RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 CNPY3Q9BT09 278 aa19.31■□□□□ 0.68
PSPC1-201ENST00000338910 B3GNT5Q9BYG0 378 aa19.31■□□□□ 0.68
PSPC1-201ENST00000338910 NDUFA13Q9P0J0 144 aa19.31■□□□□ 0.68
PSPC1-201ENST00000338910 HESX1Q9UBX0 185 aa19.31■□□□□ 0.68
PSPC1-201ENST00000338910 MARCOQ9UEW3 520 aaPredicted RBP19.31■□□□□ 0.68
PSPC1-201ENST00000338910 ADAMTS6Q9UKP5 1117 aa19.31■□□□□ 0.68
PSPC1-201ENST00000338910 EFR3BQ9Y2G0 817 aa19.31■□□□□ 0.68
PSPC1-201ENST00000338910 MEI4A8MW99 385 aa19.3■□□□□ 0.68
PSPC1-201ENST00000338910 TRIM49D1C9J1S8 452 aa19.3■□□□□ 0.68
PSPC1-201ENST00000338910 KITP10721 976 aa19.3■□□□□ 0.68
PSPC1-201ENST00000338910 MRPS5P82675 430 aaKnown RBP19.3■□□□□ 0.68
PSPC1-201ENST00000338910 SOX4Q06945 474 aaPredicted RBP19.3■□□□□ 0.68
PSPC1-201ENST00000338910 MMRN1Q13201 1228 aa19.3■□□□□ 0.68
PSPC1-201ENST00000338910 UBAP2LQ14157 1087 aaKnown RBP19.3■□□□□ 0.68
PSPC1-201ENST00000338910 ACAP1Q15027 740 aa19.3■□□□□ 0.68
PSPC1-201ENST00000338910 STILQ15468 1287 aa19.3■□□□□ 0.68
PSPC1-201ENST00000338910 CHI3L2Q15782 390 aa19.3■□□□□ 0.68
PSPC1-201ENST00000338910 PKDCCQ504Y2 493 aa19.3■□□□□ 0.68
PSPC1-201ENST00000338910 FRMD8P1Q9BZ68 369 aaPredicted RBP19.3■□□□□ 0.68
PSPC1-201ENST00000338910 CLIC5Q9NZA1 410 aa19.3■□□□□ 0.68
PSPC1-201ENST00000338910 HSFX1Q9UBD0 423 aa19.3■□□□□ 0.68
PSPC1-201ENST00000338910 G3BP2Q9UN86 482 aaKnown RBP19.3■□□□□ 0.68
PSPC1-201ENST00000338910 HBS1LQ9Y450 684 aaKnown RBP19.3■□□□□ 0.68
PSPC1-201ENST00000338910 TEX264Q9Y6I9 313 aa19.3■□□□□ 0.68
PSPC1-201ENST00000338910 KPNA7A9QM74 516 aa19.3■□□□□ 0.68
PSPC1-201ENST00000338910 PIRO00625 290 aa19.3■□□□□ 0.68
PSPC1-201ENST00000338910 AP1G1O43747 822 aa19.3■□□□□ 0.68
PSPC1-201ENST00000338910 CCNT2O60583 730 aaKnown RBP19.3■□□□□ 0.68
PSPC1-201ENST00000338910 GABBR2O75899 941 aa19.3■□□□□ 0.68
PSPC1-201ENST00000338910 C1QAP02745 245 aa19.3■□□□□ 0.68
PSPC1-201ENST00000338910 ITGA2BP08514 1039 aa19.3■□□□□ 0.68
PSPC1-201ENST00000338910 USP46P62068 366 aa19.3■□□□□ 0.68
PSPC1-201ENST00000338910 TTC39BQ5VTQ0 682 aaPredicted RBP19.3■□□□□ 0.68
PSPC1-201ENST00000338910 SCYL2Q6P3W7 929 aa19.3■□□□□ 0.68
PSPC1-201ENST00000338910 BBS12Q6ZW61 710 aa19.3■□□□□ 0.68
PSPC1-201ENST00000338910 SLC26A11Q86WA9 606 aa19.3■□□□□ 0.68
PSPC1-201ENST00000338910 UNC45BQ8IWX7 931 aa19.3■□□□□ 0.68
PSPC1-201ENST00000338910 ARRDC4Q8NCT1 418 aa19.3■□□□□ 0.68
PSPC1-201ENST00000338910 SLC35F5Q8WV83 523 aa19.3■□□□□ 0.68
PSPC1-201ENST00000338910 C20orf27Q9GZN8 174 aa19.3■□□□□ 0.68
PSPC1-201ENST00000338910 IPPQ9Y573 584 aa19.3■□□□□ 0.68
PSPC1-201ENST00000338910 SNNO75324 88 aaPredicted RBP19.29■□□□□ 0.68
PSPC1-201ENST00000338910 PEX2P28328 305 aa19.29■□□□□ 0.68
PSPC1-201ENST00000338910 ADORA2BP29275 332 aa19.29■□□□□ 0.68
PSPC1-201ENST00000338910 GNL1P36915 607 aaPredicted RBP19.29■□□□□ 0.68
PSPC1-201ENST00000338910 RPL26P61254 145 aaKnown RBP19.29■□□□□ 0.68
PSPC1-201ENST00000338910 ITGA9Q13797 1035 aa19.29■□□□□ 0.68
PSPC1-201ENST00000338910 PDK3Q15120 406 aa19.29■□□□□ 0.68
PSPC1-201ENST00000338910 CCDC14Q49A88 953 aa19.29■□□□□ 0.68
PSPC1-201ENST00000338910 TWF2Q6IBS0 349 aaKnown RBP19.29■□□□□ 0.68
PSPC1-201ENST00000338910 UGT2A3Q6UWM9 527 aa19.29■□□□□ 0.68
PSPC1-201ENST00000338910 CRLF3Q8IUI8 442 aa19.29■□□□□ 0.68
PSPC1-201ENST00000338910 TTC13Q8NBP0 860 aa19.29■□□□□ 0.68
PSPC1-201ENST00000338910 NMD3Q96D46 503 aaKnown RBP19.29■□□□□ 0.68
PSPC1-201ENST00000338910 MPP4Q96JB8 637 aa19.29■□□□□ 0.68
PSPC1-201ENST00000338910 EBF4Q9BQW3 602 aa19.29■□□□□ 0.68
PSPC1-201ENST00000338910 MTG1Q9BT17 334 aaPredicted RBP19.29■□□□□ 0.68
PSPC1-201ENST00000338910 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.29■□□□□ 0.68
PSPC1-201ENST00000338910 DNAAF2Q9NVR5 837 aaKnown RBP19.29■□□□□ 0.68
PSPC1-201ENST00000338910 CCDC195A0A1B0GUA6 201 aa19.29■□□□□ 0.68
PSPC1-201ENST00000338910 SDR42E2A6NKP2 422 aa19.29■□□□□ 0.68
PSPC1-201ENST00000338910 AOC2O75106 756 aa19.29■□□□□ 0.68
PSPC1-201ENST00000338910 CD4P01730 458 aa19.29■□□□□ 0.68
PSPC1-201ENST00000338910 IMPDH2P12268 514 aa19.29■□□□□ 0.68
PSPC1-201ENST00000338910 CCDC130P13994 396 aa19.29■□□□□ 0.68
PSPC1-201ENST00000338910 CHN2P52757 468 aa19.29■□□□□ 0.68
PSPC1-201ENST00000338910 CDH6P55285 790 aa19.29■□□□□ 0.68
PSPC1-201ENST00000338910 BASP1P80723 227 aaKnown RBP19.29■□□□□ 0.68
PSPC1-201ENST00000338910 SLC25A3Q00325 362 aa19.29■□□□□ 0.68
PSPC1-201ENST00000338910 CCNIQ14094 377 aa19.29■□□□□ 0.68
PSPC1-201ENST00000338910 MAP3K21Q5TCX8 1036 aa19.29■□□□□ 0.68
PSPC1-201ENST00000338910 OLFML1Q6UWY5 402 aa19.29■□□□□ 0.68
PSPC1-201ENST00000338910 SMG8Q8ND04 991 aaKnown RBP19.29■□□□□ 0.68
PSPC1-201ENST00000338910 GDPD5Q8WTR4 605 aa19.29■□□□□ 0.68
PSPC1-201ENST00000338910 KBTBD7Q8WVZ9 684 aa19.29■□□□□ 0.68
PSPC1-201ENST00000338910 DGCR14Q96DF8 476 aaKnown RBP19.29■□□□□ 0.68
PSPC1-201ENST00000338910 RILPQ96NA2 401 aa19.29■□□□□ 0.68
PSPC1-201ENST00000338910 SLC4A5Q9BY07 1137 aa19.29■□□□□ 0.68
PSPC1-201ENST00000338910 PTTG2Q9NZH5 202 aa19.29■□□□□ 0.68
PSPC1-201ENST00000338910 SORCS3Q9UPU3 1222 aa19.29■□□□□ 0.68
PSPC1-201ENST00000338910 ARHGAP42A6NI28 874 aa19.28■□□□□ 0.68
PSPC1-201ENST00000338910 CYB561D2O14569 222 aa19.28■□□□□ 0.68
PSPC1-201ENST00000338910 SPAG6O75602 509 aa19.28■□□□□ 0.68
PSPC1-201ENST00000338910 YWHAGP61981 247 aaKnown RBP eCLIP19.28■□□□□ 0.68
PSPC1-201ENST00000338910 CACNB2Q08289 660 aaPredicted RBP19.28■□□□□ 0.68
PSPC1-201ENST00000338910 TAZQ16635 292 aa19.28■□□□□ 0.68
PSPC1-201ENST00000338910 MMEL1Q495T6 779 aa19.28■□□□□ 0.68
PSPC1-201ENST00000338910 ANKRD20A4Q4UJ75 823 aa19.28■□□□□ 0.68
PSPC1-201ENST00000338910 FAM47CQ5HY64 1035 aa19.28■□□□□ 0.68
PSPC1-201ENST00000338910 TMEM110Q86TL2 294 aa19.28■□□□□ 0.68
PSPC1-201ENST00000338910 UNC93AQ86WB7 457 aa19.28■□□□□ 0.68
PSPC1-201ENST00000338910 PIP4K2CQ8TBX8 421 aa19.28■□□□□ 0.68
PSPC1-201ENST00000338910 HHIPL1Q96JK4 782 aa19.28■□□□□ 0.68
PSPC1-201ENST00000338910 NGRNQ9NPE2 291 aaKnown RBP19.28■□□□□ 0.68
PSPC1-201ENST00000338910 PAPSS1O43252 624 aaPredicted RBP19.27■□□□□ 0.68
PSPC1-201ENST00000338910 PRPSAP2O60256 369 aa19.27■□□□□ 0.68
PSPC1-201ENST00000338910 SMIM18P0DKX4 95 aa19.27■□□□□ 0.68
PSPC1-201ENST00000338910 SLC6A3Q01959 620 aa19.27■□□□□ 0.68
PSPC1-201ENST00000338910 WASHC5Q12768 1159 aa19.27■□□□□ 0.68
PSPC1-201ENST00000338910 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms