RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 CKMP06732 381 aa8.07□□□□□ -1.12
TMC1-202ENST00000340019 POU3F3P20264 500 aaPredicted RBP8.07□□□□□ -1.12
TMC1-202ENST00000340019 SLC6A4P31645 630 aa8.07□□□□□ -1.12
TMC1-202ENST00000340019 SLC11A2P49281 568 aa8.07□□□□□ -1.12
TMC1-202ENST00000340019 KCTD19Q17RG1 926 aaPredicted RBP8.07□□□□□ -1.12
TMC1-202ENST00000340019 GPR158Q5T848 1215 aa8.07□□□□□ -1.12
TMC1-202ENST00000340019 RAP1GAP2Q684P5 730 aa8.07□□□□□ -1.12
TMC1-202ENST00000340019 TMCO3Q6UWJ1 677 aa8.07□□□□□ -1.12
TMC1-202ENST00000340019 NLRP14Q86W24 1093 aa8.07□□□□□ -1.12
TMC1-202ENST00000340019 CCDC105Q8IYK2 499 aa8.07□□□□□ -1.12
TMC1-202ENST00000340019 IGSF8Q969P0 613 aa8.07□□□□□ -1.12
TMC1-202ENST00000340019 MYEOVQ96EZ4 313 aa8.07□□□□□ -1.12
TMC1-202ENST00000340019 PNKPQ96T60 521 aa8.07□□□□□ -1.12
TMC1-202ENST00000340019 PRDM12Q9H4Q4 367 aa8.07□□□□□ -1.12
TMC1-202ENST00000340019 ZNF212Q9UDV6 495 aa8.07□□□□□ -1.12
TMC1-202ENST00000340019 ZMYM5Q9UJ78 669 aa8.07□□□□□ -1.12
TMC1-202ENST00000340019 HEY1Q9Y5J3 304 aa8.07□□□□□ -1.12
TMC1-202ENST00000340019 FAM187AA6NFU0 413 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 GFRA2O00451 464 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 MCF2LO15068 1137 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 IRF1P10914 325 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 TACR2P21452 398 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 IRAK1P51617 712 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 EIF3EP60228 445 aaKnown RBP8.06□□□□□ -1.12
TMC1-202ENST00000340019 XRCC4Q13426 336 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 ADAM15Q13444 863 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 GRIN2CQ14957 1233 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 ARHGAP15Q53QZ3 475 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 CCDC70Q6NSX1 233 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 RWDD4Q6NW29 188 aaKnown RBP8.06□□□□□ -1.12
TMC1-202ENST00000340019 ANKRD54Q6NXT1 300 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 SYCE2Q6PIF2 218 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 HTR3DQ70Z44 454 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 GPR149Q86SP6 731 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 JAMLQ86YT9 394 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 FAM217AQ8IXS0 508 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 ALLCQ8N6M5 410 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 SEC14L1Q92503 715 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 ZYG11BQ9C0D3 744 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 CATSPERBQ9H7T0 1116 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 PIDD1Q9HB75 910 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 STIM2Q9P246 746 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 FEZ2Q9UHY8 353 aaPredicted RBP8.06□□□□□ -1.12
TMC1-202ENST00000340019 RAD54BQ9Y620 910 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 MTCH2Q9Y6C9 303 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 ZSCAN5CA6NGD5 496 aaPredicted RBP8.06□□□□□ -1.12
TMC1-202ENST00000340019 MAP3K6O95382 1288 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 ECEL1O95672 775 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 RBP3P10745 1247 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 CEBPBP17676 345 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 CTC1Q2NKJ3 1217 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 ALFQ53S48 1182 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 ADGRF1Q5T601 910 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 AFMIDQ63HM1 303 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 LRRC31Q6UY01 552 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 BZW1Q7L1Q6 419 aaKnown RBP8.06□□□□□ -1.12
TMC1-202ENST00000340019 RTL3Q8N8U3 475 aaKnown RBP8.06□□□□□ -1.12
TMC1-202ENST00000340019 ITFG1Q8TB96 612 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 GRK7Q8WTQ7 553 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 RUBCNQ92622 972 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 ZSWIM3Q96MP5 696 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 TMEM121Q9BTD3 319 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 SMG9Q9H0W8 520 aaKnown RBP8.06□□□□□ -1.12
TMC1-202ENST00000340019 GDF3Q9NR23 364 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 NDFIP2Q9NV92 336 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 TMEM248Q9NWD8 314 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 MPP6Q9NZW5 540 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 RAB21Q9UL25 225 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 CCL26Q9Y258 94 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 NYNRINQ9P2P1 1898 aaKnown RBP8.06□□□□□ -1.12
TMC1-202ENST00000340019 BCLAF3A2AJT9 711 aaKnown RBP8.06□□□□□ -1.12
TMC1-202ENST00000340019 F5H5T6 163 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 LEFTY2O00292 366 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 HEXIM1O94992 359 aaKnown RBP8.06□□□□□ -1.12
TMC1-202ENST00000340019 RHOQP17081 205 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 WEE1P30291 646 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 LMNB2Q03252 620 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 ADGRE1Q14246 886 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 COL19A1Q14993 1142 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 RARS2Q5T160 578 aaKnown RBP8.06□□□□□ -1.12
TMC1-202ENST00000340019 WDR93Q6P2C0 686 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 SYDE1Q6ZW31 735 aaPredicted RBP8.06□□□□□ -1.12
TMC1-202ENST00000340019 ZC3H18Q86VM9 953 aaKnown RBP8.06□□□□□ -1.12
TMC1-202ENST00000340019 CHSY1Q86X52 802 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 TP53INP2Q8IXH6 220 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 RIN3Q8TB24 985 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 USP13Q92995 863 aaPredicted RBP8.06□□□□□ -1.12
TMC1-202ENST00000340019 PRICKLE1Q96MT3 831 aaPredicted RBP8.06□□□□□ -1.12
TMC1-202ENST00000340019 ERP44Q9BS26 406 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 PARD6BQ9BYG5 372 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 USP29Q9HBJ7 922 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 CLEC1BQ9P126 229 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 ZNF148Q9UQR1 794 aa8.06□□□□□ -1.12
TMC1-202ENST00000340019 MRPS23Q9Y3D9 190 aaKnown RBP8.06□□□□□ -1.12
TMC1-202ENST00000340019 SOX1O00570 391 aaPredicted RBP8.05□□□□□ -1.12
TMC1-202ENST00000340019 CNTN5O94779 1100 aa8.05□□□□□ -1.12
TMC1-202ENST00000340019 TCF3P15923 654 aa8.05□□□□□ -1.12
TMC1-202ENST00000340019 HOXB8P17481 243 aaPredicted RBP8.05□□□□□ -1.12
TMC1-202ENST00000340019 SERPINB6P35237 376 aa8.05□□□□□ -1.12
TMC1-202ENST00000340019 AVPR1AP37288 418 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms