RNA–Protein interactions for RNA: ENST00000338635.10

XRCC4-202, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS P4 TSL 2 BASIC

Gene XRCC4, Length 1,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-202ENST00000338635 RTP4Q96DX8 246 aa2.84□□□□□ -1.95
XRCC4-202ENST00000338635 PRDM16Q9HAZ2 1276 aa2.84□□□□□ -1.95
XRCC4-202ENST00000338635 ZBTB26Q9HCK0 441 aa2.84□□□□□ -1.95
XRCC4-202ENST00000338635 DOCK7Q96N67 2140 aa2.84□□□□□ -1.96
XRCC4-202ENST00000338635 PLSCR5A0PG75 271 aa2.83□□□□□ -1.96
XRCC4-202ENST00000338635 SLC16A5O15375 505 aa2.83□□□□□ -1.96
XRCC4-202ENST00000338635 COQ9O75208 318 aa2.83□□□□□ -1.96
XRCC4-202ENST00000338635 KRT36O76013 467 aa2.83□□□□□ -1.96
XRCC4-202ENST00000338635 IGLV2-11P01706 119 aa2.83□□□□□ -1.96
XRCC4-202ENST00000338635 SP1P08047 785 aa2.83□□□□□ -1.96
XRCC4-202ENST00000338635 ARP10275 920 aa2.83□□□□□ -1.96
XRCC4-202ENST00000338635 GSTM5P46439 218 aa2.83□□□□□ -1.96
XRCC4-202ENST00000338635 CXCR3P49682 368 aa2.83□□□□□ -1.96
XRCC4-202ENST00000338635 MCL1Q07820 350 aa2.83□□□□□ -1.96
XRCC4-202ENST00000338635 GPS1Q13098 491 aa2.83□□□□□ -1.96
XRCC4-202ENST00000338635 RNF220Q5VTB9 566 aa2.83□□□□□ -1.96
XRCC4-202ENST00000338635 DCAF12L2Q5VW00 463 aa2.83□□□□□ -1.96
XRCC4-202ENST00000338635 WBP2NLQ6ICG8 309 aa2.83□□□□□ -1.96
XRCC4-202ENST00000338635 TLDC1Q6P9B6 456 aa2.83□□□□□ -1.96
XRCC4-202ENST00000338635 H1FNTQ75WM6 255 aaPredicted RBP2.83□□□□□ -1.96
XRCC4-202ENST00000338635 KDELC2Q7Z4H8 507 aa2.83□□□□□ -1.96
XRCC4-202ENST00000338635 CLIP4Q8N3C7 705 aa2.83□□□□□ -1.96
XRCC4-202ENST00000338635 LRTOMTQ8WZ04 291 aa2.83□□□□□ -1.96
XRCC4-202ENST00000338635 HES6Q96HZ4 224 aa2.83□□□□□ -1.96
XRCC4-202ENST00000338635 DUX5Q96PT3 197 aa2.83□□□□□ -1.96
XRCC4-202ENST00000338635 DDX31Q9H8H2 851 aaKnown RBP2.83□□□□□ -1.96
XRCC4-202ENST00000338635 HEYLQ9NQ87 328 aaPredicted RBP2.83□□□□□ -1.96
XRCC4-202ENST00000338635 TCF7L2Q9NQB0 619 aa2.83□□□□□ -1.96
XRCC4-202ENST00000338635 TMOD4Q9NZQ9 345 aa2.83□□□□□ -1.96
XRCC4-202ENST00000338635 LOC102724159A0A0B4J2E5 919 aa2.83□□□□□ -1.96
XRCC4-202ENST00000338635 PRR23AA6NEV1 266 aa2.83□□□□□ -1.96
XRCC4-202ENST00000338635 PPP6R2O75170 966 aa2.83□□□□□ -1.96
XRCC4-202ENST00000338635 RFPL1O75677 317 aa2.83□□□□□ -1.96
XRCC4-202ENST00000338635 RAB27AP51159 221 aa2.83□□□□□ -1.96
XRCC4-202ENST00000338635 CACNB3P54284 484 aa2.83□□□□□ -1.96
XRCC4-202ENST00000338635 PMPCAQ10713 525 aa2.83□□□□□ -1.96
XRCC4-202ENST00000338635 TRAF2Q12933 501 aa2.83□□□□□ -1.96
XRCC4-202ENST00000338635 PWP2Q15269 919 aaKnown RBP2.83□□□□□ -1.96
XRCC4-202ENST00000338635 TTF1Q15361 905 aaPredicted RBP2.83□□□□□ -1.96
XRCC4-202ENST00000338635 KIF19Q2TAC6 998 aa2.83□□□□□ -1.96
XRCC4-202ENST00000338635 CEP85LQ5SZL2 805 aa2.83□□□□□ -1.96
XRCC4-202ENST00000338635 RRAGBQ5VZM2 374 aa2.83□□□□□ -1.96
XRCC4-202ENST00000338635 KRT28Q7Z3Y7 464 aa2.83□□□□□ -1.96
XRCC4-202ENST00000338635 RAVER1Q8IY67 606 aaKnown RBP2.83□□□□□ -1.96
XRCC4-202ENST00000338635 PAQR4Q8N4S7 273 aaPredicted RBP2.83□□□□□ -1.96
XRCC4-202ENST00000338635 ENGASEQ8NFI3 743 aa2.83□□□□□ -1.96
XRCC4-202ENST00000338635 MSLNLQ96KJ4 702 aa2.83□□□□□ -1.96
XRCC4-202ENST00000338635 EIF3CQ99613 913 aaKnown RBP2.83□□□□□ -1.96
XRCC4-202ENST00000338635 SPRY4Q9C004 299 aa2.83□□□□□ -1.96
XRCC4-202ENST00000338635 IL21RQ9HBE5 538 aa2.83□□□□□ -1.96
XRCC4-202ENST00000338635 ANKRD62A6NC57 917 aa2.82□□□□□ -1.96
XRCC4-202ENST00000338635 I6L893 689 aaPredicted RBP2.82□□□□□ -1.96
XRCC4-202ENST00000338635 M0QZQ0 153 aa2.82□□□□□ -1.96
XRCC4-202ENST00000338635 ZSCAN9O15535 394 aaPredicted RBP2.82□□□□□ -1.96
XRCC4-202ENST00000338635 CNTN5O94779 1100 aa2.82□□□□□ -1.96
XRCC4-202ENST00000338635 ZNF12P17014 697 aa2.82□□□□□ -1.96
XRCC4-202ENST00000338635 PMS2P54278 862 aa2.82□□□□□ -1.96
XRCC4-202ENST00000338635 POLE2P56282 527 aa2.82□□□□□ -1.96
XRCC4-202ENST00000338635 SELENOVP59797 346 aa2.82□□□□□ -1.96
XRCC4-202ENST00000338635 ZP1P60852 638 aa2.82□□□□□ -1.96
XRCC4-202ENST00000338635 POLD3Q15054 466 aaPredicted RBP2.82□□□□□ -1.96
XRCC4-202ENST00000338635 SF3B4Q15427 424 aaKnown RBP eCLIP2.82□□□□□ -1.96
XRCC4-202ENST00000338635 KIF26BQ2KJY2 2108 aa2.82□□□□□ -1.96
XRCC4-202ENST00000338635 TDRD12Q587J7 1177 aaKnown RBP2.82□□□□□ -1.96
XRCC4-202ENST00000338635 FSCBQ5H9T9 825 aa2.82□□□□□ -1.96
XRCC4-202ENST00000338635 ENTPD8Q5MY95 495 aa2.82□□□□□ -1.96
XRCC4-202ENST00000338635 ZNF449Q6P9G9 518 aa2.82□□□□□ -1.96
XRCC4-202ENST00000338635 ZCRB1Q8TBF4 217 aaKnown RBP2.82□□□□□ -1.96
XRCC4-202ENST00000338635 NODALQ96S42 347 aa2.82□□□□□ -1.96
XRCC4-202ENST00000338635 WDR77Q9BQA1 342 aaPredicted RBP2.82□□□□□ -1.96
XRCC4-202ENST00000338635 CATSPERBQ9H7T0 1116 aa2.82□□□□□ -1.96
XRCC4-202ENST00000338635 MTPAPQ9NVV4 582 aaKnown RBP eCLIP2.82□□□□□ -1.96
XRCC4-202ENST00000338635 NOP58Q9Y2X3 529 aaKnown RBP2.82□□□□□ -1.96
XRCC4-202ENST00000338635 KAT7O95251 611 aa2.81□□□□□ -1.96
XRCC4-202ENST00000338635 SERPINB2P05120 415 aa2.81□□□□□ -1.96
XRCC4-202ENST00000338635 ANXA2P07355 339 aaKnown RBP2.81□□□□□ -1.96
XRCC4-202ENST00000338635 SNRNP70P08621 437 aaKnown RBP2.81□□□□□ -1.96
XRCC4-202ENST00000338635 TGM2P21980 687 aa2.81□□□□□ -1.96
XRCC4-202ENST00000338635 SLC37A1P57057 533 aa2.81□□□□□ -1.96
XRCC4-202ENST00000338635 SLC39A14Q15043 492 aa2.81□□□□□ -1.96
XRCC4-202ENST00000338635 PLCB4Q15147 1175 aa2.81□□□□□ -1.96
XRCC4-202ENST00000338635 ZRSR1Q15695 479 aaKnown RBP2.81□□□□□ -1.96
XRCC4-202ENST00000338635 P3H1Q32P28 736 aa2.81□□□□□ -1.96
XRCC4-202ENST00000338635 FAXCQ5TGI0 409 aa2.81□□□□□ -1.96
XRCC4-202ENST00000338635 DSTYKQ6XUX3 929 aa2.81□□□□□ -1.96
XRCC4-202ENST00000338635 MEX3BQ6ZN04 569 aaKnown RBP2.81□□□□□ -1.96
XRCC4-202ENST00000338635 PIK3AP1Q6ZUJ8 805 aa2.81□□□□□ -1.96
XRCC4-202ENST00000338635 ZNF367Q7RTV3 350 aa2.81□□□□□ -1.96
XRCC4-202ENST00000338635 FAM177A1Q8N128 213 aaPredicted RBP2.81□□□□□ -1.96
XRCC4-202ENST00000338635 SRFBP1Q8NEF9 429 aaKnown RBP2.81□□□□□ -1.96
XRCC4-202ENST00000338635 ZNF419Q96HQ0 510 aaPredicted RBP2.81□□□□□ -1.96
XRCC4-202ENST00000338635 POLDIP3Q9BY77 421 aaKnown RBP2.81□□□□□ -1.96
XRCC4-202ENST00000338635 LDHAL6BQ9BYZ2 381 aaPredicted RBP2.81□□□□□ -1.96
XRCC4-202ENST00000338635 FAM204AQ9H8W3 233 aa2.81□□□□□ -1.96
XRCC4-202ENST00000338635 SDF2L1Q9HCN8 221 aa2.81□□□□□ -1.96
XRCC4-202ENST00000338635 A0A087WZ62 844 aa2.8□□□□□ -1.96
XRCC4-202ENST00000338635 CXorf65A6NEN9 183 aa2.8□□□□□ -1.96
XRCC4-202ENST00000338635 A6NNZ2 444 aa2.8□□□□□ -1.96
XRCC4-202ENST00000338635 F8W8V4 182 aa2.8□□□□□ -1.96
XRCC4-202ENST00000338635 BUB3O43684 328 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms