RNA–Protein interactions for RNA: ENST00000339717.11

BRPF3-201, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5 BASIC

Gene BRPF3, Length 4,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-201ENST00000339717 PAQR5Q9NXK6 330 aaPredicted RBP12.9□□□□□ -0.35
BRPF3-201ENST00000339717 HESX1Q9UBX0 185 aa12.9□□□□□ -0.35
BRPF3-201ENST00000339717 PRG3Q9Y2Y8 225 aaPredicted RBP12.9□□□□□ -0.35
BRPF3-201ENST00000339717 FAM240BA0A1B0GVZ2 78 aa12.89□□□□□ -0.35
BRPF3-201ENST00000339717 ATP6V1G2-DDX39BF2Z307 99 aa12.89□□□□□ -0.35
BRPF3-201ENST00000339717 HMGN1P05114 100 aa12.89□□□□□ -0.35
BRPF3-201ENST00000339717 C6orf222P0C671 652 aaPredicted RBP12.89□□□□□ -0.35
BRPF3-201ENST00000339717 RPL17P18621 184 aaKnown RBP12.89□□□□□ -0.35
BRPF3-201ENST00000339717 TNNI1P19237 187 aa12.89□□□□□ -0.35
BRPF3-201ENST00000339717 NMT1P30419 496 aaKnown RBP12.89□□□□□ -0.35
BRPF3-201ENST00000339717 TNK2Q07912 1038 aa12.89□□□□□ -0.35
BRPF3-201ENST00000339717 PCDH1Q08174 1060 aa12.89□□□□□ -0.35
BRPF3-201ENST00000339717 DNASE1L3Q13609 305 aa12.89□□□□□ -0.35
BRPF3-201ENST00000339717 INSCQ1MX18 579 aa12.89□□□□□ -0.35
BRPF3-201ENST00000339717 C2CD6Q53TS8 623 aa12.89□□□□□ -0.35
BRPF3-201ENST00000339717 ANKS6Q68DC2 871 aa12.89□□□□□ -0.35
BRPF3-201ENST00000339717 CCDC185Q8N715 623 aa12.89□□□□□ -0.35
BRPF3-201ENST00000339717 CDCA5Q96FF9 252 aa12.89□□□□□ -0.35
BRPF3-201ENST00000339717 TRIM9Q9C026 710 aa12.89□□□□□ -0.35
BRPF3-201ENST00000339717 MED28Q9H204 178 aa12.89□□□□□ -0.35
BRPF3-201ENST00000339717 SH3GLB2Q9NR46 395 aa12.89□□□□□ -0.35
BRPF3-201ENST00000339717 ADPRHL2Q9NX46 363 aa12.89□□□□□ -0.35
BRPF3-201ENST00000339717 IL20Q9NYY1 176 aa12.89□□□□□ -0.35
BRPF3-201ENST00000339717 SHOC2Q9UQ13 582 aa12.89□□□□□ -0.35
BRPF3-201ENST00000339717 PNPLA6Q8IY17 1366 aa12.89□□□□□ -0.35
BRPF3-201ENST00000339717 OVOS2A0A0G2JMS6 1433 aa12.89□□□□□ -0.35
BRPF3-201ENST00000339717 RGSL1A5PLK6 1076 aa12.89□□□□□ -0.35
BRPF3-201ENST00000339717 MYO1GB0I1T2 1018 aa12.89□□□□□ -0.35
BRPF3-201ENST00000339717 TRAFD1O14545 582 aaPredicted RBP12.89□□□□□ -0.35
BRPF3-201ENST00000339717 DEFA5Q01523 94 aa12.89□□□□□ -0.35
BRPF3-201ENST00000339717 CAMK1Q14012 370 aa12.89□□□□□ -0.35
BRPF3-201ENST00000339717 ARCQ7LC44 396 aa12.89□□□□□ -0.35
BRPF3-201ENST00000339717 TRABD2AQ86V40 505 aa12.89□□□□□ -0.35
BRPF3-201ENST00000339717 EID3Q8N140 333 aa12.89□□□□□ -0.35
BRPF3-201ENST00000339717 KRT78Q8N1N4 520 aa12.89□□□□□ -0.35
BRPF3-201ENST00000339717 CLIP4Q8N3C7 705 aa12.89□□□□□ -0.35
BRPF3-201ENST00000339717 SIMC1Q8NDZ2 872 aa12.89□□□□□ -0.35
BRPF3-201ENST00000339717 IP6K1Q92551 441 aa12.89□□□□□ -0.35
BRPF3-201ENST00000339717 PPP1R10Q96QC0 940 aaKnown RBP12.89□□□□□ -0.35
BRPF3-201ENST00000339717 FRMD8P1Q9BZ68 369 aaPredicted RBP12.89□□□□□ -0.35
BRPF3-201ENST00000339717 A0A1W2PP64 1363 aa12.89□□□□□ -0.35
BRPF3-201ENST00000339717 EDC4Q6P2E9 1401 aaKnown RBP12.89□□□□□ -0.35
BRPF3-201ENST00000339717 ALX3O95076 343 aa12.89□□□□□ -0.35
BRPF3-201ENST00000339717 ATP6V1B2P21281 511 aa12.89□□□□□ -0.35
BRPF3-201ENST00000339717 STAT5AP42229 794 aa12.89□□□□□ -0.35
BRPF3-201ENST00000339717 CAPZA2P47755 286 aa12.89□□□□□ -0.35
BRPF3-201ENST00000339717 STAT5BP51692 787 aa12.89□□□□□ -0.35
BRPF3-201ENST00000339717 MAB21L1Q13394 359 aa12.89□□□□□ -0.35
BRPF3-201ENST00000339717 C11orf63Q6NUN7 778 aa12.89□□□□□ -0.35
BRPF3-201ENST00000339717 DNAJC14Q6Y2X3 702 aaPredicted RBP12.89□□□□□ -0.35
BRPF3-201ENST00000339717 SLC15A3Q8IY34 581 aa12.89□□□□□ -0.35
BRPF3-201ENST00000339717 MB21D2Q8IYB1 491 aaPredicted RBP12.89□□□□□ -0.35
BRPF3-201ENST00000339717 CAMKK1Q8N5S9 505 aa12.89□□□□□ -0.35
BRPF3-201ENST00000339717 SSX3Q99909 188 aa12.89□□□□□ -0.35
BRPF3-201ENST00000339717 SLC22A4Q9H015 551 aa12.89□□□□□ -0.35
BRPF3-201ENST00000339717 DDX43Q9NXZ2 648 aaKnown RBP12.89□□□□□ -0.35
BRPF3-201ENST00000339717 A0A1W2PPW3 197 aa12.88□□□□□ -0.35
BRPF3-201ENST00000339717 K7ERI5 159 aa12.88□□□□□ -0.35
BRPF3-201ENST00000339717 ATMINO43313 823 aaPredicted RBP12.88□□□□□ -0.35
BRPF3-201ENST00000339717 SSNA1O43805 119 aa12.88□□□□□ -0.35
BRPF3-201ENST00000339717 PRMT3O60678 531 aa12.88□□□□□ -0.35
BRPF3-201ENST00000339717 PAHP00439 452 aa12.88□□□□□ -0.35
BRPF3-201ENST00000339717 APOC1P02654 83 aa12.88□□□□□ -0.35
BRPF3-201ENST00000339717 DSC3Q14574 896 aa12.88□□□□□ -0.35
BRPF3-201ENST00000339717 GALNT11Q8NCW6 608 aa12.88□□□□□ -0.35
BRPF3-201ENST00000339717 SRPK1Q96SB4 655 aaKnown RBP12.88□□□□□ -0.35
BRPF3-201ENST00000339717 SYNDIG1Q9H7V2 258 aa12.88□□□□□ -0.35
BRPF3-201ENST00000339717 PCDH10Q9P2E7 1040 aa12.88□□□□□ -0.35
BRPF3-201ENST00000339717 SLC16A3O15427 465 aaKnown RBP12.88□□□□□ -0.35
BRPF3-201ENST00000339717 CTDNEP1O95476 244 aa12.88□□□□□ -0.35
BRPF3-201ENST00000339717 SERPINA1P01009 418 aa12.88□□□□□ -0.35
BRPF3-201ENST00000339717 GCP02774 474 aa12.88□□□□□ -0.35
BRPF3-201ENST00000339717 NR3C1P04150 777 aa12.88□□□□□ -0.35
BRPF3-201ENST00000339717 CYP19A1P11511 503 aaPredicted RBP12.88□□□□□ -0.35
BRPF3-201ENST00000339717 SPRP35270 261 aaPredicted RBP12.88□□□□□ -0.35
BRPF3-201ENST00000339717 PBX1P40424 430 aa12.88□□□□□ -0.35
BRPF3-201ENST00000339717 PKNOX1P55347 436 aa12.88□□□□□ -0.35
BRPF3-201ENST00000339717 PLEKHG7Q6ZR37 379 aa12.88□□□□□ -0.35
BRPF3-201ENST00000339717 ASRGL1Q7L266 308 aa12.88□□□□□ -0.35
BRPF3-201ENST00000339717 CHPT1Q8WUD6 406 aa12.88□□□□□ -0.35
BRPF3-201ENST00000339717 NMUR2Q9GZQ4 415 aa12.88□□□□□ -0.35
BRPF3-201ENST00000339717 BRD7Q9NPI1 651 aa12.88□□□□□ -0.35
BRPF3-201ENST00000339717 CDV3Q9UKY7 258 aaKnown RBP12.88□□□□□ -0.35
BRPF3-201ENST00000339717 REXO2Q9Y3B8 237 aaKnown RBP12.88□□□□□ -0.35
BRPF3-201ENST00000339717 FAM237AA0A1B0GTK4 181 aa12.88□□□□□ -0.35
BRPF3-201ENST00000339717 FDPSP14324 419 aaKnown RBP12.88□□□□□ -0.35
BRPF3-201ENST00000339717 RFC4P35249 363 aa12.88□□□□□ -0.35
BRPF3-201ENST00000339717 INHBEP58166 350 aa12.88□□□□□ -0.35
BRPF3-201ENST00000339717 GMFBP60983 142 aa12.88□□□□□ -0.35
BRPF3-201ENST00000339717 BTG3Q14201 252 aaPredicted RBP12.88□□□□□ -0.35
BRPF3-201ENST00000339717 EPHA7Q15375 998 aa12.88□□□□□ -0.35
BRPF3-201ENST00000339717 ZNF181Q2M3W8 571 aa12.88□□□□□ -0.35
BRPF3-201ENST00000339717 DENND5BQ6ZUT9 1274 aa12.88□□□□□ -0.35
BRPF3-201ENST00000339717 ARHGEF26Q96DR7 871 aa12.88□□□□□ -0.35
BRPF3-201ENST00000339717 CLIP3Q96DZ5 547 aa12.88□□□□□ -0.35
BRPF3-201ENST00000339717 DCAF5Q96JK2 942 aa12.88□□□□□ -0.35
BRPF3-201ENST00000339717 PHOX2BQ99453 314 aa12.88□□□□□ -0.35
BRPF3-201ENST00000339717 TRPM5Q9NZQ8 1165 aa12.88□□□□□ -0.35
BRPF3-201ENST00000339717 SLAIN2Q9P270 581 aa12.88□□□□□ -0.35
BRPF3-201ENST00000339717 E2F3O00716 465 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms