RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 MAGEC3Q8TD91 643 aa15.26■□□□□ 0.03
CLCNKA-201ENST00000331433 AGAP11Q8TF27 550 aa15.26■□□□□ 0.03
CLCNKA-201ENST00000331433 PADI3Q9ULW8 664 aa15.26■□□□□ 0.03
CLCNKA-201ENST00000331433 L3MBTL1Q9Y468 752 aa15.26■□□□□ 0.03
CLCNKA-201ENST00000331433 PTCH2Q9Y6C5 1203 aa15.26■□□□□ 0.03
CLCNKA-201ENST00000331433 FAM237BA0A1B0GVD1 139 aa15.26■□□□□ 0.03
CLCNKA-201ENST00000331433 KPNA6O60684 536 aa15.26■□□□□ 0.03
CLCNKA-201ENST00000331433 PCSK1P29120 753 aa15.26■□□□□ 0.03
CLCNKA-201ENST00000331433 SERPINB3P29508 390 aa15.26■□□□□ 0.03
CLCNKA-201ENST00000331433 CHI3L2Q15782 390 aa15.26■□□□□ 0.03
CLCNKA-201ENST00000331433 MARK2Q7KZI7 788 aaKnown RBP15.26■□□□□ 0.03
CLCNKA-201ENST00000331433 OR52K1Q8NGK4 314 aa15.26■□□□□ 0.03
CLCNKA-201ENST00000331433 APBB2Q92870 758 aa15.26■□□□□ 0.03
CLCNKA-201ENST00000331433 TMLHEQ9NVH6 421 aa15.26■□□□□ 0.03
CLCNKA-201ENST00000331433 MKS1Q9NXB0 559 aa15.26■□□□□ 0.03
CLCNKA-201ENST00000331433 IGSF9Q9P2J2 1179 aa15.26■□□□□ 0.03
CLCNKA-201ENST00000331433 INPP5FQ9Y2H2 1132 aa15.26■□□□□ 0.03
CLCNKA-201ENST00000331433 KLF11O14901 512 aa15.25■□□□□ 0.03
CLCNKA-201ENST00000331433 GPR182O15218 404 aa15.25■□□□□ 0.03
CLCNKA-201ENST00000331433 TGDSO95455 350 aa15.25■□□□□ 0.03
CLCNKA-201ENST00000331433 ALDOAP04075 364 aaKnown RBP15.25■□□□□ 0.03
CLCNKA-201ENST00000331433 SLC8A1P32418 973 aa15.25■□□□□ 0.03
CLCNKA-201ENST00000331433 CRHR1P34998 444 aa15.25■□□□□ 0.03
CLCNKA-201ENST00000331433 RGMBQ6NW40 437 aa15.25■□□□□ 0.03
CLCNKA-201ENST00000331433 PACS1Q6VY07 963 aa15.25■□□□□ 0.03
CLCNKA-201ENST00000331433 CYS1Q717R9 158 aa15.25■□□□□ 0.03
CLCNKA-201ENST00000331433 NUDCD3Q8IVD9 361 aa15.25■□□□□ 0.03
CLCNKA-201ENST00000331433 E2F7Q96AV8 911 aa15.25■□□□□ 0.03
CLCNKA-201ENST00000331433 TMEM209Q96SK2 561 aa15.25■□□□□ 0.03
CLCNKA-201ENST00000331433 TKTL2Q9H0I9 626 aa15.25■□□□□ 0.03
CLCNKA-201ENST00000331433 WDCPQ9H6R7 721 aa15.25■□□□□ 0.03
CLCNKA-201ENST00000331433 XPNPEP3Q9NQH7 507 aa15.25■□□□□ 0.03
CLCNKA-201ENST00000331433 GABRQQ9UN88 632 aa15.25■□□□□ 0.03
CLCNKA-201ENST00000331433 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.25■□□□□ 0.03
CLCNKA-201ENST00000331433 F8W810 466 aa15.25■□□□□ 0.03
CLCNKA-201ENST00000331433 ERVK-10P10266 1014 aa15.25■□□□□ 0.03
CLCNKA-201ENST00000331433 MYL2P10916 166 aa15.25■□□□□ 0.03
CLCNKA-201ENST00000331433 ODC1P11926 461 aa15.25■□□□□ 0.03
CLCNKA-201ENST00000331433 RPL9P32969 192 aaKnown RBP15.25■□□□□ 0.03
CLCNKA-201ENST00000331433 AIF1P55008 147 aa15.25■□□□□ 0.03
CLCNKA-201ENST00000331433 ARL13BQ3SXY8 428 aa15.25■□□□□ 0.03
CLCNKA-201ENST00000331433 SAPCD2Q86UD0 394 aa15.25■□□□□ 0.03
CLCNKA-201ENST00000331433 TAC4Q86UU9 113 aa15.25■□□□□ 0.03
CLCNKA-201ENST00000331433 STKLD1Q8NE28 680 aa15.25■□□□□ 0.03
CLCNKA-201ENST00000331433 CDKL2Q92772 493 aa15.25■□□□□ 0.03
CLCNKA-201ENST00000331433 PGAP3Q96FM1 320 aaPredicted RBP15.25■□□□□ 0.03
CLCNKA-201ENST00000331433 SIRPGQ9P1W8 387 aa15.25■□□□□ 0.03
CLCNKA-201ENST00000331433 OR12D3Q9UGF7 316 aa15.25■□□□□ 0.03
CLCNKA-201ENST00000331433 MAGED2Q9UNF1 606 aaPredicted RBP15.25■□□□□ 0.03
CLCNKA-201ENST00000331433 RPS6KL1Q9Y6S9 549 aa15.25■□□□□ 0.03
CLCNKA-201ENST00000331433 TPP1O14773 563 aa15.24■□□□□ 0.03
CLCNKA-201ENST00000331433 ZBTB24O43167 697 aaPredicted RBP15.24■□□□□ 0.03
CLCNKA-201ENST00000331433 F7P08709 466 aaPredicted RBP15.24■□□□□ 0.03
CLCNKA-201ENST00000331433 EPHB2P29323 1055 aa15.24■□□□□ 0.03
CLCNKA-201ENST00000331433 ZBTB16Q05516 673 aa15.24■□□□□ 0.03
CLCNKA-201ENST00000331433 PPIDQ08752 370 aaKnown RBP15.24■□□□□ 0.03
CLCNKA-201ENST00000331433 ZBTB17Q13105 803 aa15.24■□□□□ 0.03
CLCNKA-201ENST00000331433 C16orf46Q6P387 395 aa15.24■□□□□ 0.03
CLCNKA-201ENST00000331433 ZCCHC23Q6ZST2 131 aa15.24■□□□□ 0.03
CLCNKA-201ENST00000331433 PDZD4Q76G19 769 aaPredicted RBP15.24■□□□□ 0.03
CLCNKA-201ENST00000331433 MRPL10Q7Z7H8 261 aaKnown RBP15.24■□□□□ 0.03
CLCNKA-201ENST00000331433 TTC7BQ86TV6 843 aa15.24■□□□□ 0.03
CLCNKA-201ENST00000331433 RAB3IPQ96QF0 476 aaPredicted RBP15.24■□□□□ 0.03
CLCNKA-201ENST00000331433 TBC1D10AQ9BXI6 508 aa15.24■□□□□ 0.03
CLCNKA-201ENST00000331433 CSNK1G1Q9HCP0 422 aa15.24■□□□□ 0.03
CLCNKA-201ENST00000331433 MARCOQ9UEW3 520 aaPredicted RBP15.24■□□□□ 0.03
CLCNKA-201ENST00000331433 LRIG2O94898 1065 aa15.24■□□□□ 0.03
CLCNKA-201ENST00000331433 ITGB1P05556 798 aa15.24■□□□□ 0.03
CLCNKA-201ENST00000331433 YY1P25490 414 aa15.24■□□□□ 0.03
CLCNKA-201ENST00000331433 CD68P34810 354 aaPredicted RBP15.24■□□□□ 0.03
CLCNKA-201ENST00000331433 TEX44Q53QW1 395 aa15.24■□□□□ 0.03
CLCNKA-201ENST00000331433 CD300LGQ6UXG3 332 aa15.24■□□□□ 0.03
CLCNKA-201ENST00000331433 TIFABQ6ZNK6 161 aa15.24■□□□□ 0.03
CLCNKA-201ENST00000331433 LRRTM3Q86VH5 581 aa15.24■□□□□ 0.03
CLCNKA-201ENST00000331433 RASSF3Q86WH2 238 aa15.24■□□□□ 0.03
CLCNKA-201ENST00000331433 OR10T2Q8NGX3 314 aa15.24■□□□□ 0.03
CLCNKA-201ENST00000331433 SCAMP5Q8TAC9 235 aa15.24■□□□□ 0.03
CLCNKA-201ENST00000331433 INPP5DQ92835 1189 aa15.24■□□□□ 0.03
CLCNKA-201ENST00000331433 SKA1Q96BD8 255 aa15.24■□□□□ 0.03
CLCNKA-201ENST00000331433 CELF6Q96J87 481 aaKnown RBP15.24■□□□□ 0.03
CLCNKA-201ENST00000331433 FCRL3Q96P31 734 aaPredicted RBP15.24■□□□□ 0.03
CLCNKA-201ENST00000331433 C20orf27Q9GZN8 174 aa15.24■□□□□ 0.03
CLCNKA-201ENST00000331433 ZFATQ9P243 1243 aa15.24■□□□□ 0.03
CLCNKA-201ENST00000331433 MTO1Q9Y2Z2 717 aaKnown RBP15.24■□□□□ 0.03
CLCNKA-201ENST00000331433 HAUS5O94927 633 aa15.23■□□□□ 0.03
CLCNKA-201ENST00000331433 IL1BP01584 269 aa15.23■□□□□ 0.03
CLCNKA-201ENST00000331433 ASGR1P07306 291 aa15.23■□□□□ 0.03
CLCNKA-201ENST00000331433 KITP10721 976 aa15.23■□□□□ 0.03
CLCNKA-201ENST00000331433 GMPRP36959 345 aa15.23■□□□□ 0.03
CLCNKA-201ENST00000331433 CXCR3P49682 368 aa15.23■□□□□ 0.03
CLCNKA-201ENST00000331433 PREPLQ4J6C6 727 aaPredicted RBP15.23■□□□□ 0.03
CLCNKA-201ENST00000331433 INTS6LQ5JSJ4 861 aaKnown RBP15.23■□□□□ 0.03
CLCNKA-201ENST00000331433 LONP2Q86WA8 852 aa15.23■□□□□ 0.03
CLCNKA-201ENST00000331433 CCNJLQ8IV13 435 aa15.23■□□□□ 0.03
CLCNKA-201ENST00000331433 ARID3BQ8IVW6 561 aaPredicted RBP15.23■□□□□ 0.03
CLCNKA-201ENST00000331433 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.23■□□□□ 0.03
CLCNKA-201ENST00000331433 RNF34Q969K3 372 aa15.23■□□□□ 0.03
CLCNKA-201ENST00000331433 ZIC5Q96T25 663 aa15.23■□□□□ 0.03
CLCNKA-201ENST00000331433 APOL2Q9BQE5 337 aa15.23■□□□□ 0.03
CLCNKA-201ENST00000331433 SPC25Q9HBM1 224 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms