RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 ACMSDQ8TDX5 336 aa18.57■□□□□ 0.56
CLSTN3-202ENST00000331148 NLRP7Q8WX94 980 aa18.57■□□□□ 0.56
CLSTN3-202ENST00000331148 ZBTB45Q96K62 511 aaPredicted RBP18.57■□□□□ 0.56
CLSTN3-202ENST00000331148 CCT7Q99832 543 aa18.57■□□□□ 0.56
CLSTN3-202ENST00000331148 EBNA1BP2Q99848 306 aaKnown RBP18.57■□□□□ 0.56
CLSTN3-202ENST00000331148 INO80BQ9C086 356 aaPredicted RBP18.57■□□□□ 0.56
CLSTN3-202ENST00000331148 TUBGCP4Q9UGJ1 667 aa18.57■□□□□ 0.56
CLSTN3-202ENST00000331148 USP18Q9UMW8 372 aa18.57■□□□□ 0.56
CLSTN3-202ENST00000331148 TPP1O14773 563 aa18.56■□□□□ 0.56
CLSTN3-202ENST00000331148 AIM2O14862 343 aa18.56■□□□□ 0.56
CLSTN3-202ENST00000331148 ASS1P00966 412 aaKnown RBP18.56■□□□□ 0.56
CLSTN3-202ENST00000331148 CAPNS1P04632 268 aa18.56■□□□□ 0.56
CLSTN3-202ENST00000331148 PRKCGP05129 697 aa18.56■□□□□ 0.56
CLSTN3-202ENST00000331148 THRAP10827 490 aa18.56■□□□□ 0.56
CLSTN3-202ENST00000331148 PSMC3P17980 439 aa18.56■□□□□ 0.56
CLSTN3-202ENST00000331148 MAGEA3P43357 314 aa18.56■□□□□ 0.56
CLSTN3-202ENST00000331148 ALDH3B2P48448 385 aa18.56■□□□□ 0.56
CLSTN3-202ENST00000331148 PHEXP78562 749 aa18.56■□□□□ 0.56
CLSTN3-202ENST00000331148 ACAP1Q15027 740 aa18.56■□□□□ 0.56
CLSTN3-202ENST00000331148 CYTH1Q15438 398 aa18.56■□□□□ 0.56
CLSTN3-202ENST00000331148 C16orf89Q6UX73 402 aa18.56■□□□□ 0.56
CLSTN3-202ENST00000331148 ZNF534Q76KX8 674 aa18.56■□□□□ 0.56
CLSTN3-202ENST00000331148 CHERPQ8IWX8 916 aaKnown RBP18.56■□□□□ 0.56
CLSTN3-202ENST00000331148 MCPH1Q8NEM0 835 aa18.56■□□□□ 0.56
CLSTN3-202ENST00000331148 TMIGD2Q96BF3 282 aa18.56■□□□□ 0.56
CLSTN3-202ENST00000331148 SIGLEC10Q96LC7 697 aa18.56■□□□□ 0.56
CLSTN3-202ENST00000331148 LENG8Q96PV6 779 aaPredicted RBP18.56■□□□□ 0.56
CLSTN3-202ENST00000331148 PLGRKTQ9HBL7 147 aa18.56■□□□□ 0.56
CLSTN3-202ENST00000331148 MAN1C1Q9NR34 630 aa18.56■□□□□ 0.56
CLSTN3-202ENST00000331148 CYTH4Q9UIA0 394 aa18.56■□□□□ 0.56
CLSTN3-202ENST00000331148 WDR37Q9Y2I8 494 aa18.56■□□□□ 0.56
CLSTN3-202ENST00000331148 PCDHA11Q9Y5I1 949 aa18.56■□□□□ 0.56
CLSTN3-202ENST00000331148 PRSS51A0A1B0GVH4 220 aa18.56■□□□□ 0.56
CLSTN3-202ENST00000331148 SOWAHBA6NEL2 793 aa18.56■□□□□ 0.56
CLSTN3-202ENST00000331148 H0YCG3 227 aa18.56■□□□□ 0.56
CLSTN3-202ENST00000331148 GTF2A2P52657 109 aa18.56■□□□□ 0.56
CLSTN3-202ENST00000331148 ZNF423Q2M1K9 1284 aa18.56■□□□□ 0.56
CLSTN3-202ENST00000331148 FAM47CQ5HY64 1035 aa18.56■□□□□ 0.56
CLSTN3-202ENST00000331148 PACS1Q6VY07 963 aa18.56■□□□□ 0.56
CLSTN3-202ENST00000331148 BNC2Q6ZN30 1099 aaPredicted RBP18.56■□□□□ 0.56
CLSTN3-202ENST00000331148 TRIML2Q8N7C3 387 aa18.56■□□□□ 0.56
CLSTN3-202ENST00000331148 MCUQ8NE86 351 aa18.56■□□□□ 0.56
CLSTN3-202ENST00000331148 RSPH1Q8WYR4 309 aa18.56■□□□□ 0.56
CLSTN3-202ENST00000331148 PEBP4Q96S96 227 aa18.56■□□□□ 0.56
CLSTN3-202ENST00000331148 COG4Q9H9E3 785 aa18.56■□□□□ 0.56
CLSTN3-202ENST00000331148 PDLIM7Q9NR12 457 aa18.56■□□□□ 0.56
CLSTN3-202ENST00000331148 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.56■□□□□ 0.56
CLSTN3-202ENST00000331148 ARID2Q68CP9 1835 aa18.56■□□□□ 0.56
CLSTN3-202ENST00000331148 CD1EP15812 388 aa18.55■□□□□ 0.56
CLSTN3-202ENST00000331148 RBL1P28749 1068 aa18.55■□□□□ 0.56
CLSTN3-202ENST00000331148 ICAM3P32942 547 aa18.55■□□□□ 0.56
CLSTN3-202ENST00000331148 STT3AP46977 705 aa18.55■□□□□ 0.56
CLSTN3-202ENST00000331148 CDH6P55285 790 aa18.55■□□□□ 0.56
CLSTN3-202ENST00000331148 FSTL1Q12841 308 aa18.55■□□□□ 0.56
CLSTN3-202ENST00000331148 TFDP2Q14188 446 aa18.55■□□□□ 0.56
CLSTN3-202ENST00000331148 EPGNQ6UW88 154 aa18.55■□□□□ 0.56
CLSTN3-202ENST00000331148 BHLHE22Q8NFJ8 381 aaPredicted RBP18.55■□□□□ 0.56
CLSTN3-202ENST00000331148 MS4A4AQ96JQ5 239 aa18.55■□□□□ 0.56
CLSTN3-202ENST00000331148 MSTO1Q9BUK6 570 aa18.55■□□□□ 0.56
CLSTN3-202ENST00000331148 R3HDMLQ9H3Y0 253 aa18.55■□□□□ 0.56
CLSTN3-202ENST00000331148 JPH1Q9HDC5 661 aaPredicted RBP18.55■□□□□ 0.56
CLSTN3-202ENST00000331148 SLC17A6Q9P2U8 582 aa18.55■□□□□ 0.56
CLSTN3-202ENST00000331148 RNF11Q9Y3C5 154 aa18.55■□□□□ 0.56
CLSTN3-202ENST00000331148 DGAT1O75907 488 aa18.54■□□□□ 0.56
CLSTN3-202ENST00000331148 CELF2O95319 508 aaKnown RBP18.54■□□□□ 0.56
CLSTN3-202ENST00000331148 CST3P01034 146 aaPredicted RBP18.54■□□□□ 0.56
CLSTN3-202ENST00000331148 RALBP11234 206 aa18.54■□□□□ 0.56
CLSTN3-202ENST00000331148 ADORA2AP29274 412 aa18.54■□□□□ 0.56
CLSTN3-202ENST00000331148 MPP3Q13368 585 aa18.54■□□□□ 0.56
CLSTN3-202ENST00000331148 SLC9B1Q4ZJI4 515 aa18.54■□□□□ 0.56
CLSTN3-202ENST00000331148 PIGGQ5H8A4 983 aa18.54■□□□□ 0.56
CLSTN3-202ENST00000331148 GTF3C2Q8WUA4 911 aaPredicted RBP18.54■□□□□ 0.56
CLSTN3-202ENST00000331148 ATP2A3Q93084 1043 aa18.54■□□□□ 0.56
CLSTN3-202ENST00000331148 ZNF512Q96ME7 567 aaPredicted RBP18.54■□□□□ 0.56
CLSTN3-202ENST00000331148 CDRT15Q96T59 188 aa18.54■□□□□ 0.56
CLSTN3-202ENST00000331148 RNPEPQ9H4A4 650 aa18.54■□□□□ 0.56
CLSTN3-202ENST00000331148 MROH8Q9H579 483 aa18.54■□□□□ 0.56
CLSTN3-202ENST00000331148 RRN3Q9NYV6 651 aa18.54■□□□□ 0.56
CLSTN3-202ENST00000331148 GABBR1Q9UBS5 961 aa18.54■□□□□ 0.56
CLSTN3-202ENST00000331148 BCAP29Q9UHQ4 241 aa18.54■□□□□ 0.56
CLSTN3-202ENST00000331148 ENDOD1O94919 500 aa18.54■□□□□ 0.56
CLSTN3-202ENST00000331148 STBD1O95210 358 aa18.54■□□□□ 0.56
CLSTN3-202ENST00000331148 ZBED1O96006 694 aa18.54■□□□□ 0.56
CLSTN3-202ENST00000331148 CYP2C8P10632 490 aa18.54■□□□□ 0.56
CLSTN3-202ENST00000331148 EDNRBP24530 442 aa18.54■□□□□ 0.56
CLSTN3-202ENST00000331148 PIK3R1P27986 724 aa18.54■□□□□ 0.56
CLSTN3-202ENST00000331148 SERPINB5P36952 375 aa18.54■□□□□ 0.56
CLSTN3-202ENST00000331148 ENTPD1P49961 510 aa18.54■□□□□ 0.56
CLSTN3-202ENST00000331148 YWHAEP62258 255 aaKnown RBP18.54■□□□□ 0.56
CLSTN3-202ENST00000331148 KCTD2Q14681 263 aa18.54■□□□□ 0.56
CLSTN3-202ENST00000331148 SNX32Q86XE0 403 aa18.54■□□□□ 0.56
CLSTN3-202ENST00000331148 DSELQ8IZU8 1212 aa18.54■□□□□ 0.56
CLSTN3-202ENST00000331148 KYQ8NBH2 561 aa18.54■□□□□ 0.56
CLSTN3-202ENST00000331148 OSBPL6Q9BZF3 934 aa18.54■□□□□ 0.56
CLSTN3-202ENST00000331148 NIF3L1Q9GZT8 377 aa18.54■□□□□ 0.56
CLSTN3-202ENST00000331148 CDH19Q9H159 772 aa18.54■□□□□ 0.56
CLSTN3-202ENST00000331148 XPNPEP3Q9NQH7 507 aa18.54■□□□□ 0.56
CLSTN3-202ENST00000331148 INIPQ9NRY2 104 aa18.54■□□□□ 0.56
CLSTN3-202ENST00000331148 COPG2Q9UBF2 871 aa18.54■□□□□ 0.56
CLSTN3-202ENST00000331148 DCDC2Q9UHG0 476 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms