RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 I6L893 689 aaPredicted RBP12.28□□□□□ -0.44
SPTLC1-202ENST00000337841 DAPK3O43293 454 aa12.28□□□□□ -0.44
SPTLC1-202ENST00000337841 BUB1O43683 1085 aa12.28□□□□□ -0.44
SPTLC1-202ENST00000337841 SPOPO43791 374 aa12.28□□□□□ -0.44
SPTLC1-202ENST00000337841 CREB3O43889 395 aa12.28□□□□□ -0.44
SPTLC1-202ENST00000337841 BUB1BO60566 1050 aaPredicted RBP12.28□□□□□ -0.44
SPTLC1-202ENST00000337841 LUC7L3O95232 432 aaKnown RBP12.28□□□□□ -0.44
SPTLC1-202ENST00000337841 KAT7O95251 611 aa12.28□□□□□ -0.44
SPTLC1-202ENST00000337841 CISD3P0C7P0 127 aa12.28□□□□□ -0.44
SPTLC1-202ENST00000337841 RARAP10276 462 aa12.28□□□□□ -0.44
SPTLC1-202ENST00000337841 HOXD9P28356 352 aaPredicted RBP12.28□□□□□ -0.44
SPTLC1-202ENST00000337841 TNFRSF4P43489 277 aa12.28□□□□□ -0.44
SPTLC1-202ENST00000337841 CDH18Q13634 790 aa12.28□□□□□ -0.44
SPTLC1-202ENST00000337841 LRRC32Q14392 662 aa12.28□□□□□ -0.44
SPTLC1-202ENST00000337841 GAB4Q2WGN9 574 aa12.28□□□□□ -0.44
SPTLC1-202ENST00000337841 FBXO43Q4G163 708 aa12.28□□□□□ -0.44
SPTLC1-202ENST00000337841 ODF2Q5BJF6 829 aa12.28□□□□□ -0.44
SPTLC1-202ENST00000337841 TMEM196Q5HYL7 178 aa12.28□□□□□ -0.44
SPTLC1-202ENST00000337841 DGKKQ5KSL6 1271 aa12.28□□□□□ -0.44
SPTLC1-202ENST00000337841 ZFYVE27Q5T4F4 411 aa12.28□□□□□ -0.44
SPTLC1-202ENST00000337841 TXNDC11Q6PKC3 985 aa12.28□□□□□ -0.44
SPTLC1-202ENST00000337841 CHST9Q7L1S5 443 aa12.28□□□□□ -0.44
SPTLC1-202ENST00000337841 BMP8AQ7Z5Y6 402 aa12.28□□□□□ -0.44
SPTLC1-202ENST00000337841 DAAM2Q86T65 1068 aa12.28□□□□□ -0.44
SPTLC1-202ENST00000337841 MFN1Q8IWA4 741 aa12.28□□□□□ -0.44
SPTLC1-202ENST00000337841 MAP7D3Q8IWC1 876 aa12.28□□□□□ -0.44
SPTLC1-202ENST00000337841 CCAR2Q8N163 923 aaKnown RBP12.28□□□□□ -0.44
SPTLC1-202ENST00000337841 TPCN2Q8NHX9 752 aa12.28□□□□□ -0.44
SPTLC1-202ENST00000337841 KIAA1524Q8TCG1 905 aa12.28□□□□□ -0.44
SPTLC1-202ENST00000337841 UBE2Q2Q8WVN8 375 aa12.28□□□□□ -0.44
SPTLC1-202ENST00000337841 TBC1D31Q96DN5 1066 aa12.28□□□□□ -0.44
SPTLC1-202ENST00000337841 PRICKLE1Q96MT3 831 aaPredicted RBP12.28□□□□□ -0.44
SPTLC1-202ENST00000337841 SNRNP25Q9BV90 132 aaKnown RBP12.28□□□□□ -0.44
SPTLC1-202ENST00000337841 LMAN1LQ9HAT1 526 aa12.28□□□□□ -0.44
SPTLC1-202ENST00000337841 LTB4R2Q9NPC1 389 aa12.28□□□□□ -0.44
SPTLC1-202ENST00000337841 SLC27A6Q9Y2P4 619 aa12.28□□□□□ -0.44
SPTLC1-202ENST00000337841 SIT1Q9Y3P8 196 aa12.28□□□□□ -0.44
SPTLC1-202ENST00000337841 IGLV3-10A0A075B6K4 115 aa12.27□□□□□ -0.45
SPTLC1-202ENST00000337841 MACROD2A1Z1Q3 448 aa12.27□□□□□ -0.45
SPTLC1-202ENST00000337841 FAM72CH0Y354 149 aa12.27□□□□□ -0.45
SPTLC1-202ENST00000337841 EEF2KO00418 725 aaKnown RBP12.27□□□□□ -0.45
SPTLC1-202ENST00000337841 DLL1O00548 723 aa12.27□□□□□ -0.45
SPTLC1-202ENST00000337841 ZSCAN12O43309 604 aa12.27□□□□□ -0.45
SPTLC1-202ENST00000337841 LRIG2O94898 1065 aa12.27□□□□□ -0.45
SPTLC1-202ENST00000337841 MOCS3O95396 460 aa12.27□□□□□ -0.45
SPTLC1-202ENST00000337841 RHOQP17081 205 aa12.27□□□□□ -0.45
SPTLC1-202ENST00000337841 COMTP21964 271 aa12.27□□□□□ -0.45
SPTLC1-202ENST00000337841 IL1R2P27930 398 aa12.27□□□□□ -0.45
SPTLC1-202ENST00000337841 EPHB2P29323 1055 aa12.27□□□□□ -0.45
SPTLC1-202ENST00000337841 GGCXP38435 758 aa12.27□□□□□ -0.45
SPTLC1-202ENST00000337841 ARL4AP40617 200 aa12.27□□□□□ -0.45
SPTLC1-202ENST00000337841 HCAR3P49019 387 aa12.27□□□□□ -0.45
SPTLC1-202ENST00000337841 SGSHP51688 502 aa12.27□□□□□ -0.45
SPTLC1-202ENST00000337841 CLCN5P51795 746 aa12.27□□□□□ -0.45
SPTLC1-202ENST00000337841 SLC12A1Q13621 1099 aa12.27□□□□□ -0.45
SPTLC1-202ENST00000337841 KRT81Q14533 505 aa12.27□□□□□ -0.45
SPTLC1-202ENST00000337841 PPP6R3Q5H9R7 873 aaPredicted RBP12.27□□□□□ -0.45
SPTLC1-202ENST00000337841 KCNT1Q5JUK3 1230 aa12.27□□□□□ -0.45
SPTLC1-202ENST00000337841 FAM72AQ5TYM5 149 aa12.27□□□□□ -0.45
SPTLC1-202ENST00000337841 LRRC38Q5VT99 294 aa12.27□□□□□ -0.45
SPTLC1-202ENST00000337841 DAB2IPQ5VWQ8 1189 aa12.27□□□□□ -0.45
SPTLC1-202ENST00000337841 FAM72DQ6L9T8 149 aa12.27□□□□□ -0.45
SPTLC1-202ENST00000337841 C11orf63Q6NUN7 778 aa12.27□□□□□ -0.45
SPTLC1-202ENST00000337841 ZNF662Q6ZS27 426 aa12.27□□□□□ -0.45
SPTLC1-202ENST00000337841 C12orf40Q86WS4 652 aa12.27□□□□□ -0.45
SPTLC1-202ENST00000337841 FAM72BQ86X60 149 aa12.27□□□□□ -0.45
SPTLC1-202ENST00000337841 RHOT1Q8IXI2 618 aa12.27□□□□□ -0.45
SPTLC1-202ENST00000337841 ZNF683Q8IZ20 524 aa12.27□□□□□ -0.45
SPTLC1-202ENST00000337841 SYCE1Q8N0S2 351 aa12.27□□□□□ -0.45
SPTLC1-202ENST00000337841 PYROXD2Q8N2H3 581 aa12.27□□□□□ -0.45
SPTLC1-202ENST00000337841 SYNPOQ8N3V7 929 aa12.27□□□□□ -0.45
SPTLC1-202ENST00000337841 KCTD6Q8NC69 237 aa12.27□□□□□ -0.45
SPTLC1-202ENST00000337841 WFIKKN2Q8TEU8 576 aa12.27□□□□□ -0.45
SPTLC1-202ENST00000337841 UCMAQ8WVF2 138 aa12.27□□□□□ -0.45
SPTLC1-202ENST00000337841 HSPH1Q92598 858 aa12.27□□□□□ -0.45
SPTLC1-202ENST00000337841 MYEOVQ96EZ4 313 aa12.27□□□□□ -0.45
SPTLC1-202ENST00000337841 PEBP4Q96S96 227 aa12.27□□□□□ -0.45
SPTLC1-202ENST00000337841 MAGEB5Q9BZ81 275 aa12.27□□□□□ -0.45
SPTLC1-202ENST00000337841 CATSPERBQ9H7T0 1116 aa12.27□□□□□ -0.45
SPTLC1-202ENST00000337841 FBRSL1Q9HCM7 1045 aaKnown RBP12.27□□□□□ -0.45
SPTLC1-202ENST00000337841 GPATCH2LQ9NWQ4 482 aa12.27□□□□□ -0.45
SPTLC1-202ENST00000337841 MPP6Q9NZW5 540 aa12.27□□□□□ -0.45
SPTLC1-202ENST00000337841 SALL4Q9UJQ4 1053 aa12.27□□□□□ -0.45
SPTLC1-202ENST00000337841 GUCA1BQ9UMX6 200 aa12.27□□□□□ -0.45
SPTLC1-202ENST00000337841 PPP2R2CQ9Y2T4 447 aa12.27□□□□□ -0.45
SPTLC1-202ENST00000337841 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.27□□□□□ -0.45
SPTLC1-202ENST00000337841 SHISA7A6NL88 538 aa12.26□□□□□ -0.45
SPTLC1-202ENST00000337841 H3BRJ5 948 aa12.26□□□□□ -0.45
SPTLC1-202ENST00000337841 CNTN5O94779 1100 aa12.26□□□□□ -0.45
SPTLC1-202ENST00000337841 TNNT1P13805 278 aa12.26□□□□□ -0.45
SPTLC1-202ENST00000337841 TARSP26639 723 aaKnown RBP12.26□□□□□ -0.45
SPTLC1-202ENST00000337841 OR1E1P30953 314 aa12.26□□□□□ -0.45
SPTLC1-202ENST00000337841 TAS2R40P59535 323 aa12.26□□□□□ -0.45
SPTLC1-202ENST00000337841 TPI1P60174 286 aa12.26□□□□□ -0.45
SPTLC1-202ENST00000337841 SLC25A11Q02978 314 aaKnown RBP12.26□□□□□ -0.45
SPTLC1-202ENST00000337841 KDSRQ06136 332 aa12.26□□□□□ -0.45
SPTLC1-202ENST00000337841 DMC1Q14565 340 aa12.26□□□□□ -0.45
SPTLC1-202ENST00000337841 PDK2Q15119 407 aa12.26□□□□□ -0.45
SPTLC1-202ENST00000337841 CA9Q16790 459 aa12.26□□□□□ -0.45
SPTLC1-202ENST00000337841 SMTNL2Q2TAL5 461 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms