RNA–Protein interactions for RNA: ENST00000336128.11

ZNF548-201, Transcript of zinc finger protein 548, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZNF548, Length 2,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-201ENST00000336128 SPAG6O75602 509 aa12.79□□□□□ -0.36
ZNF548-201ENST00000336128 BRAFP15056 766 aa12.79□□□□□ -0.36
ZNF548-201ENST00000336128 GARSP41250 739 aaKnown RBP12.79□□□□□ -0.36
ZNF548-201ENST00000336128 SEC24CP53992 1094 aa12.79□□□□□ -0.36
ZNF548-201ENST00000336128 RPL10AP62906 217 aaKnown RBP12.79□□□□□ -0.36
ZNF548-201ENST00000336128 TAF10Q12962 218 aa12.79□□□□□ -0.36
ZNF548-201ENST00000336128 DUSP4Q13115 394 aa12.79□□□□□ -0.36
ZNF548-201ENST00000336128 PSMD5Q16401 504 aa12.79□□□□□ -0.36
ZNF548-201ENST00000336128 PARP6Q2NL67 630 aa12.79□□□□□ -0.36
ZNF548-201ENST00000336128 SRRM1Q8IYB3 904 aaKnown RBP12.79□□□□□ -0.36
ZNF548-201ENST00000336128 FBXO22Q8NEZ5 403 aa12.79□□□□□ -0.36
ZNF548-201ENST00000336128 SLC39A13Q96H72 371 aa12.79□□□□□ -0.36
ZNF548-201ENST00000336128 IGSF21Q96ID5 467 aa12.79□□□□□ -0.36
ZNF548-201ENST00000336128 CELF6Q96J87 481 aaKnown RBP12.79□□□□□ -0.36
ZNF548-201ENST00000336128 DHRS4Q9BTZ2 278 aa12.79□□□□□ -0.36
ZNF548-201ENST00000336128 KLHL8Q9P2G9 620 aaPredicted RBP12.79□□□□□ -0.36
ZNF548-201ENST00000336128 IGSF9Q9P2J2 1179 aa12.79□□□□□ -0.36
ZNF548-201ENST00000336128 ACTL7BQ9Y614 415 aa12.79□□□□□ -0.36
ZNF548-201ENST00000336128 HS3ST4Q9Y661 456 aa12.79□□□□□ -0.36
ZNF548-201ENST00000336128 TMEM120BA0PK00 339 aa12.79□□□□□ -0.36
ZNF548-201ENST00000336128 WDR27A2RRH5 827 aa12.79□□□□□ -0.36
ZNF548-201ENST00000336128 FGF10O15520 208 aaPredicted RBP12.79□□□□□ -0.36
ZNF548-201ENST00000336128 CPP00450 1065 aa12.79□□□□□ -0.36
ZNF548-201ENST00000336128 RPL17P18621 184 aaKnown RBP12.79□□□□□ -0.36
ZNF548-201ENST00000336128 GRIA1P42261 906 aa12.79□□□□□ -0.36
ZNF548-201ENST00000336128 TBX4P57082 545 aa12.79□□□□□ -0.36
ZNF548-201ENST00000336128 SARNPP82979 210 aaKnown RBP12.79□□□□□ -0.36
ZNF548-201ENST00000336128 COG7P83436 770 aa12.79□□□□□ -0.36
ZNF548-201ENST00000336128 EFEMP1Q12805 493 aa12.79□□□□□ -0.36
ZNF548-201ENST00000336128 PKN2Q16513 984 aaKnown RBP12.79□□□□□ -0.36
ZNF548-201ENST00000336128 USP41Q3LFD5 358 aa12.79□□□□□ -0.36
ZNF548-201ENST00000336128 ARTNQ5T4W7 220 aa12.79□□□□□ -0.36
ZNF548-201ENST00000336128 FOXR1Q6PIV2 292 aa12.79□□□□□ -0.36
ZNF548-201ENST00000336128 PID1Q7Z2X4 250 aa12.79□□□□□ -0.36
ZNF548-201ENST00000336128 TRABD2AQ86V40 505 aa12.79□□□□□ -0.36
ZNF548-201ENST00000336128 NLRP14Q86W24 1093 aa12.79□□□□□ -0.36
ZNF548-201ENST00000336128 RNF168Q8IYW5 571 aaPredicted RBP12.79□□□□□ -0.36
ZNF548-201ENST00000336128 GIPC2Q8TF65 315 aa12.79□□□□□ -0.36
ZNF548-201ENST00000336128 LRRC39Q96DD0 335 aa12.79□□□□□ -0.36
ZNF548-201ENST00000336128 PAFAH2Q99487 392 aa12.79□□□□□ -0.36
ZNF548-201ENST00000336128 C11orf49Q9H6J7 331 aa12.79□□□□□ -0.36
ZNF548-201ENST00000336128 CATSPERBQ9H7T0 1116 aa12.79□□□□□ -0.36
ZNF548-201ENST00000336128 TLR8Q9NR97 1041 aaKnown RBP12.79□□□□□ -0.36
ZNF548-201ENST00000336128 INTS9Q9NV88 658 aaKnown RBP12.79□□□□□ -0.36
ZNF548-201ENST00000336128 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.79□□□□□ -0.36
ZNF548-201ENST00000336128 CLIC5Q9NZA1 410 aa12.79□□□□□ -0.36
ZNF548-201ENST00000336128 ZC3H7BQ9UGR2 993 aaKnown RBP12.79□□□□□ -0.36
ZNF548-201ENST00000336128 TTLL3Q9Y4R7 772 aa12.79□□□□□ -0.36
ZNF548-201ENST00000336128 BACE2Q9Y5Z0 518 aa12.79□□□□□ -0.36
ZNF548-201ENST00000336128 TCRBV9S1A1TA0A576 114 aa12.78□□□□□ -0.36
ZNF548-201ENST00000336128 SLC38A8A6NNN8 435 aa12.78□□□□□ -0.36
ZNF548-201ENST00000336128 RASA4BC9J798 803 aa12.78□□□□□ -0.36
ZNF548-201ENST00000336128 E9PAM4 449 aa12.78□□□□□ -0.36
ZNF548-201ENST00000336128 MTSS1O43312 755 aa12.78□□□□□ -0.36
ZNF548-201ENST00000336128 RASA4O43374 803 aa12.78□□□□□ -0.36
ZNF548-201ENST00000336128 STX2P32856 288 aa12.78□□□□□ -0.36
ZNF548-201ENST00000336128 CDK16Q00536 496 aa12.78□□□□□ -0.36
ZNF548-201ENST00000336128 NRG1Q02297 640 aaPredicted RBP12.78□□□□□ -0.36
ZNF548-201ENST00000336128 LRRC26Q2I0M4 334 aa12.78□□□□□ -0.36
ZNF548-201ENST00000336128 SPOUT1Q5T280 376 aaKnown RBP12.78□□□□□ -0.36
ZNF548-201ENST00000336128 RASIP1Q5U651 963 aa12.78□□□□□ -0.36
ZNF548-201ENST00000336128 SLC8B1Q6J4K2 584 aa12.78□□□□□ -0.36
ZNF548-201ENST00000336128 FBXO46Q6PJ61 603 aaPredicted RBP12.78□□□□□ -0.36
ZNF548-201ENST00000336128 C14orf80Q86SX3 495 aa12.78□□□□□ -0.36
ZNF548-201ENST00000336128 PDCD7Q8N8D1 485 aaKnown RBP12.78□□□□□ -0.36
ZNF548-201ENST00000336128 SIGLEC10Q96LC7 697 aa12.78□□□□□ -0.36
ZNF548-201ENST00000336128 CYTH2Q99418 400 aa12.78□□□□□ -0.36
ZNF548-201ENST00000336128 KCNK9Q9NPC2 374 aa12.78□□□□□ -0.36
ZNF548-201ENST00000336128 OLA1Q9NTK5 396 aaKnown RBP12.78□□□□□ -0.36
ZNF548-201ENST00000336128 GMNCA6NCL1 334 aa12.77□□□□□ -0.36
ZNF548-201ENST00000336128 NDUFAB1O14561 156 aa12.77□□□□□ -0.36
ZNF548-201ENST00000336128 GSTA2P09210 222 aa12.77□□□□□ -0.36
ZNF548-201ENST00000336128 SLC2A3P11169 496 aa12.77□□□□□ -0.36
ZNF548-201ENST00000336128 ATF6P18850 670 aa12.77□□□□□ -0.36
ZNF548-201ENST00000336128 KRT15P19012 456 aa12.77□□□□□ -0.36
ZNF548-201ENST00000336128 MSH2P43246 934 aa12.77□□□□□ -0.36
ZNF548-201ENST00000336128 PSEN1P49768 467 aa12.77□□□□□ -0.36
ZNF548-201ENST00000336128 TUBP50607 506 aa12.77□□□□□ -0.36
ZNF548-201ENST00000336128 TRIP4Q15650 581 aaPredicted RBP12.77□□□□□ -0.36
ZNF548-201ENST00000336128 PIK3R6Q5UE93 754 aa12.77□□□□□ -0.36
ZNF548-201ENST00000336128 LRRC8BQ6P9F7 803 aa12.77□□□□□ -0.36
ZNF548-201ENST00000336128 ARHGAP12Q8IWW6 846 aa12.77□□□□□ -0.36
ZNF548-201ENST00000336128 MPP5Q8N3R9 675 aa12.77□□□□□ -0.36
ZNF548-201ENST00000336128 ANKRD42Q8N9B4 389 aa12.77□□□□□ -0.36
ZNF548-201ENST00000336128 ANKLE1Q8NAG6 615 aa12.77□□□□□ -0.36
ZNF548-201ENST00000336128 DCAKDQ8WVC6 231 aa12.77□□□□□ -0.36
ZNF548-201ENST00000336128 ARMC5Q96C12 935 aa12.77□□□□□ -0.36
ZNF548-201ENST00000336128 EBNA1BP2Q99848 306 aaKnown RBP12.77□□□□□ -0.36
ZNF548-201ENST00000336128 TRABDQ9H4I3 376 aa12.77□□□□□ -0.36
ZNF548-201ENST00000336128 PLAC1Q9HBJ0 212 aa12.77□□□□□ -0.36
ZNF548-201ENST00000336128 GREB1Q4ZG55 1949 aa12.77□□□□□ -0.37
ZNF548-201ENST00000336128 ABHD14A-ACY1A0A1B0GW23 586 aa12.77□□□□□ -0.37
ZNF548-201ENST00000336128 DFFAO00273 331 aa12.77□□□□□ -0.37
ZNF548-201ENST00000336128 ZBTB24O43167 697 aaPredicted RBP12.77□□□□□ -0.37
ZNF548-201ENST00000336128 PIAS1O75925 651 aa12.77□□□□□ -0.37
ZNF548-201ENST00000336128 APOEP02649 317 aa12.77□□□□□ -0.37
ZNF548-201ENST00000336128 MLNP12872 115 aa12.77□□□□□ -0.37
ZNF548-201ENST00000336128 OR1D2P34982 312 aa12.77□□□□□ -0.37
ZNF548-201ENST00000336128 GJA8P48165 433 aa12.77□□□□□ -0.37
ZNF548-201ENST00000336128 DEFB103AP81534 67 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms