RNA–Protein interactions for RNA: ENST00000332772.4

SIMC1-201, Transcript of SUMO interacting motifs containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIMC1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1-201ENST00000332772 PCDHA11Q9Y5I1 949 aa9.3□□□□□ -0.92
SIMC1-201ENST00000332772 FAM169AQ9Y6X4 670 aa9.3□□□□□ -0.92
SIMC1-201ENST00000332772 GOLGA6L7A0A1B0GV03 622 aa9.29□□□□□ -0.92
SIMC1-201ENST00000332772 MAGEB16A2A368 324 aa9.29□□□□□ -0.92
SIMC1-201ENST00000332772 FAM159BA6NKW6 160 aa9.29□□□□□ -0.92
SIMC1-201ENST00000332772 FAM72CH0Y354 149 aa9.29□□□□□ -0.92
SIMC1-201ENST00000332772 TBC1D4O60343 1298 aa9.29□□□□□ -0.92
SIMC1-201ENST00000332772 CACNG3O60359 315 aa9.29□□□□□ -0.92
SIMC1-201ENST00000332772 B4GALT3O60512 393 aa9.29□□□□□ -0.92
SIMC1-201ENST00000332772 KRT37O76014 449 aa9.29□□□□□ -0.92
SIMC1-201ENST00000332772 KIAA0754O94854 1291 aa9.29□□□□□ -0.92
SIMC1-201ENST00000332772 LRIG2O94898 1065 aa9.29□□□□□ -0.92
SIMC1-201ENST00000332772 C1QAP02745 245 aa9.29□□□□□ -0.92
SIMC1-201ENST00000332772 CCNCP24863 283 aa9.29□□□□□ -0.92
SIMC1-201ENST00000332772 GARSP41250 739 aaKnown RBP9.29□□□□□ -0.92
SIMC1-201ENST00000332772 SLC18A2Q05940 514 aa9.29□□□□□ -0.92
SIMC1-201ENST00000332772 IFRD2Q12894 506 aaPredicted RBP9.29□□□□□ -0.92
SIMC1-201ENST00000332772 GPR17Q13304 367 aa9.29□□□□□ -0.92
SIMC1-201ENST00000332772 GPNMBQ14956 572 aa9.29□□□□□ -0.92
SIMC1-201ENST00000332772 SLC39A12Q504Y0 691 aa9.29□□□□□ -0.92
SIMC1-201ENST00000332772 FAM72AQ5TYM5 149 aa9.29□□□□□ -0.92
SIMC1-201ENST00000332772 TTC39BQ5VTQ0 682 aaPredicted RBP9.29□□□□□ -0.92
SIMC1-201ENST00000332772 C1orf53Q5VUE5 145 aa9.29□□□□□ -0.92
SIMC1-201ENST00000332772 FAM72DQ6L9T8 149 aa9.29□□□□□ -0.92
SIMC1-201ENST00000332772 ANKS3Q6ZW76 656 aa9.29□□□□□ -0.92
SIMC1-201ENST00000332772 SCD5Q86SK9 330 aa9.29□□□□□ -0.92
SIMC1-201ENST00000332772 FAM72BQ86X60 149 aa9.29□□□□□ -0.92
SIMC1-201ENST00000332772 IGDCC3Q8IVU1 814 aa9.29□□□□□ -0.92
SIMC1-201ENST00000332772 CCDC197Q8NCU1 140 aa9.29□□□□□ -0.92
SIMC1-201ENST00000332772 DBF4BQ8NFT6 615 aa9.29□□□□□ -0.92
SIMC1-201ENST00000332772 HASPINQ8TF76 798 aa9.29□□□□□ -0.92
SIMC1-201ENST00000332772 EDEM1Q92611 657 aa9.29□□□□□ -0.92
SIMC1-201ENST00000332772 DPF3Q92784 378 aa9.29□□□□□ -0.92
SIMC1-201ENST00000332772 CABS1Q96KC9 395 aa9.29□□□□□ -0.92
SIMC1-201ENST00000332772 TMEM209Q96SK2 561 aa9.29□□□□□ -0.92
SIMC1-201ENST00000332772 LGMNQ99538 433 aa9.29□□□□□ -0.92
SIMC1-201ENST00000332772 MAGEB5Q9BZ81 275 aa9.29□□□□□ -0.92
SIMC1-201ENST00000332772 MOCS1Q9NZB8 636 aa9.29□□□□□ -0.92
SIMC1-201ENST00000332772 TLR6Q9Y2C9 796 aa9.29□□□□□ -0.92
SIMC1-201ENST00000332772 TTLL3Q9Y4R7 772 aa9.29□□□□□ -0.92
SIMC1-201ENST00000332772 FNDC1Q4ZHG4 1894 aaPredicted RBP9.28□□□□□ -0.92
SIMC1-201ENST00000332772 SYNJ2BP-COX16A0A087WUM0 186 aa9.28□□□□□ -0.92
SIMC1-201ENST00000332772 KCNU1A8MYU2 1149 aa9.28□□□□□ -0.92
SIMC1-201ENST00000332772 I6L893 689 aaPredicted RBP9.28□□□□□ -0.92
SIMC1-201ENST00000332772 BANF1O75531 89 aa9.28□□□□□ -0.92
SIMC1-201ENST00000332772 KRT38O76015 456 aa9.28□□□□□ -0.92
SIMC1-201ENST00000332772 SNRPAP09012 282 aaKnown RBP9.28□□□□□ -0.92
SIMC1-201ENST00000332772 CREB1P16220 341 aa9.28□□□□□ -0.92
SIMC1-201ENST00000332772 PTPN3P26045 913 aa9.28□□□□□ -0.92
SIMC1-201ENST00000332772 EPHB2P29323 1055 aa9.28□□□□□ -0.92
SIMC1-201ENST00000332772 IFNAR2P48551 515 aa9.28□□□□□ -0.92
SIMC1-201ENST00000332772 KPNA1P52294 538 aaPredicted RBP9.28□□□□□ -0.92
SIMC1-201ENST00000332772 NRLP54845 237 aa9.28□□□□□ -0.92
SIMC1-201ENST00000332772 MPP2Q14168 576 aa9.28□□□□□ -0.92
SIMC1-201ENST00000332772 KBTBD12Q3ZCT8 623 aa9.28□□□□□ -0.92
SIMC1-201ENST00000332772 CTXN3Q4LDR2 81 aa9.28□□□□□ -0.92
SIMC1-201ENST00000332772 TEX44Q53QW1 395 aa9.28□□□□□ -0.92
SIMC1-201ENST00000332772 HP1BP3Q5SSJ5 553 aaPredicted RBP9.28□□□□□ -0.92
SIMC1-201ENST00000332772 TIFABQ6ZNK6 161 aa9.28□□□□□ -0.92
SIMC1-201ENST00000332772 CCDC117Q8IWD4 279 aaPredicted RBP9.28□□□□□ -0.92
SIMC1-201ENST00000332772 ZNF567Q8N184 647 aa9.28□□□□□ -0.92
SIMC1-201ENST00000332772 CCNYQ8ND76 341 aa9.28□□□□□ -0.92
SIMC1-201ENST00000332772 SCAMP5Q8TAC9 235 aa9.28□□□□□ -0.92
SIMC1-201ENST00000332772 RNF34Q969K3 372 aa9.28□□□□□ -0.92
SIMC1-201ENST00000332772 TBC1D31Q96DN5 1066 aa9.28□□□□□ -0.92
SIMC1-201ENST00000332772 STAMBPL1Q96FJ0 436 aa9.28□□□□□ -0.92
SIMC1-201ENST00000332772 SLC39A13Q96H72 371 aa9.28□□□□□ -0.92
SIMC1-201ENST00000332772 CDK5RAP1Q96SZ6 601 aaKnown RBP9.28□□□□□ -0.92
SIMC1-201ENST00000332772 TMEM106CQ9BVX2 250 aa9.28□□□□□ -0.92
SIMC1-201ENST00000332772 RHOBTB2Q9BYZ6 727 aa9.28□□□□□ -0.92
SIMC1-201ENST00000332772 ANLNQ9NQW6 1124 aa9.28□□□□□ -0.92
SIMC1-201ENST00000332772 COX16Q9P0S2 106 aa9.28□□□□□ -0.92
SIMC1-201ENST00000332772 HSFX1Q9UBD0 423 aa9.28□□□□□ -0.92
SIMC1-201ENST00000332772 GREB1Q4ZG55 1949 aa9.28□□□□□ -0.92
SIMC1-201ENST00000332772 AP2A1O95782 977 aa9.28□□□□□ -0.92
SIMC1-201ENST00000332772 MT-ND3P03897 115 aa9.28□□□□□ -0.92
SIMC1-201ENST00000332772 VIMP08670 466 aaKnown RBP9.28□□□□□ -0.92
SIMC1-201ENST00000332772 PGAM1P18669 254 aa9.28□□□□□ -0.92
SIMC1-201ENST00000332772 NPY2RP49146 381 aa9.28□□□□□ -0.92
SIMC1-201ENST00000332772 MLLT6P55198 1093 aaPredicted RBP9.28□□□□□ -0.92
SIMC1-201ENST00000332772 RPL10AP62906 217 aaKnown RBP9.28□□□□□ -0.92
SIMC1-201ENST00000332772 PDK4Q16654 411 aa9.28□□□□□ -0.92
SIMC1-201ENST00000332772 AFMIDQ63HM1 303 aa9.28□□□□□ -0.92
SIMC1-201ENST00000332772 KCTD11Q693B1 232 aa9.28□□□□□ -0.92
SIMC1-201ENST00000332772 TIGD7Q6NT04 549 aaPredicted RBP9.28□□□□□ -0.92
SIMC1-201ENST00000332772 UNC5AQ6ZN44 842 aa9.28□□□□□ -0.92
SIMC1-201ENST00000332772 DENND5BQ6ZUT9 1274 aa9.28□□□□□ -0.92
SIMC1-201ENST00000332772 PID1Q7Z2X4 250 aa9.28□□□□□ -0.92
SIMC1-201ENST00000332772 LINC00523Q86TU6 105 aa9.28□□□□□ -0.92
SIMC1-201ENST00000332772 LRRC34Q8IZ02 419 aa9.28□□□□□ -0.92
SIMC1-201ENST00000332772 AGGF1Q8N302 714 aaeCLIP9.28□□□□□ -0.92
SIMC1-201ENST00000332772 LRRC43Q8N309 656 aa9.28□□□□□ -0.92
SIMC1-201ENST00000332772 BANPQ8N9N5 519 aa9.28□□□□□ -0.92
SIMC1-201ENST00000332772 ADAM32Q8TC27 787 aa9.28□□□□□ -0.92
SIMC1-201ENST00000332772 CDKL2Q92772 493 aa9.28□□□□□ -0.92
SIMC1-201ENST00000332772 TEKT5Q96M29 485 aa9.28□□□□□ -0.92
SIMC1-201ENST00000332772 GBA3Q9H227 469 aa9.28□□□□□ -0.92
SIMC1-201ENST00000332772 VPS11Q9H270 941 aa9.28□□□□□ -0.92
SIMC1-201ENST00000332772 KDM4CQ9H3R0 1056 aa9.28□□□□□ -0.92
SIMC1-201ENST00000332772 TMPRSS4Q9NRS4 437 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms