RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 SPON2Q9BUD6 331 aa10.45□□□□□ -0.74
RBFOX1-202ENST00000340209 ZNF395Q9H8N7 513 aaPredicted RBP10.45□□□□□ -0.74
RBFOX1-202ENST00000340209 NDFIP2Q9NV92 336 aa10.45□□□□□ -0.74
RBFOX1-202ENST00000340209 PHTF1Q9UMS5 762 aa10.45□□□□□ -0.74
RBFOX1-202ENST00000340209 SHROOM3Q8TF72 1996 aa10.44□□□□□ -0.74
RBFOX1-202ENST00000340209 UBOX5O94941 541 aa10.44□□□□□ -0.74
RBFOX1-202ENST00000340209 FBXO21O94952 628 aa10.44□□□□□ -0.74
RBFOX1-202ENST00000340209 VEGFBP49765 207 aa10.44□□□□□ -0.74
RBFOX1-202ENST00000340209 TMPRSS15P98073 1019 aa10.44□□□□□ -0.74
RBFOX1-202ENST00000340209 FAXDC2Q96IV6 333 aa10.44□□□□□ -0.74
RBFOX1-202ENST00000340209 ZNF512Q96ME7 567 aaPredicted RBP10.44□□□□□ -0.74
RBFOX1-202ENST00000340209 FOXP3Q9BZS1 431 aa10.44□□□□□ -0.74
RBFOX1-202ENST00000340209 GRID1Q9ULK0 1009 aa10.44□□□□□ -0.74
RBFOX1-202ENST00000340209 SLC12A8A0AV02 714 aa10.44□□□□□ -0.74
RBFOX1-202ENST00000340209 CHADO15335 359 aa10.44□□□□□ -0.74
RBFOX1-202ENST00000340209 ZBTB17Q13105 803 aa10.44□□□□□ -0.74
RBFOX1-202ENST00000340209 HSP90AA5PQ58FG0 334 aa10.44□□□□□ -0.74
RBFOX1-202ENST00000340209 RAP1GAP2Q684P5 730 aa10.44□□□□□ -0.74
RBFOX1-202ENST00000340209 RAPH1Q70E73 1250 aa10.44□□□□□ -0.74
RBFOX1-202ENST00000340209 CMC1Q7Z7K0 106 aa10.44□□□□□ -0.74
RBFOX1-202ENST00000340209 RMDN2Q96LZ7 410 aa10.44□□□□□ -0.74
RBFOX1-202ENST00000340209 G3BP2Q9UN86 482 aaKnown RBP10.44□□□□□ -0.74
RBFOX1-202ENST00000340209 USP15Q9Y4E8 981 aaPredicted RBP10.44□□□□□ -0.74
RBFOX1-202ENST00000340209 XKR4Q5GH76 650 aa10.44□□□□□ -0.74
RBFOX1-202ENST00000340209 DCLRE1AQ6PJP8 1040 aa10.44□□□□□ -0.74
RBFOX1-202ENST00000340209 BZW1Q7L1Q6 419 aaKnown RBP10.44□□□□□ -0.74
RBFOX1-202ENST00000340209 LINC01599Q8WXQ3 324 aa10.44□□□□□ -0.74
RBFOX1-202ENST00000340209 ZNF317Q96PQ6 595 aaPredicted RBP10.44□□□□□ -0.74
RBFOX1-202ENST00000340209 ACBD6Q9BR61 282 aa10.44□□□□□ -0.74
RBFOX1-202ENST00000340209 FSD1LQ9BXM9 530 aa10.44□□□□□ -0.74
RBFOX1-202ENST00000340209 SHCBP1LQ9BZQ2 653 aa10.44□□□□□ -0.74
RBFOX1-202ENST00000340209 CAB39LQ9H9S4 337 aa10.44□□□□□ -0.74
RBFOX1-202ENST00000340209 CDY1Q9Y6F8 540 aa10.44□□□□□ -0.74
RBFOX1-202ENST00000340209 BCLAF3A2AJT9 711 aaKnown RBP10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 APOEP02649 317 aa10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 C14orf80Q86SX3 495 aa10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 CKAP2Q8WWK9 683 aa10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 ERP27Q96DN0 273 aa10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 MFSD3Q96ES6 412 aa10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 RPRD1AQ96P16 312 aaPredicted RBP10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 BAIAP2L1Q9UHR4 511 aa10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 PSAT1Q9Y617 370 aa10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 PIRTP0C851 137 aa10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 CXCR3P49682 368 aa10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 GSCP56915 257 aaPredicted RBP10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 PPM1JQ5JR12 505 aa10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 CHSY1Q86X52 802 aa10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 SPATA6LQ8N4H0 392 aa10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 FRMD8P1Q9BZ68 369 aaPredicted RBP10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 WDR6Q9NNW5 1121 aaKnown RBP10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 C20orf96Q9NUD7 363 aaPredicted RBP10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 TSR3Q9UJK0 312 aaKnown RBP10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 FBXW11Q9UKB1 542 aa10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 DNM1LO00429 736 aa10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 BNIP3LO60238 219 aa10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 ALDH2P05091 517 aa10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 ABHD2P08910 425 aa10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 TAC1P20366 129 aa10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 GLRBP48167 497 aa10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 TAF10Q12962 218 aa10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 RCN2Q14257 317 aa10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 RFWD3Q6PCD5 774 aa10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 TRPM8Q7Z2W7 1104 aa10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 SLC26A11Q86WA9 606 aa10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 KLHDC9Q8NEP7 349 aa10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 DCAKDQ8WVC6 231 aa10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 PPM1EQ8WY54 764 aa10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 TBC1D31Q96DN5 1066 aa10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 EXOC2Q96KP1 924 aa10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 SRPK1Q96SB4 655 aaKnown RBP10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 NCAPGQ9BPX3 1015 aa10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 FICDQ9BVA6 458 aa10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 TMEM109Q9BVC6 243 aa10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 TRPC7Q9HCX4 862 aa10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 NT5MQ9NPB1 228 aa10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 BFARQ9NZS9 450 aa10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 CPSF2Q9P2I0 782 aaKnown RBP10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 FIS1Q9Y3D6 152 aa10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 TEX264Q9Y6I9 313 aa10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 TSPAN3O60637 253 aa10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 PTPN3P26045 913 aa10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 CCR1P32246 355 aa10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 CHRNA4P43681 627 aa10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 RPL10AP62906 217 aaKnown RBP10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 TAZQ16635 292 aa10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 FYB2Q5VWT5 728 aa10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 TAS1R1Q7RTX1 841 aa10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 PDCD6IPQ8WUM4 868 aaKnown RBP10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 CDKL2Q92772 493 aa10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 TMEM237Q96Q45 408 aa10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 CHRAC1Q9NRG0 131 aa10.43□□□□□ -0.74
RBFOX1-202ENST00000340209 SDR42E2A6NKP2 422 aa10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 CCT8L1PA6NM43 557 aa10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 ZBBXA8MT70 800 aa10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 NDC80O14777 642 aa10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 SNX3O60493 162 aa10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 DNAJC6O75061 913 aa10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 KRT38O76015 456 aa10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 KCNA4P22459 653 aa10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 TARSP26639 723 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms