RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 CDH5P33151 784 aaPredicted RBP14.08□□□□□ -0.16
SYNE3-201ENST00000334258 THOP1P52888 689 aa14.08□□□□□ -0.16
SYNE3-201ENST00000334258 BNC2Q6ZN30 1099 aaPredicted RBP14.08□□□□□ -0.16
SYNE3-201ENST00000334258 WDR49Q8IV35 697 aa14.08□□□□□ -0.16
SYNE3-201ENST00000334258 SORT1Q99523 831 aa14.08□□□□□ -0.16
SYNE3-201ENST00000334258 RTKNQ9BST9 563 aa14.08□□□□□ -0.16
SYNE3-201ENST00000334258 OXCT2Q9BYC2 517 aaPredicted RBP14.08□□□□□ -0.16
SYNE3-201ENST00000334258 SENP6Q9GZR1 1112 aaPredicted RBP14.08□□□□□ -0.16
SYNE3-201ENST00000334258 ACSS2Q9NR19 701 aa14.08□□□□□ -0.16
SYNE3-201ENST00000334258 PCDHA11Q9Y5I1 949 aa14.08□□□□□ -0.16
SYNE3-201ENST00000334258 CDY2AQ9Y6F7 541 aa14.08□□□□□ -0.16
SYNE3-201ENST00000334258 CDY1Q9Y6F8 540 aa14.08□□□□□ -0.16
SYNE3-201ENST00000334258 CSDE1O75534 798 aaKnown RBP14.07□□□□□ -0.16
SYNE3-201ENST00000334258 ITGBL1O95965 494 aaPredicted RBP14.07□□□□□ -0.16
SYNE3-201ENST00000334258 GSRP00390 522 aa14.07□□□□□ -0.16
SYNE3-201ENST00000334258 THRAP10827 490 aa14.07□□□□□ -0.16
SYNE3-201ENST00000334258 PSMC3P17980 439 aa14.07□□□□□ -0.16
SYNE3-201ENST00000334258 GPD1P21695 349 aa14.07□□□□□ -0.16
SYNE3-201ENST00000334258 ACAT1P24752 427 aaKnown RBP14.07□□□□□ -0.16
SYNE3-201ENST00000334258 NAMPTP43490 491 aa14.07□□□□□ -0.16
SYNE3-201ENST00000334258 ADGRE1Q14246 886 aa14.07□□□□□ -0.16
SYNE3-201ENST00000334258 SLC9B1Q4ZJI4 515 aa14.07□□□□□ -0.16
SYNE3-201ENST00000334258 PPM1LQ5SGD2 360 aa14.07□□□□□ -0.16
SYNE3-201ENST00000334258 C9orf131Q5VYM1 1079 aa14.07□□□□□ -0.16
SYNE3-201ENST00000334258 BRSK2Q8IWQ3 736 aa14.07□□□□□ -0.16
SYNE3-201ENST00000334258 UBR7Q8N806 425 aa14.07□□□□□ -0.16
SYNE3-201ENST00000334258 ZNF781Q8N8C0 355 aa14.07□□□□□ -0.16
SYNE3-201ENST00000334258 WDR55Q9H6Y2 383 aaPredicted RBP14.07□□□□□ -0.16
SYNE3-201ENST00000334258 CAAP1Q9H8G2 361 aa14.07□□□□□ -0.16
SYNE3-201ENST00000334258 RNF146Q9NTX7 359 aa14.07□□□□□ -0.16
SYNE3-201ENST00000334258 COPG2Q9UBF2 871 aa14.07□□□□□ -0.16
SYNE3-201ENST00000334258 TMEM98Q9Y2Y6 226 aa14.07□□□□□ -0.16
SYNE3-201ENST00000334258 HEMK1Q9Y5R4 338 aaPredicted RBP14.07□□□□□ -0.16
SYNE3-201ENST00000334258 NR2E3Q9Y5X4 410 aa14.07□□□□□ -0.16
SYNE3-201ENST00000334258 STBD1O95210 358 aa14.07□□□□□ -0.16
SYNE3-201ENST00000334258 TNNC2P02585 160 aa14.07□□□□□ -0.16
SYNE3-201ENST00000334258 CNTFP26441 200 aa14.07□□□□□ -0.16
SYNE3-201ENST00000334258 ARRB2P32121 409 aa14.07□□□□□ -0.16
SYNE3-201ENST00000334258 ART3Q13508 389 aa14.07□□□□□ -0.16
SYNE3-201ENST00000334258 FKBP1CQ5VVH2 108 aa14.07□□□□□ -0.16
SYNE3-201ENST00000334258 C16orf89Q6UX73 402 aa14.07□□□□□ -0.16
SYNE3-201ENST00000334258 ATG14Q6ZNE5 492 aa14.07□□□□□ -0.16
SYNE3-201ENST00000334258 GADL1Q6ZQY3 521 aa14.07□□□□□ -0.16
SYNE3-201ENST00000334258 ADAM32Q8TC27 787 aa14.07□□□□□ -0.16
SYNE3-201ENST00000334258 NLRP7Q8WX94 980 aa14.07□□□□□ -0.16
SYNE3-201ENST00000334258 CNPY3Q9BT09 278 aa14.07□□□□□ -0.16
SYNE3-201ENST00000334258 TCF7L2Q9NQB0 619 aa14.07□□□□□ -0.16
SYNE3-201ENST00000334258 LOXHD1Q8IVV2 1947 aa14.07□□□□□ -0.16
SYNE3-201ENST00000334258 VWA5AO00534 786 aa14.07□□□□□ -0.16
SYNE3-201ENST00000334258 FBXO21O94952 628 aa14.07□□□□□ -0.16
SYNE3-201ENST00000334258 EDN1P05305 212 aa14.07□□□□□ -0.16
SYNE3-201ENST00000334258 AP3M2P53677 418 aa14.07□□□□□ -0.16
SYNE3-201ENST00000334258 PACS1Q6VY07 963 aa14.07□□□□□ -0.16
SYNE3-201ENST00000334258 CMC1Q7Z7K0 106 aa14.07□□□□□ -0.16
SYNE3-201ENST00000334258 ZNF410Q86VK4 478 aa14.07□□□□□ -0.16
SYNE3-201ENST00000334258 DSELQ8IZU8 1212 aa14.07□□□□□ -0.16
SYNE3-201ENST00000334258 TSPAN14Q8NG11 270 aa14.07□□□□□ -0.16
SYNE3-201ENST00000334258 ZSCAN18Q8TBC5 510 aaPredicted RBP14.07□□□□□ -0.16
SYNE3-201ENST00000334258 HEXIM2Q96MH2 286 aaKnown RBP14.07□□□□□ -0.16
SYNE3-201ENST00000334258 ANLNQ9NQW6 1124 aa14.07□□□□□ -0.16
SYNE3-201ENST00000334258 TUBGCP4Q9UGJ1 667 aa14.07□□□□□ -0.16
SYNE3-201ENST00000334258 PAIP2BQ9ULR5 123 aaKnown RBP14.07□□□□□ -0.16
SYNE3-201ENST00000334258 RBBP6Q7Z6E9 1792 aaKnown RBP14.06□□□□□ -0.16
SYNE3-201ENST00000334258 BTBD19C9JJ37 291 aa14.06□□□□□ -0.16
SYNE3-201ENST00000334258 CD1EP15812 388 aa14.06□□□□□ -0.16
SYNE3-201ENST00000334258 ZNF143P52747 638 aaPredicted RBP14.06□□□□□ -0.16
SYNE3-201ENST00000334258 CDKL1Q00532 357 aa14.06□□□□□ -0.16
SYNE3-201ENST00000334258 VGLL4Q14135 290 aa14.06□□□□□ -0.16
SYNE3-201ENST00000334258 LPIN1Q14693 890 aa14.06□□□□□ -0.16
SYNE3-201ENST00000334258 ZNF667Q5HYK9 610 aa14.06□□□□□ -0.16
SYNE3-201ENST00000334258 KRT80Q6KB66 452 aa14.06□□□□□ -0.16
SYNE3-201ENST00000334258 CES3Q6UWW8 571 aa14.06□□□□□ -0.16
SYNE3-201ENST00000334258 LPCAT2Q7L5N7 544 aa14.06□□□□□ -0.16
SYNE3-201ENST00000334258 ZNF554Q86TJ5 538 aa14.06□□□□□ -0.16
SYNE3-201ENST00000334258 CDR2LQ86X02 465 aaPredicted RBP14.06□□□□□ -0.16
SYNE3-201ENST00000334258 SLC4A11Q8NBS3 891 aa14.06□□□□□ -0.16
SYNE3-201ENST00000334258 MAML3Q96JK9 1138 aa14.06□□□□□ -0.16
SYNE3-201ENST00000334258 ZNF668Q96K58 619 aaPredicted RBP14.06□□□□□ -0.16
SYNE3-201ENST00000334258 OR52B2Q96RD2 323 aa14.06□□□□□ -0.16
SYNE3-201ENST00000334258 PKP2Q99959 881 aa14.06□□□□□ -0.16
SYNE3-201ENST00000334258 HAUS8Q9BT25 410 aa14.06□□□□□ -0.16
SYNE3-201ENST00000334258 PORCNQ9H237 461 aa14.06□□□□□ -0.16
SYNE3-201ENST00000334258 ZNF696Q9H7X3 374 aa14.06□□□□□ -0.16
SYNE3-201ENST00000334258 ARHGEF38Q9NXL2 777 aa14.06□□□□□ -0.16
SYNE3-201ENST00000334258 PSAT1Q9Y617 370 aa14.06□□□□□ -0.16
SYNE3-201ENST00000334258 A0A1B0GTW7 788 aa14.06□□□□□ -0.16
SYNE3-201ENST00000334258 LSM1O15116 133 aaKnown RBP14.06□□□□□ -0.16
SYNE3-201ENST00000334258 CDH2P19022 906 aaPredicted RBP14.06□□□□□ -0.16
SYNE3-201ENST00000334258 CNTN2Q02246 1040 aa14.06□□□□□ -0.16
SYNE3-201ENST00000334258 SH3D19Q5HYK7 790 aa14.06□□□□□ -0.16
SYNE3-201ENST00000334258 KLHL35Q6PF15 583 aa14.06□□□□□ -0.16
SYNE3-201ENST00000334258 TIFABQ6ZNK6 161 aa14.06□□□□□ -0.16
SYNE3-201ENST00000334258 VSIG10LQ86VR7 867 aa14.06□□□□□ -0.16
SYNE3-201ENST00000334258 ADCY4Q8NFM4 1077 aa14.06□□□□□ -0.16
SYNE3-201ENST00000334258 ACMSDQ8TDX5 336 aa14.06□□□□□ -0.16
SYNE3-201ENST00000334258 SREK1Q8WXA9 508 aaKnown RBP14.06□□□□□ -0.16
SYNE3-201ENST00000334258 KLRG1Q96E93 195 aa14.06□□□□□ -0.16
SYNE3-201ENST00000334258 TMA16Q96EY4 203 aaKnown RBP14.06□□□□□ -0.16
SYNE3-201ENST00000334258 RBM38Q9H0Z9 239 aaKnown RBP14.06□□□□□ -0.16
SYNE3-201ENST00000334258 LHX5Q9H2C1 402 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms