□□ -1.23
NUP43-201ENST00000340413 NR2E1Q9Y466 385 aa7.38□□□□□ -1.23
NUP43-201ENST00000340413 HS3ST4Q9Y661 456 aa7.38□□□□□ -1.23
NUP43-201ENST00000340413 ILVBLA1L0T0 632 aa7.38□□□□□ -1.23
NUP43-201ENST00000340413 ADAM12O43184 909 aa7.38□□□□□ -1.23
NUP43-201ENST00000340413 LUC7L3O95232 432 aaKnown RBP7.38□□□□□ -1.23
NUP43-201ENST00000340413 ERCC2P18074 760 aa7.38□□□□□ -1.23
NUP43-201ENST00000340413 GARSP41250 739 aaKnown RBP7.38□□□□□ -1.23
NUP43-201ENST00000340413 MAGEA3P43357 314 aa7.38□□□□□ -1.23
NUP43-201ENST00000340413 RPL21P46778 160 aaKnown RBP7.38□□□□□ -1.23
NUP43-201ENST00000340413 USP4Q13107 963 aa7.38□□□□□ -1.23
NUP43-201ENST00000340413 ATP13A4Q4VNC1 1196 aa7.38□□□□□ -1.23
NUP43-201ENST00000340413 MS4A13Q5J8X5 152 aa7.38□□□□□ -1.23
NUP43-201ENST00000340413 ZFYVE27Q5T4F4 411 aa7.38□□□□□ -1.23
NUP43-201ENST00000340413 HEATR6Q6AI08 1181 aaKnown RBP7.38□□□□□ -1.23
NUP43-201ENST00000340413 DARS2Q6PI48 645 aaKnown RBP7.38□□□□□ -1.23
NUP43-201ENST00000340413 TMC3Q7Z5M5 1100 aa7.38□□□□□ -1.23
NUP43-201ENST00000340413 TDRPQ86YL5 185 aa7.38□□□□□ -1.23
NUP43-201ENST00000340413 HJURPQ8NCD3 748 aaPredicted RBP7.38□□□□□ -1.23
NUP43-201ENST00000340413 VN1R2Q8NFZ6 395 aa7.38□□□□□ -1.23
NUP43-201ENST00000340413 POF1BQ8WVV4 589 aa7.38□□□□□ -1.23
NUP43-201ENST00000340413 PEX13Q92968 403 aa7.38□□□□□ -1.23
NUP43-201ENST00000340413 SRPK1Q96SB4 655 aaKnown RBP7.38□□□□□ -1.23
NUP43-201ENST00000340413 ENTPD7Q9NQZ7 604 aa7.38□□□□□ -1.23
NUP43-201ENST00000340413 ASAH2Q9NR71 780 aa7.38□□□□□ -1.23
NUP43-201ENST00000340413 TBC1D14Q9P2M4 693 aa7.38□□□□□ -1.23
NUP43-201ENST00000340413 ANAPC5Q9UJX4 755 aa7.38□□□□□ -1.23
NUP43-201ENST00000340413 ZMYND8Q9ULU4 1186 aaPredicted RBP7.38□□□□□ -1.23
NUP43-201ENST00000340413 TBC1D30Q9Y2I9 924 aa7.38□□□□□ -1.23
NUP43-201ENST00000340413 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.38□□□□□ -1.23
NUP43-201ENST00000340413 NT5C1B-RDH14C9J2C7 533 aa7.38□□□□□ -1.23
NUP43-201ENST00000340413 GOLGA8KD6RF30 607 aa7.38□□□□□ -1.23
NUP43-201ENST00000340413 SLC9A3R1O14745 358 aaPredicted RBP7.38□□□□□ -1.23
NUP43-201ENST00000340413 MATN3O15232 486 aa7.38□□□□□ -1.23
NUP43-201ENST00000340413 MYCP01106 439 aaPredicted RBP7.38□□□□□ -1.23
NUP43-201ENST00000340413 CSNK1DP48730 415 aa7.38□□□□□ -1.23
NUP43-201ENST00000340413 PRSS36Q5K4E3 855 aa7.38□□□□□ -1.23
NUP43-201ENST00000340413 C10orf120Q5SQS8 335 aa7.38□□□□□ -1.23
NUP43-201ENST00000340413 AGBL2Q5U5Z8 902 aa7.38□□□□□ -1.23
NUP43-201ENST00000340413 LINC00523Q86TU6 105 aa7.38□□□□□ -1.23
NUP43-201ENST00000340413 TADA1Q96BN2 335 aa7.38□□□□□ -1.23
NUP43-201ENST00000340413 PRKD2Q9BZL6 878 aa7.38□□□□□ -1.23
NUP43-201ENST00000340413 PABPC3Q9H361 631 aaKnown RBP7.38□□□□□ -1.23
NUP43-201ENST00000340413 TASP1Q9H6P5 420 aa7.38□□□□□ -1.23
NUP43-201ENST00000340413 VPS45Q9NRW7 570 aa7.38□□□□□ -1.23
NUP43-201ENST00000340413 CXXC1Q9P0U4 656 aaPredicted RBP7.38□□□□□ -1.23
NUP43-201ENST00000340413 KIAA1549LQ6ZVL6 1849 aa7.38□□□□□ -1.23
NUP43-201ENST00000340413 SRRM3A6NNA2 597 aaPredicted RBP7.37□□□□□ -1.23
NUP43-201ENST00000340413 F5H5T6 163 aa7.37□□□□□ -1.23
NUP43-201ENST00000340413 PI4K2BG5E9Z4 385 aa7.37□□□□□ -1.23
NUP43-201ENST00000340413 ALOX15BO15296 676 aa7.37□□□□□ -1.23
NUP43-201ENST00000340413 DAPK3O43293 454 aa7.37□□□□□ -1.23
NUP43-201ENST00000340413 LRIG2O94898 1065 aa7.37□□□□□ -1.23
NUP43-201ENST00000340413 KRT10P13645 584 aa7.37□□□□□ -1.23
NUP43-201ENST00000340413 GOT1P17174 413 aa7.37□□□□□ -1.23
NUP43-201ENST00000340413 HOXB8P17481 243 aaPredicted RBP7.37□□□□□ -1.23
NUP43-201ENST00000340413 TFE3P19532 575 aaPredicted RBP7.37□□□□□ -1.23
NUP43-201ENST00000340413 TACR2P21452 398 aa7.37□□□□□ -1.23
NUP43-201ENST00000340413 MAGEA10P43363 369 aaPredicted RBP7.37□□□□□ -1.23
NUP43-201ENST00000340413 MMP13P45452 471 aa7.37□□□□□ -1.23
NUP43-201ENST00000340413 ARL4CP56559 192 aa7.37□□□□□ -1.23
NUP43-201ENST00000340413 NME3Q13232 169 aa7.37□□□□□ -1.23
NUP43-201ENST00000340413 GPM6BQ13491 265 aa7.37□□□□□ -1.23
NUP43-201ENST00000340413 TAF12Q16514 161 aa7.37□□□□□ -1.23
NUP43-201ENST00000340413 C6orf118Q5T5N4 469 aa7.37□□□□□ -1.23
NUP43-201ENST00000340413 AADACL2Q6P093 401 aa7.37□□□□□ -1.23
NUP43-201ENST00000340413 TMC7Q7Z402 723 aa7.37□□□□□ -1.23
NUP43-201ENST00000340413 PLPP6Q8IY26 295 aa7.37□□□□□ -1.23
NUP43-201ENST00000340413 C1orf54Q8WWF1 131 aa7.37□□□□□ -1.23
NUP43-201ENST00000340413 PRCCQ92733 491 aaPredicted RBP7.37□□□□□ -1.23
NUP43-201ENST00000340413 MAGEB16A2A368 324 aa7.37□□□□□ -1.23
NUP43-201ENST00000340413 C8AP07357 584 aa7.37□□□□□ -1.23
NUP43-201ENST00000340413 IVLP07476 585 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms